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Polysaccharide Sequence Influences the Specificity and Catalytic Activity of Glucuronyl C5-Epimerase.
Biochemistry ( IF 2.9 ) Pub Date : 2020-06-24 , DOI: 10.1021/acs.biochem.0c00419
Deepika Vaidyanathan , Xia Ke , Yanlei Yu , Robert J. Linhardt , Jonathan S. Dordick

Heparin is a widely used biotherapeutic produced from animal tissues. However, it might be possible to produce a bioengineered version using a multienzyme process, relying on the isolation of the E. coli K5 capsule heparosan and its chemical conversion to N-sulfoheparosan, NSH. Glucuronyl C5-epimerase, the first enzyme that acts on NSH, catalyzes the reversible conversion of glucuronic acid (GlcA) to iduronic acid (IdoA). Using full-length NSH, containing different amounts of N-acetylglucosamine (GlcNAc) residues, we demonstrate that C5-epimerase specificity relates to polysaccharide sequence, particularly the location of GlcNAc residues within the chain. We leveraged the deuterium exchange and the novel β-glucuronidase heparanase BP, which cleaves at the GlcA residue. Liquid chromatography–mass spectrometry and gel permeation chromatography of partial/complete heparanase BP digestion products from various NSH substrates treated with C5-epimerase provide information on C5-epimerase activity and action pattern. This study provides insight into optimizing the large-scale production of bioengineered heparin.

中文翻译:

多糖序列影响葡萄糖醛酸C5-表异构酶的特异性和催化活性。

肝素是从动物组织生产的一种广泛使用的生物治疗剂。但是,依靠分离大肠杆菌K5胶囊肝素及其化学转化成N-硫杂庚烷(NSH)的方法,可以使用多酶工艺生产生物工程版本。最早作用于NSH的酶葡糖醛酸C5-表异构酶催化葡糖醛酸(GlcA)向艾杜糖酸(IdoA)的可逆转化。使用全长NSH,其中包含不同量的N-乙酰基葡糖胺(GlcNAc)残基,我们证明了C5-表异构酶的特异性与多糖序列有关,特别是GlcNAc残基在链中的位置。我们利用氘交换和新的β-葡萄糖醛酸苷酶乙酰肝素酶BP,其在GlcA残基处裂解。部分或完全的乙酰肝素酶BP消化产物的液相色谱-质谱分析和凝胶渗透色谱分析表明,这些NSH底物经C5-表异构酶处理后,可提供有关C5-表异构酶活性和作用方式的信息。该研究为优化生物工程肝素的大规模生产提供了见识。
更新日期:2020-07-14
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