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TROSY NMR with a 52 kDa sugar transport protein and the binding of a small-molecule inhibitor.
Molecular Membrane Biology ( IF 2.857 ) Pub Date : 2014-05-30 , DOI: 10.3109/09687688.2014.911980
Arnout P Kalverda 1 , James Gowdy , Gary S Thompson , Steve W Homans , Peter J F Henderson , Simon G Patching
Affiliation  

Using the sugar transport protein, GalP, from Escherichia coli, which is a homologue of human GLUT transporters, we have overcome the challenges for achieving high-resolution [15N-1H]- and [13C-1H]-methyl-TROSY NMR spectra with a 52 kDa membrane protein that putatively has 12 transmembrane-spanning α-helices and used the spectra to detect inhibitor binding. The protein reconstituted in DDM detergent micelles retained structural and functional integrity for at least 48 h at a temperature of 25 °C as demonstrated by circular dichroism spectroscopy and fluorescence measurements of ligand binding, respectively. Selective labelling of tryptophan residues reproducibly gave 12 resolved signals for tryptophan 15N backbone positions and also resolved signals for 15N side-chain positions. For improved sensitivity isoleucine, leucine and valine (ILV) methyl-labelled protein was prepared, which produced unexpectedly well resolved [13C-1H]-methyl-TROSY spectra showing clear signals for the majority of methyl groups. The GalP/GLUT inhibitor forskolin was added to the ILV-labelled sample inducing a pronounced chemical shift change in one Ile residue and more subtle changes in other methyl groups. This work demonstrates that high-resolution TROSY NMR spectra can be achieved with large complex α-helical membrane proteins without the use of elevated temperatures. This is a prerequisite to applying further labelling strategies and NMR experiments for measurement of dynamics, structure elucidation and use of the spectra to screen ligand binding.



中文翻译:

具有52 kDa糖转运蛋白的TROSY NMR和小分子抑制剂的结合。

使用来自大肠杆菌(人类GLUT转运蛋白的同源物)的糖转运蛋白GalP,我们克服了获得高分辨率[ 15 N- 1 H]-和[ 13 C- 1 H]-甲基- TROSY NMR光谱具有52 kDa的膜蛋白,该蛋白推测具有12个跨膜的α螺旋,并使用该光谱检测抑制剂的结合。DDM去污剂胶束中重构的蛋白质在25°C的温度下至少保持48 h的结构和功能完整性,分别通过圆二色光谱和配体结合的荧光测量证明。色氨酸残基的选择性标记可再现地提供色氨酸的12个已解析信号15 N个主链位置以及15 N个侧链位置的已解析信号。为了提高敏感性,制备了异亮氨酸,亮氨酸和缬氨酸(ILV)甲基标记的蛋白质,产生了出乎意料的良好分离[ 13 C- 1H]-甲基-TROSY光谱显示大部分甲基的清晰信号。将GalP / GLUT抑制剂福司柯林添加到ILV标记的样品中,从而诱导一个Ile残基发生明显的化学位移变化,并导致其他甲基发生更细微的变化。这项工作表明,使用大型复杂的α-螺旋膜蛋白可以实现高分辨率的TROSY NMR光谱,而无需使用高温。这是应用进一步的标记策略和NMR实验测量动力学,结构阐明以及使用光谱筛选配体结合的前提。

更新日期:2014-05-30
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