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Peptide exchange on MHC-I by TAPBPR is driven by a negative allostery release cycle.
Nature Chemical Biology ( IF 12.9 ) Pub Date : 2018-07-09 , DOI: 10.1038/s41589-018-0096-2
Andrew C McShan 1 , Kannan Natarajan 2 , Vlad K Kumirov 1 , David Flores-Solis 1 , Jiansheng Jiang 2 , Mareike Badstübner 1 , Jugmohit S Toor 1 , Clive R Bagshaw 1 , Evgenii L Kovrigin 3 , David H Margulies 2 , Nikolaos G Sgourakis 1
Affiliation  

Chaperones TAPBPR and tapasin associate with class I major histocompatibility complexes (MHC-I) to promote optimization (editing) of peptide cargo. Here, we use solution NMR to investigate the mechanism of peptide exchange. We identify TAPBPR-induced conformational changes on conserved MHC-I molecular surfaces, consistent with our independently determined X-ray structure of the complex. Dynamics present in the empty MHC-I are stabilized by TAPBPR and become progressively dampened with increasing peptide occupancy. Incoming peptides are recognized according to the global stability of the final pMHC-I product and anneal in a native-like conformation to be edited by TAPBPR. Our results demonstrate an inverse relationship between MHC-I peptide occupancy and TAPBPR binding affinity, wherein the lifetime and structural features of transiently bound peptides control the regulation of a conformational switch located near the TAPBPR binding site, which triggers TAPBPR release. These results suggest a similar mechanism for the function of tapasin in the peptide-loading complex.



中文翻译:

TAPBPR在MHC-1上的肽交换是由负变构释放周期驱动的。

分子伴侣TAPBPR和Tapasin与I类主要组织相容性复合物(MHC-1)结合,以促进肽货物的优化(编辑)。在这里,我们使用溶液核磁共振来研究肽交换的机制。我们在保守的MHC-I分子表面上鉴定出TAPBPR诱导的构象变化,这与我们独立确定的复合物X射线结构一致。TAPBPR使空MHC-1中存在的动力学稳定,并随着肽占用的增加而逐渐减弱。根据最终的pMHC-1产品的整体稳定性识别进入的肽,并以天然样构象进行退火,由TAPBPR编辑。我们的结果表明,MHC-1肽的占有率与TAPBPR结合亲和力之间存在反比关系,其中瞬时结合的肽的寿命和结构特征控制位于TAPBPR结合位点附近的构象开关的调节,这触发了TAPBPR的释放。这些结果表明,在肽加载复合物中,塔帕森蛋白具有类似的功能。

更新日期:2018-07-10
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