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Full genome sequence of a new mitovirus from the phytopathogenic fungus Rhizoctonia solani.
Archives of Virology ( IF 2.5 ) Pub Date : 2020-05-18 , DOI: 10.1007/s00705-020-04664-w
Siwei Li 1 , Yuting Li 1 , Chenghui Hu 1 , Chenggui Han 1 , Tao Zhou 1 , Can Zhao 1, 2 , Xuehong Wu 1
Affiliation  

A double-stranded RNA (dsRNA) segment was identified in Rhizoctonia solani anastomosis group (AG)-2-2IIIB, the primary causal agent of Rhizoctonia crown and root rot of sugar beet. The dsRNA segment represented the genome replication intermediate of a new mitovirus that was tentatively designated as "Rhizoctonia solani mitovirus 39" (RsMV-39). The complete sequence of the dsRNA was 2805 bp in length with 61.9% A+U content. Using either the fungal mitochondrial or universal genetic code, a protein of 840 amino acids containing an RNA-dependent RNA polymerase (RdRp) domain was predicted with a molecular mass of 94.46 kDa. BLASTp analysis revealed that the RdRp domain of RsMV-39 had 43.55% to 72.96% sequence identity to viruses in the genus Mitovirus, and was the most similar (72.96% identical) to that of Ceratobasidium mitovirus A (CbMV-A). Phylogenetic analysis based on RdRp domains clearly showed that RsMV-39 is a member of a distinct species in the genus Mitovirus of the family Mitoviridae. This is the first full genome sequence of a mycovirus associated with R. solani AG-2-2IIIB.



中文翻译:

来自植物病原真菌立枯丝核菌的新型线粒体病毒的全基因组序列。

在立枯丝核菌吻合群 (AG)-2-2IIIB中鉴定出双链 RNA (dsRNA) 片段,该群是甜菜丝核菌冠腐病和根腐病的主要致病因子。dsRNA片段代表了一种新的线粒体病毒的基因组复制中间体,该病毒暂时被命名为“立枯丝核菌线粒体病毒39”(RsMV-39)。dsRNA完整序列长度为2805 bp,A+U含量为61.9%。使用真菌线粒体或通用遗传密码,预测含有 RNA 依赖性 RNA 聚合酶 (RdRp) 结构域的 840 个氨基酸的蛋白质,其分子量为 94.46 kDa。BLASTp分析显示,RsMV-39的RdRp结构域与线粒体病毒属病毒具有43.55%至72.96%的序列同一性,并且与Ceratobasidium线粒体病毒A(CbMV-A)的RdRp结构域最为相似(72.96%同一性)。基于 RdRp 结构域的系统发育分析清楚地表明,RsMV-39 是线粒体病毒科线粒体病毒属的一个独特物种的成员这是与立枯丝核菌AG-2-2IIIB相关的真菌病毒的第一个完整基因组序列。

更新日期:2020-05-18
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