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Easy quantification of template-directed CRISPR/Cas9 editing
Nucleic Acids Research ( IF 16.6 ) Pub Date : 2018-03-10 , DOI: 10.1093/nar/gky164
Eva K Brinkman 1 , Arne N Kousholt 2 , Tim Harmsen 3 , Christ Leemans 1 , Tao Chen 1 , Jos Jonkers 2, 4 , Bas van Steensel 1, 4
Affiliation  

Template-directed CRISPR/Cas9 editing is a powerful tool for introducing subtle mutations in genomes. However, the success rate of incorporation of the desired mutations at the target site is difficult to predict and therefore must be empirically determined. Here, we adapted the widely used TIDE method for quantification of templated editing events, including point mutations. The resulting TIDER method is a rapid, cheap and accessible tool for testing and optimization of template-directed genome editing strategies. A free web tool for TIDER data analysis is available at http://tide.nki.nl.

中文翻译:


轻松量化模板导向的 CRISPR/Cas9 编辑



模板导向的 CRISPR/Cas9 编辑是在基因组中引入细微突变的强大工具。然而,在靶位点掺入所需突变的成功率很难预测,因此必须凭经验确定。在这里,我们采用了广泛使用的 TIDE 方法来量化模板化编辑事件,包括点突变。由此产生的 TIDER 方法是一种快速、廉价且易于使用的工具,用于测试和优化模板导向的基因组编辑策略。用于 TIDER 数据分析的免费网络工具可从 http://tide.nki.nl 获取。
更新日期:2018-03-10
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