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Yan Huili*, Wenxiu Xu*, Jianyin Xie*, Yiwei Gao, Lulu Wu, Liang Sun, Lu Feng, Xu Chen, Tian Zhang, Changhua Dai, Ting Li, Xiuni Lin, Zhanying Zhang, Xueqiang Wang, Fengmei Li, Xiaoyang Zhu, Jinjie Li, Zichao Li, Caiyan Chen, Mi Ma, Hongliang Zhang**,?Zhenyan He**. Variation of a major facilitator superfamily gene contributes to differential cadmium accumulation between rice subspecies. Nature Communications, 2019, 10: 2562
Chunchao Wang, Hong Yu, Ji Huang, Wensheng Wang, Muhiuddin Faruquee, Fan Zhang, Xiuqin Zhao, Binying Fu, Kai Chen, Hongliang Zhang, Shuaishuai Tai, Chaochun Wei, Kenneth L Mcnally, Nickolai Alexandrov, Xiuying Gao, Jiayang Li, Zhikang Li, Jianlong Xu, Tianqing Zheng. Towards a deeper haplotype mining of complex traits in rice with RFGB v2.0. Plant Biotechnology Journal, 2019, DOI: 10.1111/pbi.13215
Xie Jianyin, Fengmei Li, Najeeb Ullah Khan, Xiaoyang Zhu, Xueqiang Wang, Zhifang Zhang, Xiaoqian Ma, Yan Zhao, Quan Zhang, Shuyang Zhang, Zhanying Zhang, Jinjie Li, Zichao Li, Hongliang Zhang**, Identifying natural genotypes of grain number per panicle in rice (Oryza sativa L.) by association mapping. Genes & Genomics, 2019, 41(3): 283–295
Yu Jianping*, Jinli Miao*, Zhanying Zhang, Haiyan Xiong, Xiaoyang Zhu, Xingming Sun, Yinghua Pan, Yuntao Liang, Qiang Zhang, M.A.R. Rashid, Jinjie Li1, Hongliang Zhang**, Zichao Li**. Alternative splicing of OsLG3b controls grain length and yield in japonica rice. Plant Biotechnology Journal, 2018, 16(9): 1667–1678
Li Fengmei, Jianyin Xie, Xiaoyang Zhu, Xueqiang Wang, Yan Zhao, Xiaoqian Ma, Zhanying Zhang, Muhammad A. R. Rashid, Zhifang Zhang, Linran Zhi, Shuyang Zhang, Jinjie Li, Zichao Li and Hongliang Zhang** . Genetic Basis Underlying Correlations Among Growth Duration and Yield Traits Revealed by GWAS in Rice (Oryza sativa L.). Frontiers in Plant Science, 2018, 9(5): doi: 10.3389/fpls.2018.00650
Zhao Yan*, Hongliang Zhang*, Jianlong Xu*, Conghui Jiang, Zhigang Yin, Haiyan Xiong, Jianyin Xie, Xueqiang Wang, Xiaoyang Zhu, Yang Li, Weipeng Zhao, Muhammad Abdul Rehman Rashid, Jinjie Li, Wensheng Wang, Binying Fu, Guoyou Ye, Yan Guo, Zhiqiang Hu, Zhikang Li** & Zichao Li**. Loci and natural alleles underlying robust roots and adaptive domestication of upland ecotype rice in aerobic conditions. PLoS Genet, 2018, 14(8): e1007521
Haiyan Xiong*, Jianping Yu*, Jinjie Li, Hongliang Zhang, Xin Wang, Pengli Liu, Jinli Miao,Yan Zhao, Chonghui Jiang, Zhigang Yin, Yang Li, Yan Guo, Binying Fu, Wensheng Wang, Zhikang Li, Jauhar Ali and Zichao Li**. Natural Variation in OsLG3 Increases Drought Tolerance in Rice by Inducing ROS Scavenging. Plant Physiology, 2018, 178(1): 451-467
Wensheng Wang*, Ramil Mauleon*, Zhiqiang Hu*, Dmytro Chebotarov*, Shuaishuai Tai*, Zhichao Wu*, Min Li*, Tianqing Zheng*, Roven Rommel Fuentes*, Fan Zhang*, Locedie Mansueto, Dario Copetti, Millicent Sanciangco, Kevin Christian Palis, Jianlong Xu, Chen Sun3, Binying Fu, Hongliang Zhang, Yongming Gao, Xiuqin Zhao, Fei Shen, Xiao Cui, Hong Yu, Zichao Li, Miaolin Chen, Jeffrey Detras, Yongli Zhou, Xinyuan Zhang, Yue Zhao, Dave Kudrna, Chunchao Wang, Rui Li, Ben Jia, Jinyuan Lu, Xianchang He, Zhaotong Dong, Jiabao Xu, Yanhong Li, Miao Wang, Jianxin Shi, Jing Li, Dabing Zhang, Seunghee Lee, Wushu Hu, Alexander Poliakov, Inna Dubchak, Victor Jun Ulat, Frances Nikki Borja, John Robert Mendoza, Jauhar Ali, Jing Li, Qiang Gao, Yongchao Niu, Zhen Yue, Ma. Elizabeth B. Naredo, Jayson Talag, Xueqiang Wang, Jinjie Li, Xiaodong Fang, Ye Yin, Jean-Christophe Glaszmann, Jianwei Zhang, Jiayang Li, Ruaraidh Sackville Hamilton, Rod A. Wing**, Jue Ruan**, Gengyun Zhang**, Chaochun Wei**, Nickolai Alexandrov**, Kenneth L. McNally**, Zhikang Li** & Hei Leung. Genomic variation in 3,010 diverse accessions of Asian cultivated rice. Nature, 2018, 557: 43-49
Sun Xingming*, Zhanying Zhang*, Chao Chen*, Wei Wu, Nannan Ren, Conghui Jiang, Jianping Yu, Yan Zhao, Xiaoming Zheng, Qingwen Yang, Hongliang Zhang, Jinjie Li and Zichao Li**.The C-S-A gene system regulates hull pigmentation and reveals evolution of anthocyanin biosynthesis pathway in rice. Journal of Experimental Botany, 2018, 69(7): 1485–1498
Yu Jianping*, Haiyan Xiong*, Xiaoyang Zhu*, Hongliang Zhang, Huihui Li, Jinli Miao, Wensheng Wang, Zuoshun Tang, Zhanying Zhang, Guoxin Yao, Qiang Zhang, Yinghua Pan, Xin Wang, M.A.R. Rashid, Jinjie Li, Yongmin Gao, Zhikang Li, Weicai Yang, Xiangdong Fu, Zichao Li**. OsLG3 contributing to rice grain length and yield was mined by Ho-LAMap. BMC Biology, 2017, DOI : 10.1186/s12915-017-0365-7
Wu Jiantao, Yongwen Qi, Guanglong Hu, Jinjie Li, Zichao Li, Hongliang Zhang**. Genetic architecture of flag leaf length and width in rice (Oryza sativa L.) revealed by association mapping. Genes & Genomics, 2017, 39: 341–352
Zhanying Zhang*, Jinjie Li*, Yinghua Pan*, Jilong Li*, Lei Zhou*, Hongli Shi*, Yawen Zeng, Haifeng Guo, Shuming Yang, Weiwei Zheng, Jianping Yu, Xingming Sun, Gangling Li, Yanglin Ding, Liang Ma, Shiquan Shen, Luyuan Dai, Hongliang Zhang, Shuhua Yang, Yan Guo, Zichao Li**. Natural variation in CTB4a enhances rice adaptation to cold habitats, Nature Communications, 2017, 8: 14788
Zhanying Zhang*, Jinjie Li*, Zuoshun Tang*, Hongliang Zhang, Xingming Sun, Jianping Yu, Guoxin Yao, Gangling Li, Haifeng Guo, Jilong Li, Huamao Wu, Hanguang Huang, Yawen Xu, Zhigang Yin, Yanhua Qi, Rongfeng Huang, Weicai Yang and Zichao Li**.Gnp4/LAX2, a RAWUL Protein, Modulates Grain Length by Interfering with OsIAA3-OsARF25Interaction in Rice. Journal of Experimental Botany, 2018, 20(69): 4723-4737
Pan Yinghua*, Hongliang Zhang*, Dongling Zhang, Jinjie Li, Haiyan Xiong, Jianping Yu, Jilong Li, Muhammad Abdul Rehman Rashid, Gangling Li, Xiaoding Ma, Guilan Cao, Longzhi Han**, Zichao Li**. Genetic Analysis of Cold Tolerance at the Germination and Booting Stages in Rice by Association Mapping. PLoS ONE, 2015, 10(3): e0120590
郑天清*, 余泓*, 张洪亮*, 吴志超*, 王文生*, 太帅帅, 迟璐, 阮珏, 韦朝春, 石建新, 高用明, 傅彬英, 周永力, 赵秀琴, 张帆, McNally, Kenneth, L., 李自超, 张耕耘, 李家洋, 张大兵, 徐建龙**, 黎志康**. 水稻功能基因组育种数据库(RFGB): 3K水稻SNP与InDel 子数据库. 科学通报, 2015, 60(4): 367-371
Guo Yu, Hui Yuan, Dongming Fang, Lianbo Song, Yan Liu, Yong Liu, Lu Wu, Jianping Yu, Zichao Li, XunXu**, Hongliang Zhang**. An improved 2b-RAD approach offering genotyping tested by a rice (Oryza sativa L.) F2 population. BMC Genomics, 2014, 15: 956
Zhang Dongling*, Zhang Hongliang**, Qi Yongwen, Wang Meixing, Sun Junli, Ding Li, Li Zichao**. Genetic Structure and Eco-geographical Differentiation of Cultivated Hsien Rice (Oryza sativa L. Subsp. Indica) in China Revealed by Microsatellites. Chinese Sci Bull, 2013, 58: 344-352
Zhang Dongling, Wang Meixing, Qi Yongwen, Sun Junli, Wang Fengmei, Li Jinjie, Zhang Hongliang**, Li Zichao**. Genetic Structure and Eco-geographical Differentiation of Cultivated Keng Rice (Oryza sativa L. Subsp. Japonica) in China Revealed by Microsatellites. Journal of Integrative Agriculture, 2012, 11: 1755–1766
Duan Junzhi, Minghui Zhang, Hongliang Zhang, Haiyan Xiong, Pengli Liu, Jauhar Ali, Jinjie Li , Zichao Li. OsMIOX, a myo-inositol oxygenase gene, improves drought tolerance through scavenging of reactive oxygen species in rice (Oryza sativa L.). Plant Science, 2012, 196: 143-151
Longin Carl Friedrich Horst, Jonathan Mu¨ hleisen, Hans Peter Maurer, Hongliang Zhang, Manje Gowda, Jochen Christoph Reif. Hybrid breeding in autogamous cereals. Theoretical & Applied Genetics, 2012, 125: 1087-1096
Hu Guanglong, Zhang Dongling, Pan Huiqiao, Li Ben, Wu Jiantao, Zhou Xueya, Zhang Qunyuan, Zhou Lei, Yao Guoxin, Li Junzhou, Li Jinjie, Zhang Hongliang**, Li Zichao**. Fine mapping of the awn gene on chromosome 4 in rice by association and linkage analyses. Chinese Science Bulletin, 2011, 56(9): 835-839
Li Jinjie, Hongliang Zhang, Bo Tang, Chao Chen, Dongling Zhang, Minghui Zhang, Junzhi Duan, Haiyan Xiong, Huiqiao Pan, Bin Liu, Zichao Li. Rice Omics and biotechnology in China. Plant Omics, 2011, 4(6):302-317
Zhang Hongliang*, Dongling Zhang*, Meixing Wang, Junli Sun, Yongwen Qi, Jinjie Li, Xinghua Wei, Longzhi Han, Zongen Qiu, Shengxiang Tang, Zichao Li**. A Core Collection and Mini Core Collection of Oryza sativa L. in China. Theoretical and Applied Genetics, 2011, 122(1): 49-61
Gao Fenghua, Hongliang Zhang, Haiguang Wang, Hong Gao, Zichao Li. Comparative transcriptional profiling under drought stress between upland and lowland rice (Oryza sativa L.) using cDNA-AFLP. Chinese Science Bulletin, 2009, 54: 3555-3571
Qi Yongwen, Hongliang Zhang, Dongling Zhang, Meixing Wang, Junli Sun, Li Ding, X inghua Wei, Sengxiang Tang, Longzhi Han, Xiangkun Wang and Zichao Li. Assessing indica-japonica differentiation of improved rice varieties (Oryza sativa L.) using microsatellite markers. Journal of Genetics and Genomics, 2009, 36 (5): 305-312
Zeng Yawen, Hongliang Zhang, Luxiang Wang, Xiaoying Pu, Juan Du, Shuming Yang, Jiafu Liu. Genotypic variation in element concentrations in brown rice from Yunnan landraces in China. Environmental Geochemistry and Health, 2010, 32(3):165-77
Zhang Dongling, Zhang Hongliang**, Wang Meixing, Sun Junli, Qi Yongwen, Wang Fengmei, Wei Xinghua, Han Longzhi, Wang Xiangkun, Li Zichao**. Genetic Structure and Differentiation of Oryza sativa L. in China Revealed by Microsatellites. Theoretical and Applied Genetics, 2009, 116(6): 1105-1117
WANG MeiXing, ZHANG HongLiang**, ZHANG DongLing, PAN DaJian, LI DaoYuan, FAN ZhiLan, QI YongWen, SUN JunLi, YANG QingWen, LI Chen, LI ZiChao**. Geographical genetic diversity and divergence of common wild rice (O. rufipogon Griff.) in China. Chinese Science Bulletin, 2008, 53: 3559-3566
Wang Meixing*, Hongliang Zhang*, Dongling Zhang, Yongwen Qi, Zhilan Fan, Daoyuan Li, Dajian Pan, Yongsheng Cao, Zongen Qiu, Ping Yu, Qingwen Yang, Xiangkun Wang, Zichao Li. Genetic Structure of Oryza rufipogon Griff. in China. Heredity, 2008, 101: 527-535
廖登群, 张洪亮, 李自超**，Bennett John. 水稻(Oryza sativa L.)α-淀粉酶基因的进化及组织表达模式. 作物学报, 2010, 36(1): 1-12
廖登群, 张洪亮, 李自超**，Bennett John. 水稻β-淀粉酶基因密码子使用特性分析. 中国农业大学学报, 2009, 14: 1-11
Wang Haiguang, Hongliang Zhang, Fenghua Gao, Junxia Li, Zichao Li. Comparison of gene expression between upland and lowland rice cultivars under water stress using cDNA microarray. Theoretical & Applied Genetics, 2007, 115(8): 1109–1126
Wang Haiguang, Hongliang Zhang, Zichao Li. Analysis of Gene Expression Profile Induced by Water Stress in Upland Rice (Oryza sativa L. var. IRAT109) Seedlings using Subtractive Expressed Sequence Tags Library. Journal of Integrative Plant Biology, 2007, 49 (10): 1455–1463
Zhang Hongliang, Junli Sun, Meixing Wang, Dengqun Liao, Yawen Zeng, Shiquan Shen, Ping Yu, Ping Mu, Xiangkun Wang & Zichao Li**. Genetic Structure and Phylogeography of Rice Landraces in Yunnan, China Revealed by SSR. Genome, 2007, 51(1): 72-83
Zhang Dongling*, Zhang Hongliang*, Wei Xinghua*, Qi Yongwen, Wang Meixing, Sun Junli, Ding Li, Tang Shengxiang, Qiu Zongen, Cao Yongsheng, Wang Xiangkun and Li Zichao**. Genetic Structure and Diversity of Oryza sativa L. in Guizhou, China. Chinese Science Bulletin, 2007, 52(3): 343-351
Zeng Yawen*, Zhang Hongliang*, Li Zichao Shen Shiquan, Sun Junli, Wang Meixing, Liao Dengqun, Liu Xia, Wang Xiangkun, Xiao Fenghui and Wen Guosong. Evaluation of Genetic Diversity of Rice Landraces (Oryza sativa L.) in Yunnan, China. Breeding Science, 2007, 57: 91-99
Qi Yongwen, Zhang dongling, Zhong Hongliang, Wang Meixing, Sun Junli, Wei Xinghua, Qiu Zongen, Tang Shengxiang,Cao Yongsheng, Wang Xiangkun and Li Zichao. 2006. Genetic diversity of rice cultivars (Oryza sativa L.) in China and the temporal trends in recent fifty years. Chinese Science Bulletin, 2006, 51(6): 681-688
Li Junxia, Min Senggeng, Zhang Hongliang, Yan Yanlu, Luo Changbing and Li Zichao. The PLS calibration model optimization and determination of rice protein content by near-infrared reflectance spectroscopy. Spectroscopy and Spectral Analysis, 2006, 26(5): 833-837
MU Ping, ZHANG Hong-liang, Jiang De-feng, LIU Li-feng, LI Zi-chao. QTL Mapping and Interactions Between QTL and Environment for Yield and Its Components Using a DH Population Derived from a Lowland and Upland Rice Cross. Scientia Agricultura Sinica, 2005, 38(9): 1725-1733 (in Chinese)
Zhang Hongliang, Zichao Li, Dongling Zhang, Junli Sun, Meixing Wang, Yongwen Qi, Xiangkun Wang. SSR markers in sampling a core collection and estimating the genetic diversity, Symposium of the 4th International Crop Science Congress, September 2004, Brisbane, Austialia (http://www.cropscience.org.au/icsc2004/poster/3/3/1/1352_zhanghl.htm)
Zhang Hong-Liang, Li Zi-Chao, Liao Deng-Qun, Liu Xia, Zeng Ya-Wen, Shen Shi-Quan, Mu Ping, Yang Zhong-Yi, Wang Xiang-Kun, Wang Xiang-Kun. Microsatellite analysis of landrace rice core collection in Yunnan, China. Chinese Journal of Agricultural Biotechnology, 2004, 1: 23-30
Zhang Hongliang, Li Zichao, Cao Yongsheng, Qiu Zongen, Yu Ping And Wang Xiangkun. Comparison of Parameters for Testing the Rice Core Collection in Phenotype. Acta Agronomica Sinica, 2003, 29(2): 252-257 (in Chinese)
Li Zichao, Zhang Hongliang, Yawen Zeng, Zhongyi Yang, Shiquan Shen, Chuanqing Sun and Xiangkun Wang. Studies on sampling stratyges for establishment of core collection of rice landrace in Yunnan, China. Genetic resources and crop evolution, 2002, 49(1): 67-74
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