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Molecular Cloning, Expression and Biochemical Characterization of a Family 5 Glycoside Hydrolase First Endo-Mannanase (RfGH5_7) from Ruminococcus flavefaciens FD-1 v3.
Molecular Biotechnology ( IF 2.4 ) Pub Date : 2019-11-01 , DOI: 10.1007/s12033-019-00205-2
Dishant Goyal 1 , Krishan Kumar 1 , Maria S J Centeno 2 , Abhijeet Thakur 1 , Virgínia M R Pires 3 , Pedro Bule 2 , Carlos M G A Fontes 2, 3 , Arun Goyal 1
Affiliation  

The cellulosomal enzyme, RfGH51/2, of Ruminococcus flavefaciens contains an N-terminal module, a family 5 glycoside hydrolase GH5_4 with a putative endoglucanase activity, while C-terminal domain is a putative endo-mannanase (GH5_7). The two putative catalytic modules are separated by family 80 carbohydrate binding module (CBM80) having wide ligand specificity. The putative endo-mannanase module, GH5_7 (RfGH5_7), was cloned, expressed in Escherichia coli BL-21(DE3) cells and purified. SDS-PAGE analysis of purified RfGH5_7 showed molecular size ~ 35 kDa. Substrate specificity analysis of RfGH5_7 showed maximum activity against locust bean galactomannan (298.5 U/mg) followed by konjac glucomannan (256.2 U/mg) and carob galactomannan (177.2 U/mg). RfGH5_7 showed maximum activity at optimum pH 6.0 and temperature 60 °C. RfGH5_7 displayed stability in between pH 6.0 and 9.0 and thermostability till 50 °C. 10 mM Ca2+ ions increased the enzyme activity by 33%. The melting temperature of RfGH5_7 was 84 °C that was not affected by Ca2+ ions or chelating agents. RfGH5_7 showed, Vmax, 389 U/mg and Km, 0.92 mg/mL for locust bean galactomannan. TLC analysis revealed that RfGH5_7 hydrolysed locust bean galactomannan predominantly to mannose, mannobiose, mannotriose and higher degree of polymerization of manno-oligosaccharides indicating an endo-acting catalytic mechanism. This study revealed a highly active and thermostable endo-mannanase with considerable biotechnological potential.

中文翻译:

黄褐球菌FD-1 v3家族5糖苷水解酶第一内切甘露聚糖酶(RfGH5_7)的分子克隆,表达及生化特征。

黄褐球菌的纤维素酶RfGH51 / 2包含一个N端模块,即具有推定的内切葡聚糖酶活性的5族糖苷水解酶GH5_4,而C端结构域则是一个推定的内甘露聚糖酶(GH5_7)。两个推定的催化模块被具有广泛配体特异性的80族碳水化合物结合模块(CBM80)隔开。克隆假定的甘露聚糖内切酶模块GH5_7(RfGH5_7),在大肠杆菌BL-21(DE3)细胞中表达并纯化。纯化的RfGH5_7的SDS-PAGE分析显示,分子大小约为35 kDa。RfGH5_7的底物特异性分析显示,对刺槐豆半乳甘露聚糖(298.5 U / mg)具有最大活性,其次是魔芋葡甘露聚糖(256.2 U / mg)和角豆半乳甘露聚糖(177.2 U / mg)。RfGH5_7在最佳pH 6.0和60°C的温度下显示出最大活性。RfGH5_7在pH 6.0和9.0之间显示稳定性,并在50°C之前保持热稳定性。10 mM Ca2 +离子使酶活性提高了33%。RfGH5_7的熔融温度为84°C,不受Ca2 +离子或螯合剂的影响。RfGH5_7对刺槐豆半乳甘露聚糖的Vmax为389 U / mg,Km为0.92 mg / mL。TLC分析表明,RfGH5_7将刺槐豆的半乳甘露聚糖水解成甘露糖,甘露二糖,甘露三糖,并且甘露寡糖的聚合度更高,表明其具有内在作用催化机理。这项研究揭示了一种高活性和热稳定的甘露聚糖内切酶,具有相当大的生物技术潜力。RfGH5_7的熔融温度为84°C,不受Ca2 +离子或螯合剂的影响。RfGH5_7对刺槐豆半乳甘露聚糖的Vmax为389 U / mg,Km为0.92 mg / mL。TLC分析表明,RfGH5_7将刺槐豆的半乳甘露聚糖水解成甘露糖,甘露二糖,甘露三糖,并且甘露寡糖的聚合度更高,表明其具有内在作用的催化机理。这项研究揭示了一种高活性和热稳定的甘露聚糖内切酶,具有相当大的生物技术潜力。RfGH5_7的熔融温度为84°C,不受Ca2 +离子或螯合剂的影响。RfGH5_7对刺槐豆半乳甘露聚糖的Vmax为389 U / mg,Km为0.92 mg / mL。TLC分析表明,RfGH5_7将刺槐豆的半乳甘露聚糖水解成甘露糖,甘露二糖,甘露三糖,并且甘露寡糖的聚合度更高,表明其具有内在作用催化机理。这项研究揭示了一种高活性和热稳定的甘露聚糖内切酶,具有相当大的生物技术潜力。
更新日期:2019-11-01
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