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Molecular characterization of a novel cytorhabdovirus with a unique genomic organization infecting yerba mate (Ilex paraguariensis) in Argentina.
Archives of Virology ( IF 2.5 ) Pub Date : 2020-04-03 , DOI: 10.1007/s00705-020-04609-3
Nicolás Bejerman 1, 2 , Raúl Maximiliano Acevedo 3 , Soledad de Breuil 1, 2 , Oscar A Ruiz 4 , Pedro Sansberro 3 , Ralf G Dietzgen 5 , Claudia Nome 1, 2 , Humberto Debat 1, 2
Affiliation  

The genome of a novel rhabdovirus was detected in yerba mate (Ilex paraguariensis St. Hil.). The newly identified virus, tentatively named "yerba mate virus A" (YmVA), has a genome of 14,961 nucleotides. Notably, eight open reading frames were identified in the antigenomic orientation of the negative-sense, single-stranded viral RNA, including two novel accessory genes, in the order 3'-N-P-3-4-M-G-L-8-5'. Sequence comparisons of the encoded proteins as well as phylogenetic analysis suggest that YmVA is a new member of the genus Cytorhabdovirus, family Rhabdoviridae. YmVA's unique genomic organization and phylogenetic relationships indicate that this virus likely represents a distinct evolutionary lineage among the cytorhabdoviruses.

中文翻译:

具有独特基因组结构的新型细胞病毒的分子表征,在阿根廷感染yerba mate(Ilex paraguariensis)。

一种新型弹状病毒的基因组是在yerba mate(Ilex paraguariensis St. Hil。)中检测到的。新近鉴定出的病毒,暂时命名为“ yerba mate virus A”(YmVA),具有14961个核苷酸的基因组。值得注意的是,以3'-NP-3-4-MGL-8-5'的顺序,在负义单链病毒RNA的反基因组方向上鉴定出八个开放阅读框,包括两个新的辅助基因。编码蛋白质的序列比较以及系统发育分析表明,YmVA是Cytorhabdovirus属Rhabdoviridae家族的新成员。YmVA独特的基因组组织和系统发育关系表明,该病毒可能代表了细胞病毒中的独特进化谱系。
更新日期:2020-04-03
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