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Cell-free extract based optimization of biomolecular circuits with droplet microfluidics
Lab on a Chip ( IF 6.1 ) Pub Date : 2017-08-03 00:00:00 , DOI: 10.1039/c7lc00552k
Yutaka Hori 1, 2, 3, 4 , Chaitanya Kantak 4, 5, 6, 7, 8 , Richard M. Murray 1, 2, 3, 4 , Adam R. Abate 4, 5, 6, 7, 8
Affiliation  

Engineering an efficient biomolecular circuit often requires time-consuming iterations of optimization. Cell-free protein expression systems allow rapid testing of biocircuits in vitro, speeding the design–build–test cycle of synthetic biology. In this paper, we combine this with droplet microfluidics to densely scan a transcription–translation biocircuit space. Our system assays millions of parameter combinations per hour, providing a detailed map of function. The ability to comprehensively map biocircuit parameter spaces allows accurate modeling to predict circuit function and identify optimal circuits and conditions.

中文翻译:

基于无细胞提取物的微滴微流体优化生物分子回路

设计高效的生物分子电路通常需要耗时的优化迭代。无细胞蛋白质表达系统可以在体外快速测试生物电路,从而加快合成生物学的设计,构建和测试周期。在本文中,我们将其与液滴微流体相结合以密集扫描转录-翻译生物回路空间。我们的系统每小时分析数百万个参数组合,提供详细的功能图。全面映射生物电路参数空间的能力允许进行精确建模,以预测电路功能并确定最佳电路和条件。
更新日期:2017-09-12
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