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Rapid and non-invasive screening of high-risk human papillomavirus using Fourier transform infrared spectroscopy and multivariate analysis
Optik Pub Date : 2020-01-24 , DOI: 10.1016/j.ijleo.2020.164292
Huixia Mo , Liu Yang , Guohua Wu , Xiangxiang Zheng , Jing Wang , Longfei Yin , Xiaoyi Lv

Persistent high-risk human papillomavirus (HR-HPV) infection is leading cause for the occurrence of cervical cancer, and timely detection and early treatment of HR-HPV infection can effectively reduce incidence of cervical cancer. In this study, a rapid and non-invasive method for detecting HR-HPV was proposed by using Fourier transform infrared (FT-IR) spectra of cervical exfoliated cells combined with multivariate analysis. A total of 100 spectra were recorded from 50 HR-HPV positive patients and 50 normal subjects. The obvious difference in infrared spectrum between the two groups was mainly shown at 1042 cm−1 (mucin), 1246 cm−1 (amide III), 1396 cm-1 (proteins), 1543 cm−1 (amide II), 1651 cm−1 (amide I), 2361 cm−1 (CO2), 2928 cm−1 (lipids), and 3294 cm−1 (amide A). Then, a principal component analysis-linear discriminant analysis (PCA-LDA) diagnostic model was developed and applied on the FT-IR spectra of normal samples as well as HR-HPV positive patients, and satisfactory classification results were obtained. The diagnostic accuracy, specificity, and sensitivity were 98 %, 98 %, and 98 %, respectively. Furthermore, the area under the receiver operating characteristic (ROC) curve (AUC) was 0.997, which could further demonstrate the feasibility of the PCA-LDA model. Therefore, our exploratory work shows that the combination of FT-IR spectroscopy and PCA-LDA model has great potential for HR-HPV screening.



中文翻译:

使用傅里叶变换红外光谱和多变量分析快速,无创地筛查高危人乳头瘤病毒

持续存在的高危人乳头瘤病毒(HR-HPV)感染是宫颈癌发生的主要原因,及时发现和早期治疗HR-HPV感染可以有效降低宫颈癌的发生率。在这项研究中,通过使用宫颈脱落细胞的傅立叶变换红外光谱(FT-IR)结合多变量分析,提出了一种快速,无创的​​HR-HPV检测方法。从50例HR-HPV阳性患者和50例正常受试者中记录了总共100张光谱。两组之间红外光谱的明显差异主要表现在1042 cm -1(粘蛋白),1246 cm -1(酰胺III),1396 cm -1(蛋白质),1543 cm -1(酰胺II),1651 cm -1(酰胺I),2361 cm -1(CO 2),2928 cm -1(脂质)和3294 cm -1(酰胺A)。然后,建立了主成分分析-线性判别分析(PCA-LDA)诊断模型,并将其应用于正常样品以及HR-HPV阳性患者的FT-IR光谱,并获得了令人满意的分类结果。诊断准确性,特异性和敏感性分别为98%,98%和98%。此外,接收器工作特性(ROC)曲线(AUC)下的面积为0.997,这可以进一步证明PCA-LDA模型的可行性。因此,我们的探索性工作表明,将FT-IR光谱学和PCA-LDA模型相结合具有进行HR-HPV筛查的巨大潜力。

更新日期:2020-01-24
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