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Genetic variability of Polish serogroup B meningococci (2010-2016) including the 4CMenB vaccine component genes.
Vaccine ( IF 4.5 ) Pub Date : 2020-01-21 , DOI: 10.1016/j.vaccine.2020.01.021
Izabela Waśko 1 , Agnieszka Gołębiewska 1 , Marlena Kiedrowska 1 , Patrycja Ronkiewicz 1 , Izabela Wróbel-Pawelczyk 1 , Alicja Kuch 1 , Eva Hong 2 , Anna Skoczyńska 1
Affiliation  

Neisseria meningitidis serogroup B (MenB) has recently become the major cause of invasive meningococcal disease in Poland. Therefore, the purpose of this study was to characterize MenB isolates, responsible for invasive meningococcal disease in 2010-2016, by MLST and sequencing of genes encoding proteins used as 4CMenB vaccine antigens. Two methods of coverage estimation were performed: extrapolation of MATS results of Polish meningococci 2010-2011 (exMATS) and gMATS, which combines genotyping and MATS results. Among 662 isolates 20 clonal complexes (CC) were detected, of which the most frequent were CC32, CC41/44 and CC18, accounting for 31.9%, 16.5% and 12.7%, respectively. A total of 111 combinations of PorA variable regions (VR1/VR2) were found, with P1.7,16 (15.0%) and P1.22,14 (13.6%) being prevalent. Vaccine variant VR2:4 was detected in 7.3% of isolates, mainly representing CC41/44 and non-assigned CC. Eighty five fHbp alleles encoding 74 peptide subvariants were revealed. Subvariant 1.1, a component of 4CMenB, was prevalent (24.2%) and found generally in CC32. Typing of the nhba gene revealed 102 alleles encoding 87 peptides. The most frequent was peptide 3 (22.4%), whereas vaccine peptide 2 was detected in 9.8%, mostly among CC41/44. The nadA gene was detected in 34.0% of isolates and the most prevalent was peptide 1 (variant NadA-1; 71.6%), found almost exclusively in CC32 meningococci. Vaccine peptide 8 (variant NadA-2/3) was identified once. Consequently, 292 completed BAST profiles were revealed. Regarding vaccine coverage, 39.7% of isolates had at least one 4CMenB vaccine variant, but according to exMATS and gMATS the coverage was 83.3% and 86.6%, respectively. In conclusion, Polish MenB (2010-2016) was highly diverse according to MLST and gene alleles encoding 4CMenB vaccine antigens. Some correlations between clonal complexes and variants of examined proteins/BAST profiles were revealed and a high coverage of 4CMenB vaccine was estimated.

中文翻译:

波兰B群脑膜炎球菌(2010-2016)的遗传变异性,包括4CMenB疫苗成分基因。

脑膜炎奈瑟菌B血清群(MenB)最近已成为波兰侵袭性脑膜炎球菌疾病的主要原因。因此,本研究的目的是通过MLST和编码用作4CMenB疫苗抗原的蛋白质的基因测序来表征2010年至2016年造成侵袭性脑膜炎球菌疾病的MenB分离株。进行了两种覆盖率估计方法:波兰2010-2011年脑膜炎双球菌(exMATS)和gMATS的MATS结果外推,结合了基因分型和MATS结果。在662个分离物中,检测到20个克隆复合物(CC),其中最常见的是CC32,CC41 / 44和CC18,分别占31.9%,16.5%和12.7%。总共发现了111个PorA可变区组合(VR1 / VR2),其中P1.7,16(15.0%)和P1.22,14(13.6%)很普遍。在7中检测到疫苗变体VR2:4。3%的分离株,主要代表CC41 / 44和未分配的CC。揭示了编码74个肽亚变体的85个fHbp等位基因。亚变种1.1是4CMenB的一个组成部分,非常流行(24.2%),通常在CC32中发现。nhba基因的分型显示102个等位基因,编码87个肽。最常见的是肽3(22.4%),而疫苗肽2的检出率为9.8%,主要在CC41 / 44中。在34.0%的分离物中检测到了nadA基因,最普遍的是肽1(变异的NadA-1; 71.6%),几乎仅在CC32脑膜炎球菌中发现。疫苗肽8(变异的NadA-2 / 3)被鉴定了一次。因此,揭示了292个完整的BAST配置文件。关于疫苗覆盖率,有39.7%的分离株具有至少一种4CMenB疫苗变体,但根据exMATS和gMATS的覆盖率分别为83.3%和86.6%。结论,根据MLST和编码4CMenB疫苗抗原的基因等位基因,波兰MenB(2010-2016)的差异很大。揭示了克隆复合物和所检查蛋白/ BAST图谱的变体之间的一些相关性,并估计了4CMenB疫苗的高覆盖率。
更新日期:2020-01-22
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