当前位置: X-MOL 学术J. Psychiatr. Res. › 论文详情
Our official English website, www.x-mol.net, welcomes your feedback! (Note: you will need to create a separate account there.)
Epigenetics of neuroinflammation: Immune response, inflammatory response and cholinergic synaptic involvement evidenced by genome-wide DNA methylation analysis of delirious inpatients.
Journal of Psychiatric Research ( IF 3.7 ) Pub Date : 2020-06-06 , DOI: 10.1016/j.jpsychires.2020.06.005
Taku Saito 1 , Hiroyuki Toda 2 , Gabrielle N Duncan 3 , Sydney S Jellison 3 , Tong Yu 3 , Mason J Klisares 3 , Sophia Daniel 3 , Allison J Andreasen 3 , Lydia R Leyden 3 , Mandy M Hellman 3 , Eri Shinozaki 4 , Sangil Lee 5 , Aihide Yoshino 2 , Hyunkeun R Cho 6 , Gen Shinozaki 7
Affiliation  

Previously our study has shown that the DNA methylation (DNAm) levels at CpG sites in the pro-inflammatory cytokine gene, TNF-alpha, decrease along with aging, suggesting the potential role of DNAm in aging and heightened inflammatory process leading to increased risk for delirium. However, DNAm differences between delirium cases and non-delirium controls have not been investigated directly. Therefore, we examined genome-wide DNAm differences in blood between patients with delirium and controls to identify useful epigenetic biomarkers for delirium. Data from a total of 87 subjects (43 delirium cases) were analyzed by a genome-wide DNAm case-control association study. A genome-wide significant CpG site near the gene of LDLRAD4 was identified (p = 5.07E-8). In addition, over-representation analysis showed several significant pathways with a false discovery rate adjusted p-value < 0.05. The top pathway with a Gene Ontology term was immune response, and the second top pathway with a Kyoto Encyclopedia of Genes and Genomes term was cholinergic synapse. Significant DNAm differences related to immune/inflammatory response were shown both at gene and pathway levels between patients with delirium and non-delirium controls. This finding indicates that DNAm status in blood has the potential to be used as epigenetic biomarkers for delirium.



中文翻译:

神经炎症的表观遗传学:通过对谵妄住院患者的全基因组 DNA 甲基化分析证明的免疫反应、炎症反应和胆碱能突触参与。

此前,我们的研究表明,促炎细胞因子基因TNF-α中 CpG 位点的 DNA 甲基化 (DNAm) 水平随着衰老而降低,这表明 DNAm 在衰老和炎症过程中的潜在作用导致增加的风险谵妄。然而,尚未直接调查谵妄病例和非谵妄对照组之间的 DNAm 差异。因此,我们检查了谵妄患者和对照组之间血液中全基因组 DNAm 的差异,以确定有用的谵妄表观遗传生物标志物。通过全基因组 DNAm 病例对照关联研究分析了来自总共 87 名受试者(43 例谵妄病例)的数据。鉴定了LDLRAD4基因附近的全基因组显着 CpG 位点(p = 5.07E-8)。此外,过度代表性分析显示了几个重要的途径,错误发现率调整后的p值 < 0.05。基因本体论术语的顶级通路是免疫反应,京都基因和基因组百科全书术语的第二个顶级通路是胆碱能突触。谵妄和非谵妄对照患者在基因和通路水平上均显示出与免疫/炎症反应相关的显着 DNAm 差异。这一发现表明血液中的 DNAm 状态有可能用作谵妄的表观遗传生物标志物。

更新日期:2020-06-23
down
wechat
bug