Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.,Archives of Virology

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Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.
Archives of Virology ( IF 2.5 ) Pub Date : 2020-05-01 , DOI: 10.1007/s00705-020-04577-8
Evelien M Adriaenssens ₁ , Matthew B Sullivan ₂ , Petar Knezevic ₃ , Leonardo J van Zyl ₄ , B L Sarkar ₅ , Bas E Dutilh _{6,

7} , Poliane Alfenas-Zerbini ₈ , Małgorzata Łobocka ₉ , Yigang Tong ₁₀ , James Rodney Brister ₁₁ , Andrea I Moreno Switt ₁₂ , Jochen Klumpp ₁₃ , Ramy Karam Aziz ₁₄ , Jakub Barylski ₁₅ , Jumpei Uchiyama ₁₆ , Rob A Edwards _{17,

18} , Andrew M Kropinski _{19,

20} , Nicola K Petty ₂₁ , Martha R J Clokie ₂₂ , Alla I Kushkina ₂₃ , Vera V Morozova ₂₄ , Siobain Duffy ₂₅ , Annika Gillis ₂₆ , Janis Rumnieks ₂₇ , İpek Kurtböke ₂₈ , Nina Chanishvili ₂₉ , Lawrence Goodridge ₁₉ , Johannes Wittmann ₃₀ , Rob Lavigne ₃₁ , Ho Bin Jang ₃₂ , David Prangishvili _{33,

34} , Francois Enault ₃₅ , Dann Turner ₃₆ , Minna M Poranen ₃₇ , Hanna M Oksanen ₃₇ , Mart Krupovic ₃₃

Affiliation

Quadram Institute Bioscience, Norwich Research Park, Norwich, Norfolk, NR4 7UQ, UK.
Department of Microbiology and Civil, Environmental and Geodetic Engineering, The Ohio State University, Columbus, OH, 43210, USA.
Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia.
Department of Biotechnology, Institute for Microbial Biotechnology and Metagenomics (IMBM), University of the Western Cape, Bellville, Cape Town, 7535, South Africa.
ICMR-National Institute of Cholera and Enteric Diseases, P-33, C.I.T. Road, Scheme XM, Beleghata, Kolkata, 700010, India.
Theoretical Biology and Bioinformatics, Utrecht University, Utrecht, The Netherlands.
Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre, Nijmegen, The Netherlands.
Laboratory of Industrial Microbiology, Instituto de Biotecnologia Aplicada à Agropecuária, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
Department of Microbial Biochemistry, Institute of Biochemistry and Biophysics of the Polish Academy of Sciences, 02-106, Warsaw, Poland.
College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, China.
National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, 20894, USA.
Faculty of Life Sciences, Universidad Andres Bello, Republica 440, 8370146, Santiago, Chile.
Institute of Food, Nutrition and Health, ETH Zurich, 8092, Zurich, Switzerland.
Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Qasr El-Ainy St, Cairo, 11562, Egypt.
Department of Molecular Virology, Institute of Experimental Biology, Adam Mickiewicz University, Poznan, Poland.
School of Veterinary Medicine, Azabu University, Fuchinobe 1-17-71, Chuo-ku, Sagamihara, Kanagawa, 252-0206, Japan.
Department of Computer Science, San Diego State University, San Diego, CA, 92182, USA.
Department of Biology, San Diego State University, San Diego, CA, 92182, USA.
Food Science Department, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada.
Department of Pathobiology, Ontario Veterinary College, University of Guelph, 50 Stone Road E, Guelph, ON, N1G 2W1, Canada.
The ithree Institute, University of Technology Sydney, Sydney, NSW, 2007, Australia.
Department of Infection, Immunity and Inflammation, University of Leicester, Leicester, LE1 9HN, UK.
Department of Bacteriophage Molecular Genetics, D.K. Zabolotny Institute of Microbiology and Virology, the NAS of Ukraine, 154 Acad.Zabolotny str, Kyiv, 03143, Ukraine.
Institute of Chemical Biology and Fundamental Medicine (RAS), Novosibirsk, Russia.
Department of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ, 08901, USA.
Section of Molecular Microbiology and Medical Research Council Centre for Molecular Bacteriology and Infection, Imperial College London, London, SW72AZ, UK.
Latvian Biomedical Research and Study Center, Ratsupites 1, Riga, 1067, Latvia.
Genecology Research Centre, School of Science and Engineering, University of the Sunshine Coast, Maroochydore DC, QLD, 4558, Australia.
G. Eliava Institute of Bacteriophages, Microbiology and Virology, 3 Gotua Street, 0160, Tbilisi, Georgia.
Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH, 38124, Brunswick, Germany.
Laboratory of Gene Technology, Department of Biosystems, KU Leuven, Kasteelpark Arenberg 21 box 2462, 3001, Leuven, Belgium.
Department of Microbiology, The Ohio State University, Columbus, OH, 43210, USA.
Archaeal Virology Unit, Department of Microbiology, Institut Pasteur, 75015, Paris, France.
Ivane Javakhishvili Tbilisi State University, 0179, Tbilisi, Georgia.
Université Clermont Auvergne, CNRS, LMGE, 63000, Clermont-Ferrand, France.
Faculty of Health and Applied Sciences, University of the West of England, Bristol, Frenchay Campus, Bristol, BS16 1QY, UK.
Molecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland.

This article is a summary of the activities of the ICTV's Bacterial and Archaeal Viruses Subcommittee for the years 2018 and 2019. Highlights include the creation of a new order, 10 families, 22 subfamilies, 424 genera and 964 species. Some of our concerns about the ICTV's ability to adjust to and incorporate new DNA- and protein-based taxonomic tools are discussed.

中文翻译：

ICTV细菌和古细菌病毒小组委员会的原核病毒分类：2018-2019年更新。

本文是ICTV细菌和古细菌病毒小组委员会2018年和2019年活动的摘要。重点包括创建一个新订单，10个科，22个亚科，424属和964种。讨论了一些有关ICTV适应和整合基于DNA和蛋白质的新分类工具的能力的担忧。

更新日期：2020-03-12

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