Abstract

The first complete chloroplast genome (cpDNA) sequence of Kadsura heteroclita was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 153,289 bp in length, contains a large single copy region (LSC) of 85,774 bp and a small single copy region (SSC) of 18,201 bp, which were separated by a pair of inverted repeats (IR) regions of 24,657 bp. The genome contains 129 genes, including 84 protein-coding genes, eight ribosomal RNA genes, and 37 transfer RNA genes. Further phylogenomic analysis showed that K. heteroclita and K. interior clustered in a clade in Schisandraceae family.

摘要

从这项研究中的Illumina HiSeq配对末端测序数据确定了Kadsura heteroclita的第一个完整的叶绿体基因组（cpDNA）序列。cpDNA长度为153,289 bp，包含一个85,774 bp的大单拷贝区域（LSC）和一个18,201 bp的小单拷贝区域（SSC），它们被一对24,657 bp的反向重复序列（IR）隔开。该基因组包含129个基因，其中包括84个蛋白质编码基因，8个核糖体RNA基因和37个转移RNA基因。进一步的系统生物学分析表明，异端假丝酵母和内脏假丝酵母内部聚集在五味子科的一个进化枝中。