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Next-Generation Sequencing and Result Interpretation in Clinical Oncology: Challenges of Personalized Cancer Therapy
Annual Review of Medicine ( IF 10.5 ) Pub Date : 2017-01-18 00:00:00 , DOI: 10.1146/annurev-med-102115-021556
Yekaterina B. Khotskaya 1 , Gordon B. Mills 1, 2 , Kenna R. Mills Shaw 1
Affiliation  

The tools of next-generation sequencing (NGS) technology, such as targeted sequencing of candidate cancer genes and whole-exome and -genome sequencing, coupled with encouraging clinical results based on the use of targeted therapeutics and biomarker-guided clinical trials, are fueling further technological advancements of NGS technology. However, NGS data interpretation is associated with challenges that must be overcome to promote the techniques' effective integration into clinical oncology practice. Specifically, sequencing of a patient's tumor often yields 30–65 somatic variants, but most of these variants are “passenger” mutations that are phenotypically neutral and thus not targetable. Therefore, NGS data must be interpreted by multidisciplinary decision-support teams to determine mutation actionability and identify potential “drivers,” so that the treating physician can prioritize what clinical decisions can be pursued in order to provide cancer therapy that is personalized to the patient and his or her unique genome.

中文翻译:


临床肿瘤学中的下一代测序和结果解释:个性化癌症治疗的挑战

下一代测序(NGS)技术的工具,例如候选癌症基因的靶向测序,全外显子组和-基因组测序,以及基于靶向治疗和生物标志物指导的临床试验的令人鼓舞的临床结果,正在助长该行业NGS技术的进一步技术进步。然而,NGS数据解释与必须克服的挑战有关,以促进该技术有效地整合到临床肿瘤学实践中。具体而言,对患者肿瘤进行测序通常会产生30–65个体细胞变异体,但是这些变异体中的大多数是“客体”突变,在表型上是中性的,因此无法靶向。因此,NGS数据必须由多学科决策支持团队进行解释,以确定突变的可操作性并确定潜在的“驱动因素”,

更新日期:2017-01-18
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