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Genetic diversity of HLA system in two populations from Durango, Mexico: Durango city and rural Durango.
Human Immunology ( IF 3.1 ) Pub Date : 2019-06-11 , DOI: 10.1016/j.humimm.2019.06.005
Liliana González-Medina 1 , Rodrigo Barquera 2 , Héctor Delgado-Aguirre 3 , Stephen Clayton 4 , Carmen Adalid-Sáinz 3 , Esteban Arrieta-Bolaños 5 , Hanna Pacheco-Ubaldo 1 , Diana Iraíz Hernández-Zaragoza 6 , Néstor Escareño-Montiel 7 , Javier Morán-Martínez 8 , Alicia Bravo-Acevedo 9 , Abraham Lona-Sánchez 1 , Marisela Del Rocío González-Martínez 10 , Yolanda Jaramillo-Rodríguez 11 , Antonio Salgado-Adame 11 , Federico Juárez-de la Cruz 7 , Joaquín Zúñiga 12 , Edmond J Yunis 13 , Carolina Bekker-Méndez 14 , Julio Granados 15
Affiliation  

We studied HLA class I (HLA-A, -B) and class II (HLA-DRB1, -DQB1) alleles by PCR-SSP based typing in 479 Mexicans from the state of Durango living in Durango city (N = 153) and rural communities (N = 326), to obtain information regarding allelic and haplotypic frequencies. We find that the ten most frequent haplotypes found in the state of Durango include eight Native American and two European haplotypes. Admixture estimates revealed that the main genetic components in Durango are European (54.34 ± 1.68%) and Native American (45.66 ± 2.24%), while African genetic component was virtually absent (0.00 ± 2.03%). However, African haplotypes could be estimated at a proportion of 9.13%.



中文翻译:

来自墨西哥杜兰戈的两个种群中的HLA系统的遗传多样性:杜兰戈市和杜兰戈农村。

我们通过基于PCR-SSP的分型方法研究了HLA I类(HLA-A-B)和II类(HLA-DRB1-DQB1)等位基因,来自居住在杜兰戈市(N = 153)和农村的杜兰戈州的479名墨西哥人社区(N = 326),以获得有关等位基因和单倍型频率的信息。我们发现在杜兰戈州发现的十个最常见的单体型包括八个美洲原住民和两个欧洲单体型。混合物估计显示,杜兰戈的主要遗传成分是欧洲(54.34±1.68%)和美洲原住民(45.66±2.24%),而非洲几乎没有遗传成分(0.00±2.03%)。但是,非洲单倍型的估计比例为9.13%。

更新日期:2019-06-11
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