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Stemphylium revisited
Studies in Mycology ( IF 16.5 ) Pub Date : 2017-06-06 , DOI: 10.1016/j.simyco.2017.06.001
J.H.C. Woudenberg , B. Hanse , G.C.M. van Leeuwen , J.Z. Groenewald , P.W. Crous

In 2007 a new Stemphylium leaf spot disease of Beta vulgaris (sugar beet) spread through the Netherlands. Attempts to identify this destructive Stemphylium sp. in sugar beet led to a phylogenetic revision of the genus. The name Stemphylium has been recommended for use over that of its sexual morph, Pleospora, which is polyphyletic. Stemphylium forms a well-defined monophyletic genus in the Pleosporaceae, Pleosporales (Dothideomycetes), but lacks an up-to-date phylogeny. To address this issue, the internal transcribed spacer 1 and 2 and intervening 5.8S nr DNA (ITS) of all available Stemphylium and Pleospora isolates from the CBS culture collection of the Westerdijk Institute (N = 418), and from 23 freshly collected isolates obtained from sugar beet and related hosts, were sequenced to construct an overview phylogeny (N = 350). Based on their phylogenetic informativeness, parts of the protein-coding genes calmodulin and glyceraldehyde-3-phosphate dehydrogenase were also sequenced for a subset of isolates (N = 149). This resulted in a multi-gene phylogeny of the genus Stemphylium containing 28 species-clades, of which five were found to represent new species. The majority of the sugar beet isolates, including isolates from the Netherlands, Germany and the UK, clustered together in a species clade for which the name S. beticola was recently proposed. Morphological studies were performed to describe the new species. Twenty-two names were reduced to synonymy, and two new combinations proposed. Three epitypes, one lectotype and two neotypes were also designated in order to create a uniform taxonomy for Stemphylium.



中文翻译:

访茎秆

2007年,一个新的匍柄的叶斑病甜菜(甜菜)通过荷兰蔓延。试图鉴定这种破坏性的茎秆属菌。甜菜中的甜菜碱导致该属的系统发育改变。推荐使用Stemphylium这个名字,而不是它的多形性变种PleosporaStemphylium古菌PleosporalesDothideomycetes)中形成明确的一类属,但缺乏最新的系统发育。为了解决这个问题,内部转录的间隔区1和2以及所有可用的和叶中间的5.8S nr DNA(ITS)插入来自Westerdijk研究所的CBS培养物收集物(N = 418)以及从甜菜和相关寄主中获得的23种新鲜收集的分离物中的菌属菌株进行测序,以构建概述系统发育史(N = 350)。基于它们的系统发育信息,还对部分分离株的蛋白质编码基因钙调蛋白和甘油醛-3-磷酸脱氢酶的部分进行了测序(N = 149)。这导致了茎杆菌属的多基因系统发育,包含28个种系,其中5个被发现代表新种。大多数甜菜分离株,包括来自荷兰,德国和英国的分离株,聚集在一起,形成一个名为S. beticola的物种进化枝是最近提出的。进行了形态学研究以描述新物种。22个名称被简化为同义词,并提出了两个新的组合。还指定了三种表型,一种选型和两种新型,以便为Stemphylium创建统一的分类法。

更新日期:2017-06-06
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