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A cross-platform metabolomics workflow for volume-restricted tissue samples: application to an animal model for polycystic kidney disease
Molecular BioSystems Pub Date : 2017-08-02 00:00:00 , DOI: 10.1039/c7mb00245a
E. Sánchez-López 1, 2, 3, 4, 5 , H. Happé 6, 7, 8, 9 , E. Steenvoorden 7, 8, 9, 10 , A. L. Crego 1, 2, 3, 4, 5 , M. L. Marina 1, 2, 3, 4, 5 , D. J. M. Peters 6, 7, 8, 9 , O. A. Mayboroda 7, 8, 9, 10
Affiliation  

Metabolic profiling provides an unbiased view of the physiological status of an organism as a “function” of the metabolic composition of a measured sample. Here, we propose a simple LC-MS based workflow for metabolic profiling of volume-restricted samples, namely individual 20 μm-thick histological sections of a mouse kidney. The main idea of this workflow is to re-use the material after an RPLC-MS run, namely using the volume remaining in the vial after injection, and then introducing a phase changing step to enable HILIC-MS analysis. To test the applicability of the workflow and its ability to extract valuable biological information, we applied it to an animal model of polycystic kidney disease (PKD).

中文翻译:

体积受限组织样品的跨平台代谢组学工作流程:在多囊肾疾病动物模型中的应用

代谢谱分析提供了生物体生理状态作为被测样品代谢成分的“功能”的无偏见。在这里,我们提出了一个基于LC-MS的简单工作流程,用于体积受限样品的代谢谱分析,即小鼠肾脏的20μm厚的组织切片。该工作流程的主要思想是在RPLC-MS运行后重新使用材料,即使用注射后小瓶中剩余的体积,然后引入相变步骤以进行HILIC-MS分析。为了测试工作流程的适用性及其提取有价值的生物学信息的能力,我们将其应用于多囊肾疾病(PKD)的动物模型。
更新日期:2017-08-18
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