Plant, soil, and aquatic microbiomes interact, but scientists often study them independently. Integrating knowledge across these traditionally separate subdisciplines will generate better understanding of microbial ecological properties. Interactions among plant, soil, and aquatic microbiomes, as well as anthropogenic factors, influence important ecosystem processes, including greenhouse gas fluxes, crop production, nonnative species control, and nutrient flux from terrestrial to aquatic habitats. Terrestrial microbiomes influence nutrient retention and particle movement, thereby influencing the composition and functioning of aquatic microbiomes, which, themselves, govern water quality, and the potential for harmful algal blooms. Understanding how microbiomes drive links among terrestrial (plant and soil) and aquatic habitats will inform management decisions influencing ecosystem services. In the present article, we synthesize knowledge of microbiomes from traditionally disparate fields and how they mediate connections across physically separated systems. We identify knowledge gaps currently limiting our abilities to actualize microbiome management approaches for addressing environmental problems and optimize ecosystem services.

中文翻译：

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联系和反馈：异构和多变环境中的水生，植物和土壤微生物群落

植物，土壤和水生微生物群相互作用，但是科学家经常独立研究它们。在这些传统上分开的子学科中整合知识将使人们对微生物的生态特性有更好的了解。植物，土壤和水生微生物群落之间的相互作用以及人为因素影响重要的生态系统过程，包括温室气体通量，作物生产，非本地物种控制以及从陆地到水生生境的养分通量。陆地微生物群影响养分的保持和颗粒运动，从而影响水生微生物群的组成和功能，而水生微生物群本身控制着水质以及有害藻华的可能性。了解微生物群落如何驱动陆地（植物和土壤）与水生生境之间的联系将有助于影响生态系统服务的管理决策。在本文中，我们综合了传统上不同领域的微生物群落知识，以及它们如何介导物理上分离的系统之间的连接。我们发现当前存在的知识空白限制了我们实现微生物组管理方法以解决环境问题和优化生态系统服务的能力。