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Corrected QT Interval-Polygenic Risk Score and Its Contribution to Type 1, Type 2, and Type 3 Long-QT Syndrome in Probands and Genotype-Positive Family Members.
Circulation: Genomic and Precision Medicine ( IF 6.0 ) Pub Date : 2020-05-29 , DOI: 10.1161/circgen.120.002922
Kari L Turkowski 1, 2 , Steven M Dotzler 1, 2 , David J Tester 2 , John R Giudicessi 3 , J Martijn Bos 2, 4 , Ashley D Speziale 5 , Jason M Vollenweider 5 , Michael J Ackerman 2, 4, 6
Affiliation  

Background:Long-QT syndrome (LQTS) is characterized by a prolonged heart rate–corrected QT interval (QTc). Genome-wide association studies identified common genetic variants that collectively explain ≈8% to 10% of QTc variation in the general population.Methods:Overall, 423 patients with LQT1, LQT2, or LQT3 were genotyped for 61 QTc-associated genetic variants used in a prototype QTc–polygenic risk score (QTc-PRS). A weighted QTc-PRS (range, 0–154.8 ms) was calculated for each patient, and the FHS (Framingham Heart Study) population-based reference cohort (n=853).Results:The average QTc-PRS in LQTS was 88.0±7.2 and explained only ≈2.0% of the QTc variability. The QTc-PRS in LQTS probands (n=137; 89.3±6.8) was significantly greater than both FHS controls (87.2±7.4, difference-in-means±SE: 2.1±0.7, P<0.002) and LQTS genotype-positive family members (87.5±7.4, difference-in-mean, 1.8±.7, P<0.009). There was no difference in QTc-PRS between symptomatic (n=156, 88.6±7.3) and asymptomatic patients (n=267; 87.7±7.2, difference-in-mean, 0.9±0.7, P=0.15). LQTS patients with a QTc≥480 ms (n=120) had a significantly higher QTc-PRS (89.3±6.7) than patients with a QTc<480 ms (n=303, 87.6±7.4, difference-in-mean, 1.7±0.8, P<0.05). There was no difference in QTc-PRS or QTc between genotypes.Conclusions:The QTc-PRS explained <2% of the QTc variability in our LQT1, LQT2, and LQT3 cohort, contributing 5× less to their QTc value than in the general population. This prototype QTc-PRS does not distinguish/predict the clinical outcomes of individuals with LQTS.

中文翻译:

校正 QT 间期多基因风险评分及其对先证者和基因型阳性家庭成员 1 型、2 型和 3 型长 QT 综合征的影响。

背景:长 QT 综合征 (LQTS) 的特征是延长的心率校正 QT 间期 (QTc)。全基因组关联研究确定了共同解释一般人群中约 8% 至 10% QTc 变异的常见遗传变异。原型 QTc-多基因风险评分 (QTc-PRS)。计算每位患者的加权 QTc-PRS(范围,0-154.8 ms),并计算 FHS(弗雷明汉心脏研究)基于人群的参考队列(n=853)。结果:LQTS 中的平均 QTc-PRS 为 88.0± 7.2 并仅解释了 QTc 变异性的 ≈2.0%。LQTS 先证者(n=137;89.3±6.8)的 QTc-PRS 显着高于两个 FHS 对照(87.2±7.4,均值差异±SE:2.1±0.7,P<0.002) 和 LQTS 基因型阳性家族成员 (87.5±7.4,均值差异,1.8±.7,P <0.009)。有症状(n=156,88.6±7.3)和无症状患者(n=267;87.7±7.2,均值差异,0.9±0.7,P=0.15)的 QTc-PRS 没有差异。QTc≥480 ms 的 LQTS 患者 (n=120) 的 QTc-PRS (89.3±6.7) 显着高于 QTc<480 ms 的患者 (n=303, 87.6±7.4, 均值差异, 1.7± 0.8,P < 0.05)。基因型之间的 QTc-PRS 或 QTc 没有差异。 结论:在我们的 LQT1、LQT2 和 LQT3 队列中,QTc-PRS 解释了 <2% 的 QTc 变异,对其 QTc 值的贡献比一般人群少 5 倍. 该原型 QTc-PRS 不区分/预测 LQTS 个体的临床结果。
更新日期:2020-05-29
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