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Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov.
Journal of Microbiology ( IF 3 ) Pub Date : 2020-02-27 , DOI: 10.1007/s12275-020-9376-0
Yun Jae Kim , Jhung-Ahn Yang , Jae Kyu Lim , Mi-Jeong Park , Sung-Hyun Yang , Hyun Sook Lee , Sung Gyun Kang , Jung-Hyun Lee , Kae Kyoung Kwon

An anaerobic, rod-shaped, mesophilic, chemolithoautotrophic, sulfate-reducing bacterial strain IOR2T was isolated from a newly found deep-sea hydrothermal vent (OVF, Onnuri Vent Field) area in the central Indian Ocean ridge (11°24′88″ S 66°25′42″ E, 2021 m water depth). The 16S rRNA gene sequence analysis revealed that the strain IOR2T was most closely related to Desulfovibrio senegalensis BLaC1T (96.7%). However, it showed low similarity with the members of the family Desulfovibrionaceae, such as Desulfovibrio tunisiensis RB22T (94.0%), D. brasiliensis LVform1T (93.9%), D. halophilus DSM 5663T (93.7%), and Pseudodesulfovibrio aespoeensis Aspo-2T (93.2%). The strain IOR2T could grow at 23–42°C (optimum 37°C), pH 5.0–8.0 (optimum pH 7.0) and with 0.5–6.5% (optimum 3.0%) NaCl. The strain could use lactate, pyruvate, H2, and glycerol as electron donors and sulfate, thiosulfate, and sulfite as electron acceptors. The major fatty acids of the strain IOR2T were iso-C15:0, iso-C17:0, ante-iso-C15:0, and summed feature 9 (C16:0 methyl/iso-C17:1ω9c). Both the strains IOR2T and BLaC1T could grow with CO2 and H2 as the sole sources of carbon and energy, respectively. Genomic evidence for the Wood-Ljungdahl pathway in both the strains reflects chemolithoautotrophic growth. The DNA G + C content of the strain IOR2T and BLaC1T was 58.1–60.5 mol%. Based on the results of the phylogenetic and physiologic studies, Paradesulfovibrio onnuriensis gen. nov., sp. nov. with the type strain IOR2T (= KCTC 15845T = MCCC 1K04559T) was proposed to be a member of the family Desulfovibrionaceae. We have also proposed the reclassification of D. senegalensis as Paradesulfovibrio senegalensis comb. nov.

中文翻译:

洋葱对硫磺弧菌 十一月,sp。nov。,一种从印度洋的Onnuri气田分离出的减少化学自养型硫酸盐的细菌,并将塞内加尔Desulfovibrio senegalensis重新分类为Paradesulfovibrio senegalensis梳。十一月

厌氧,棒状,嗜温,化能自养,硫酸盐还原细菌菌株IOR2 Ť从一个新发现的深海热液喷口(OVF,Onnuri喷口区)区域在中央印度洋脊分离(11°24'88“ S 66°25′42″ E,2021 m水深)。16S rRNA基因序列分析表明,菌株IOR2 T塞内加尔脱硫弧菌BLaC1 T密切相关(96.7%)。然而,它显示出低的相似度与家庭成员Desulfovibrionaceae,如脱硫弧菌tunisiensis RB22 Ť(94.0%),D.巴西LVform1 Ť(93.9%),D.嗜盐DSM 5663 T(93.7%)和Pseudodesulfovibrio aespoeensis Aspo-2 T(93.2%)。IOR2 T菌株可以在23–42°C(最佳37°C),pH 5.0–8.0(最佳pH 7.0)和0.5–6.5%(最佳3.0%)的NaCl中生长。该菌株可以使用乳酸,丙酮酸,H 2和甘油作为电子供体,并使用硫酸盐,硫代硫酸盐和亚硫酸盐作为电子受体。菌株IOR2 T的主要脂肪酸为iso-C 15:0,iso-C 17:0,ante-iso-C 15:0和总和9(C 16:0甲基/ iso-C 17:1 ω 9 ç)。两种菌株IOR2 TBLaC1 T和BLaC1 T可能分别以CO 2和H 2作为唯一的碳和能量来源生长。这两个菌株中Wood-Ljungdahl途径的基因组证据都反映了化石自养菌的生长。IOR2 T和BLaC1 T菌株的DNA G + C含量为58.1–60.5 mol%。根据系统发育和生理学研究的结果,我们发现了Paradesulfovibrio onnuriensis gen。十一月,sp。十一月 IOR2 T型菌株(= KCTC 15845 T = MCCC 1K04559 T)被认为是脱硫弧菌科的成员。我们还提出了塞内加尔丁香的重新分类塞内加尔对虾。十一月
更新日期:2020-02-27
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