Recent years showed a strong increase in biomedical sciences and an inherent increase in publication volume. Extraction of specific information from these sources requires highly sophisticated text mining and information extraction tools. However, the integration of freely available tools into customized workflows is often cumbersome and difficult. We describe SIA (Scalable Interoperable Annotation Server), our contribution to the BeCalm-Technical interoperability and performance of annotation servers (BeCalm-TIPS) task, a scalable, extensible, and robust annotation service. The system currently covers six named entity types (i.e., chemicals, diseases, genes, miRNA, mutations, and organisms) and is freely available under Apache 2.0 license at https://github.com/Erechtheus/sia .

中文翻译：

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SIA：用于生物医学命名实体的可伸缩互操作注释服务器。

近年来显示出生物医学科学的强劲增长，并且出版量固有地增加。从这些来源中提取特定信息需要高度复杂的文本挖掘和信息提取工具。但是，将免费提供的工具集成到自定义工作流程中通常很麻烦且困难。我们描述了SIA（可伸缩互操作注释服务器），我们对BeCalm-Technical互操作性和注释服务器性能（BeCalm-TIPS）的贡献，可扩展，可扩展且强大的注释服务。该系统目前涵盖六种命名实体类型（即化学物质，疾病，基因，miRNA，突变和生物），并且可以通过https://github.com/Erechtheus/sia上的Apache 2.0许可免费获得。