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Genome sequence of Epibacterium ulvae strain DSM 24752T, an indigoidine-producing, macroalga-associated member of the marine Roseobacter group
Environmental Microbiome ( IF 6.2 ) Pub Date : 2019-08-06 , DOI: 10.1186/s40793-019-0343-5
Sven Breider , Shama Sehar , Martine Berger , Torsten Thomas , Thorsten Brinkhoff , Suhelen Egan

Strain U95T (= DSM 24752T = LMG 26464T) is the type strain of Epibacterium ulvae, which is the type species of the genus Epibacterium. This genus belongs to the marine Roseobacter group. E. ulvae Strain U95T was isolated from the macroalga Ulva australis, is Gram-negative, rod-shaped and motile. Here we describe the permanent draft genome sequence and annotation of E. ulvae U95T with a focus on secondary metabolite production and interaction with its host. The genome contains 4,092,893 bp, 3977 protein-coding genes and 60 RNA genes. The genome encodes a gene cluster for synthesis of the blue-pigmented secondary metabolite indigoidine and contains several genes for adhesion mechanisms, putative bacteriocin, siderophores, a type VI secretion system, and enzymes that confer oxidative stress resistance. Combined, these features may aid in the successful colonization and persistence of E. ulvae on host surfaces and in competition with the surrounding microbial consortium.

中文翻译:

的基因组序列Epibacterium ulvae菌株DSM 24752 Ť,海洋的indigoidine生产,大藻相关构件Roseobacter

菌株U95T(= DSM 24752T = LMG 26464T)是上皮细菌的一种,是上皮细菌的一种。该属属于海洋玫瑰杆菌属。E.ulvae菌株U95T分离自大藻Ulva australis,革兰氏阴性,杆状,能动。在这里,我们描述了E.ulvae U95T的永久草案基因组序列和注释,重点是次级代谢产物的产生及其与其宿主的相互作用。该基因组包含4,092,893 bp,3977个蛋白质编码基因和60个RNA基因。该基因组编码一个用于合成蓝色色素次级代谢产物靛蓝的基因簇,并包含几个粘附机制,推定的细菌素,铁载体,VI型分泌系统和赋予抗氧化性的酶的基因。结合起来
更新日期:2019-08-06
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