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Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data.
Bioinformatics ( IF 4.4 ) Pub Date : 2020-03-11 , DOI: 10.1093/bioinformatics/btaa171
Kun Sun 1
Affiliation  

Next-generation sequencing (NGS) data frequently suffer from poor-quality cycles and adapter contaminations therefore need to be preprocessed before downstream analyses. With the ever-growing throughput and read length of modern sequencers, the preprocessing step turns to be a bottleneck in data analysis due to unmet performance of current tools. Extra-fast and accurate adapter- and quality-trimming tools for sequencing data preprocessing are therefore still of urgent demand.

中文翻译:

Ktrim:超快速,准确的适配器和质量微调器,用于对数据进行排序。

下一代测序(NGS)数据经常遭受质量较差的循环困扰,因此需要在下游分析之前对适配器污染进行预处理。随着现代定序器吞吐量和读取长度的不断增长,由于当前工具的性能无法满足需求,因此预处理步骤已成为数据分析的瓶颈。因此,仍然迫切需要用于序列数据预处理的超快速,准确的适配器和质量修整工具。
更新日期:2020-03-11
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