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Detection of Multiple HPV Types in Liquid Biopsies of Cervical Neoplasia
Clinical Chemistry ( IF 9.3 ) Pub Date : 2024-01-04 , DOI: 10.1093/clinchem/hvad182
Johanna Herbst 1 , Vanessa Vohl 1 , Maroje Krajina 2 , Markus Leffers 1 , Jolanthe Kropidlowski 1 , Katharina Prieske 3 , Anna Jaeger 3 , Leticia Oliveira Ferrer 3 , Barbara Schmalfeldt 3 , Yvonne Goy 4 , Eike Burandt 5 , Klaus Pantel 1 , Caren Vollmert 2 , Alexander Sartori 2 , Linn Woelber 3 , Katharina Effenberger 1 , Harriet Wikman 1
Affiliation  

Background More than 95% of cervical cancers and their precancerous lesions are caused by human papillomavirus (HPV). Cell-free (cf) HPV DNA detection in blood samples may serve as a monitoring tool for cervical cancer. Methods In our methodological study, an HPV panel for simultaneous detection of 24 types using mass spectrometry-based analysis was developed for liquid biopsy approaches and tested on HPV positive cell lines, plasmid controls, and cervical high-grade squamous intraepithelial lesions (HSIL) in positive smear samples (n = 52). It was validated in cfDNA blood samples (n = 40) of cervical cancer patients. Results The HPV panel showed proficient results in cell lines and viral plasmids with a limit of detection of 1 IU (international units)/µL for HPV16/18 and 10GE/µL for HPV11/31/33/39/45/51/52/58/59 and a specificity of 100% for the tested HPV types. In cervical smear samples, HPV DNA was detected with a sensitivity of 98.14%. The overall agreement between the new HPV panel and clinical records was 97.2% (κ = 0.84). In cervical cancer cfDNA, 26/40 (65.0%) tested positive for any HPV type, with most infections due to hrHPV (24/26). HPV positive samples were found in all FIGO stages, with the highest positivity ratio in FIGO III and IV. Even the lowest stage, FIGO I, had 12/23 (52.2%) patients with a positive HPV plasma status. Conclusions This proof-of-concept paper shows that the described assay produces reliable results for detecting HPV types in a multiplex mass spectrometry-based assay in cervical smear and cfDNA with high specificity and sensitivity in both cohorts. The assay shows potential for liquid biopsy-based applications in monitoring cervical cancer progression.

中文翻译:

宫颈肿瘤液体活检中多种 HPV 类型的检测

背景 95%以上的宫颈癌及其癌前病变是由人乳头瘤病毒(HPV)引起的。血液样本中的无细胞 (cf) HPV DNA 检测可作为宫颈癌的监测工具。方法 在我们的方法学研究中,针对液体活检方法开发了一种使用基于质谱分析同时检测 24 种类型的 HPV 检测组,并在 HPV 阳性细胞系、质粒对照和宫颈高级鳞状上皮内病变 (HSIL) 中进行了测试。阳性涂片样本 (n = 52)。它在宫颈癌患者的 cfDNA 血液样本 (n = 40) 中得到了验证。结果 HPV panel 在细胞系和病毒质粒中显示出良好的结果,HPV16/18 的检测限为 1 IU(国际单位)/μL,HPV11/31/33/39/45/51/52/ 的检测限为 10GE/μL。 58/59,所测试 HPV 类型的特异性为 100%。在宫颈涂片样本中,HPV DNA 的检测灵敏度为 98.14%。新的 HPV 检测结果与临床记录之间的总体一致性为 97.2% (κ = 0.84)。在宫颈癌 cfDNA 中,26/40 (65.0%) 的任何 HPV 类型检测呈阳性,其中大多数感染由 hrHPV (24/26) 引起。所有FIGO阶段均发现HPV阳性样本,其中FIGO III和IV阶段阳性率最高。即使是最低阶段,FIGO I,也有 12/23 (52.2%) 的患者 HPV 血浆状态呈阳性。结论 这篇概念验证论文表明,在基于宫颈涂片和 cfDNA 的多重质谱检测中,所描述的检测方法在检测 HPV 类型方面产生了可靠的结果,在两个队列中具有高特异性和敏感性。该测定显示了基于液体活检的应用在监测宫颈癌进展方面的潜力。
更新日期:2024-01-04
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