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Polyphasic taxonomic analysis of Nitratireductor arenosus sp. nov., isolated from sea sand.
FEMS Microbiology Letters ( IF 2.2 ) Pub Date : 2020-06-24 , DOI: 10.1093/femsle/fnaa104
Jihye Baek 1 , Jong-Hwa Kim 1 , Jiseon Jeong 1 , Jung-Hoon Yoon 2 , Ampaitip Sukhoom 3 , Wonyong Kim 1
Affiliation  

A novel proteobacterial bacterium, designated strain CAU 1489T, was isolated from Jeju Island, Republic of Korea. Cells were strictly anaerobic, Gram stain-negative, cream-pigmented, non-spore-forming, motile and short rod-shaped. Strain CAU 1489T exhibited the highest 16S rRNA gene sequence similarity (98.2%) to Nitratireductor mangrovi SY7T. Multilocus sequence analysis of 16S rRNA and four housekeeping genes (rpoB, rpoC, gyrB and dnaK) indicated that CAU 1489T represents a distinct branch within Nitratireductor. The whole genome was 4.8 Mb with a G + C content of 64.7 mol%, including protein-coding genes related to the function terms amino acids and derivatives, nucleotides and nucleosides, protein metabolism, carbohydrates and cofactors, vitamins, prosthetic groups and pigments. The major fatty acids were 11-methyl C18:1ω7c, cyclo- C19:0ω8c, iso-C17:0 and summed feature 8 (C18:1ω6c and/or C18:1ω7c), and the predominant respiratory quinone was Q-10. The polar lipids comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and two unidentified phospholipids. Digital DNA–DNA hybridization and average nucleotide identity values were 19.4–22.0% and 72.4–79.1%, respectively. On the basis of taxonomic characterization, strain CAU 1489T constitutes a novel species, for which the name Nitratireductor arenosus sp. nov. is proposed. The type strain is CAU 1489T ( = KCTC 62997T = NBRC 113694T).

中文翻译:

Nitratireductor arenosus sp。的多相分类学分析。十一月。,与海沙隔离。

一种新颖的变形杆菌细菌,指定应变CAU 1489 Ť,从济州岛,大韩民国隔离。细胞严格厌氧,革兰氏染色阴性,霜状色素,无孢子形成,能动和短杆状。菌株CAU 1489 T硝酸还原酶mangrovi SY7 T表现出最高的16S rRNA基因序列相似性(98.2%)。16S rRNA和四个管家基因(rpo B,rpo C,gyr B和dna K)的多基因座序列分析表明,CAU 1489 T代表硝化还原酶内的一个独特分支。整个基因组为4.8 Mb,G + C含量为64.7 mol%,包括与功能术语氨基酸和衍生物,核苷酸和核苷,蛋白质代谢,碳水化合物和辅因子,维生素,辅基和色素有关的蛋白质编码基因。的主要脂肪酸为11-甲基Ç 18:1个ω 7 Ç,环Ç 19:0 ω 8 Ç,异-C 17:0和求和特征8(C 18:1个ω 6 ç和/或C 18: 1和ω 7 ç),主要的呼吸醌为Q-10。极性脂质包括二磷脂酰甘油,磷脂酰甘油,磷脂酰乙醇胺和两种未鉴定的磷脂。数字DNA–DNA杂交和平均核苷酸同一性值分别为19.4–22.0%和72.4–79.1%。根据分类学特征,菌株CAU 1489 T构成了一个新物种,其名称为Nitratireductor arenosus sp。十一月 被提议。类型应变为CAU 1489 T(= KCTC 62997 T  = NBRC 113694 T)。
更新日期:2020-07-07
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