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Characterizing activation mechanisms and binding preferences of ruthenium metallo-prodrugs by a competitive binding assay
Journal of Inorganic Biochemistry ( IF 3.8 ) Pub Date : 2017-07-16 , DOI: 10.1016/j.jinorgbio.2017.07.010
Christian Artner , Hannah U. Holtkamp , Christian G. Hartinger , Samuel M. Meier-Menches

The activation mechanisms and reactivity of ruthenium metallo-prodrug lead structures were investigated in detail using capillary zone electrophoresis mass spectrometry (CZE–MS) in a time-dependent manner and by exposing to a protein/oligonucleotide mixture. The competitive assays were performed with sodium trans-[RuCl4(HInd)2] where Hind = indazole (NKP-1339), [(η6-p-cymene)RuCl2(pta)], where pta = 1,3,5-triaza-7-phosphaadamantane (RAPTA-C) and [(η6-biphenyl)RuCl(1,2-ethylenediamine)]PF6 (RM175). Molecular and quantitative information on binding preferences was obtained by coupling CZE to electrospray ionization MS (ESI-MS) and inductively coupled plasma MS (ICP-MS), respectively. A score system is presented that ranks the binding preferences of Ru complexes with nucleotides and demonstrated the following trend of decreasing selectivity after 24 h: RM175 (0.89) > RAPTA-C (0.78) > NKP-1339 (0.40). As expected, the organometallic drug candidates RM175 and RAPTA-C underwent a halido/aqua ligand exchange reaction at the metal center and showed distinct reactivity towards the biomolecules. In particular, the protein/DNA binding sites of RAPTA-C in a mixture of protein (ubiquitin) and oligonucleotide (5′-dATTGGCAC-3′) were located at single-amino acid and single-nucleotide resolution, respectively. Activated RAPTA-C bound selectively to Met1, adenine and cytosine in this setting, which contrasts with the selectivity of RM175 for guanine. Finally, activation products of NKP-1339 were detected corresponding to RuII(Hind)2 fragments coordinated to the oligonucleotide, which represents one of the few examples of a directly observed RuII adduct.



中文翻译:

通过竞争结合分析表征钌金属前药的激活机制和结合偏好

使用毛细管区带电泳质谱法(CZE-MS)以时间依赖的方式并暴露于蛋白质/寡核苷酸混合物中,详细研究了钌金属前药铅结构的活化机理和反应性。在竞争性测定用钠进行反式-将[RuCl 4(后)2 ],其中后腿=吲唑(NKP-1339),[(η 6 - p -cymene)的RuCl 2(PTA)],其中PTA = 1,3, 5-三氮杂-7-磷(RAPTA-C)和[(η 6 -联苯)的RuCl(1,2-乙二胺)] PF 6(RM175)。通过分别将CZE耦合到电喷雾电离MS(ESI-MS)和电感耦合等离子体MS(ICP-MS),可以获得有关结合偏好的分子和定量信息。提出了评分系统,该评分系统对Ru复合物与核苷酸的结合偏好进行排名,并证明了24小时后选择性降低的以下趋势:RM175(0.89)> RAPTA-C(0.78)> NKP-1339(0.40)。如预期的那样,候选有机金属药物RM175和RAPTA-C在金属中心进行了卤代/水配体交换反应,并显示出对生物分子的独特反应性。特别地,在蛋白质(遍在蛋白)和寡核苷酸(5'-dATTGGCAC-3')的混合物中,RAPTA-C的蛋白质/ DNA结合位点分别位于单氨基酸和单核苷酸分辨率。在这种情况下,活化的RAPTA-C与Met1,腺嘌呤和胞嘧啶选择性结合,这与RM175对鸟嘌呤的选择性形成对比。最后,检测到与Ru相对应的NKP-1339激活产物II(Hind)2片段与寡核苷酸配位,代表直接观察到的Ru II加合物的几个例子之一。

更新日期:2017-07-16
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