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1. Zheng W†, Dong J†, Chen Z, Deng X, Wu Q, Rodewald LE, Yu H*. Global landscape of COVID-19 vaccination programs for older adults: a descriptive study. Lancet Healthy Longev. 2024. 5(11):100646
2. Chen Z, Tsui JL, Gutierrez B, Busch-Moreno S, du Plessis L, Deng X, Cai J, Bajaj S, Suchard MA, Pybus OG*, Lemey P*, Kraemer MUG*, Yu H*. COVID-19 pandemic interventions reshaped the global dispersal of seasonal influenza viruses. Science. 2024. 386:eadq3003.
3. Wang W, O'Driscoll M, Wang Q, Zhao S, Salje H*, Yu H*. Dynamics of measles immunity from birth and following vaccination. Nat Microbiol. 2024;9(7):1676-1685.
4. Chen Z, Lemey P, Yu H*. Approaches and challenges to inferring the geographical source of infectious disease outbreaks using genomic data. Lancet Microbe. 2024; 5(1):e81-e92.
5. Zhang J†, Tan S†, Peng C, Xu X, Wang M, Lu W, Wu Y, Sai B, Cai M, Kummer AG, Chen Z, Zou J, Li W, Zheng W, Liang Y, Zhao Y, Vespignani A, Ajelli M, Lu X*, Yu H*. Heterogeneous changes in mobility in response to the SARS-CoV-2 Omicron BA.2 outbreak in Shanghai. 2023; 120(42):e2306710120.
6. Li M†, Wang W†, Chen J†, Zhan Z, Xu M, Liu N, Ren L, You L, Zheng W, Shi H, Zhao Z, Huang C, Chen X, Zheng N, Lu W, Zhou X, Zhou J, Liao Q, Yang J, Jit M, Salje H, Yu H*. The transplacental transfer efficiency of maternal antibodies against influenza A(H1N1)pdm09 virus, and dynamics of naturally acquired antibodies in Chinese children: A longitudinal, paired mother–neonate cohort study. Lancet Microbe. 2023; 4(11):e893-e902.
7. Wang Q†, Wang W†, Winter AK†, Zhan Z†, Ajelli M, Trentini F, Wang L, Li F, Yang J, Xiang X, Liao Q, Zhou J, Guo J, Yan X, Liu N, Metcalf CJE, Grenfell BT, Yu H*. Long-term measles antibody profiles following different vaccine schedules in China, a longitudinal study. Nat Commun. 2023; 14(1):1746.
8. Yang J†, Liao Q†, Luo K†, Liu F†, Zhou Y†, Zou G†, Huang W, Yu S, Wei X, Zhou J, Dai B, Qiu Q, Altmeyer R, Hu H, Paireau J, Luo L, Gao L, Nikolay B, Hu S, Xing W, Wu P, van Doorn HR, Horby PW, Simmonds P, Leung GM, Cowling BJ, Cauchemez S, Yu H*. Seroepidemiology of children with enterovirus A71 infections in southern China: longitudinal, population-based cohort studies, 2013-2018. Nat Commun. 2022; 13(1):7280.
9. Cai J†, Deng X†, Yang J†, Sun K, Liu H, Chen Z, Peng C, Chen X, Wu Q, Zou J, Sun R, Zheng W, Zhao Z, Lu W, Liang Y, Zhou X, Ajelli M, Yu H*. Modeling transmission of SARS-CoV-2 Omicron in China. Nat Med. 2022 Jul;28(7):1468-1475. (ESI highly cited paper)
10. Chen Z, Azman AS, Chen X, Zou J, Tian Y, Sun R, Xu X, Wu Y, Lu W, Ge S, Zhao Z, Yang J, Leung DT, Domman DB, Yu H*. Global landscape of SARS-CoV-2 genomic surveillance and data sharing. Nat Genet. 2022; 54(4):499-507. (ESI highly cited paper)
11. Zeng G†, Wu Q†, Pan H†, Li M†, Yang J†, Wang L, Wu Z, Jiang D, Deng X, Chu K, Zheng W, Wang L, Lu W, Han B, Zhao Y*, Zhu F*, Yu H*, Yin W*. Immunogenicity and safety of a third dose and immune persistence of CoronaVac vaccine in healthy adults: interim results from two single center, double-blind, randomized, placebo-controlled phase 2 clinical trials. Lancet Infect Dis. 2022; 22(4):483-495. (ESI highly cited paper) (ESI hot paper)
12. Yang J†, Marziano V†, Deng X, Guzzetta G, Zhang J, Trentini F, Cai J, Poletti P, Zheng W, Wang W, Wu Q, Zhao Z, Dong K, Zhong G, Viboud C, Merler S, Ajelli M*, Yu H*. Despite vaccination, China will have to maintain non-pharmaceutical interventions to prevent widespread outbreaks of COVID-19 in 2021. Nat Hum Behav. 2021 2021;5(8):1009-1020.
13. Zhang J, Litvinova M, Liang Y, Zheng W, Shi H, Vespignani A, Viboud C, Ajelli M*, Yu H*. The impact of relaxing interventions on human contact patterns and SARS-CoV-2 transmission in China. Sci Adv. 2021; 7(19): eabe2584.
14. Sun K†, *, Wang W†, Gao L†, Wang Y, Luo K, Ren L, Zhan Z, Chen X, Zhao S, Huang Y, Sun Q, Liu Z, Litvinova M, Vespignani A, Ajelli M, Viboud C, Yu H*. Transmission heterogeneities, kinetics, and controllability of SARS-CoV-2. Science. 2021;371(6526): eabe2424. (ESI highly cited paper)
15. Wei X†, Yang J†, Gao L†, Wang L†, Liao Q†, Qiu Q, Luo K, Yu S, Zhou Y, Liu F, Chen Q, Zhang J, Dai B, Yang H, Zhou J, Xing W, Chen X, He M, Ren L, Guo J, Luo L, Wu P, Chen Z, van Doorn HR, Cauchemez S, Cowling BJ, Yu H*. The transfer and decay of maternal antibodies against enterovirus A71, and dynamics of antibodies due to later natural infections in Chinese infants: a longitudinal, paired mother-neonate cohort study. Lancet Infect Dis. 2021;21(3):418-426.
16. Chen X†, Chen Z†, Azman AS†, Deng X, Sun R, Zhao Z, Zheng N, Chen X, Lu W, Zhuang T, Yang J, Viboud C, Ajelli M, Leung DT, Yu H*. Serological evidence of human infection with SARS-CoV-2: a systematic review and meta-analysis. Lancet Glob Health. 2021;9(5): e598-e609. (ESI highly cited paper)
17. Hu S†, Wang W†, Wang Y†, Litvinova M†, Luo K, Ren L, Sun Q, Chen X, Zeng G, Li J, Liang L, Deng Z, Zheng W, Li M, Yang H, Guo J, Wang K, Chen X, Liu Z, Yan H, Shi H, Chen Z, Zhou Y, Sun K, Vespignani A, Viboud C, Gao L*, Ajelli M*, Yu H*. Infectivity, susceptibility, and risk factors associated with SARS-CoV-2 transmission under intensive contact tracing in Hunan, China. Nat Commun. 2021;12(1):1533. (ESI highly cited paper)
18. Wang W, Wu Q, Yang J, Dong K, Chen X, Bai X, Chen X, Chen Z, Viboud C, Ajelli M, Yu H*. Global, regional, and national estimates of target population sizes for COVID-19 vaccination. BMJ. 2020;371:m4704.
19. Zhang J, Litvinova M, Liang Y, Wang Y, Wang W, Zhao S, Wu Q, Merler S, Viboud C, Vespignani A, Ajelli M*, Yu H*. Changes in contact patterns shape the dynamics of the COVID-19 outbreak in China. Science. 2020; 368 (6498): 1481-1486. (ESI highly cited paper)
20. Zhang J†, Litvinova M†, Wang W†, Wang Y, Deng X, Chen X, Li M, Zheng W, Yi L, Chen X, Wu Q, Liang Y, Wang X, Yang J, Sun K, Longini Jr IM, Halloran ME, Wu P, Cowling BJ, Merler S, Viboud C, Vespignani A, Ajelli M*, Yu H*. Evolving epidemiology and transmission dynamics of novel coronavirus disease 2019 outside Hubei Province in China: a descriptive and modeling study. Lancet Infect Dis. 2020; 20 (7): 793-802. (ESI highly cited paper)
21. Li Y†, Zhou Y†, Cheng Y†, Wu P, Zhou C, Cui P, Song C, Liang L, Wang F, Qiu Q, Guo C, Zeng M, Long L, Cowling BJ, Yu H*. Effectiveness of EV-A71 vaccination in prevention of paediatric hand, foot, and mouth disease associated with EV-A71 virus infection requiring hospitalisation in Henan, China, 2017-18: a test-negative case-control study. Lancet Child Adolesc Health. 2019; 3(10): 697-704.
22. Li L†, Liu Y†, Wu P†, Peng Z†, Wang X, Tao Chen, Jessica Y. T. Wong, Juan Yang, Helen S. Bond, Lijun Wang, Yiu Chung Lau, Jiandong Zheng, Shuo Feng, Ying Qin, Vicky J. Fang, Hui Jiang, Eric H. Y. Lau, Shiwei Liu, Jinlei Qi, Juanjuan Zhang, Jing Yang, Yangni He, Maigeng Zhou, Benjamin J. Cowling, Feng L*, Yu H*. Influenza-associated excess respiratory mortality in China, 2010-15: a population-based study. Lancet Public Health. 2019; 4: e473–81. (ESI highly cited paper)
23. Oidtman RJ, Lai S, Huang Z, Yang J, Siraj AS, Reiner RC, Tatem AJ, Perkins TA*, Yu H*. Inter-annual variation in seasonal dengue epidemics driven by multiple interacting factors in Guangzhou, China. Nat Commun. 2019; 10:1148.
24. Wang X†, Jiang H†, Wu P†, Uyeki TM†, Feng L, Lai S, Wang L, Huo X, Xu K, Chen E, Wang X, He J, Kang M, Zhang R, Zhang J, Wu J, Hu S, Zhang H, Liu X, Fu W, Ou J, Wu S, Qin Y, Zhang Z, Shi Y, Zhang J, Artois J, Fang VJ, Zhu H, Guan Y, Gilbert M, Horby PW, Leung GM, Gao GF, Cowling BJ, Yu H*. Epidemiology of avian influenza A H7N9 virus in human beings across five epidemics in mainland China, 2013–17:an epidemiological study of laboratory-confirmed case series. Lancet Infect Dis. 2017;17(8):822-832. (ESI highly cited paper)
25. Lai S†, Qin Y†, Cowling BJ†, Ren X, Wardrop NA, Gilbert M, Tsang TK, Wu P, Feng L, Jiang H, Peng Z, Zheng J, Li S, Horby PW, Farrar JJ, Gao GF, Tatem AJ, and Yu H*. Global epidemiology of avian influenza A H5N1 virus infection in humans, 1997 – 2015: a systematic review of individual case data. Lancet Infect Dis. 2016; 16: e108-18.
26. Wu JT†, *, Jit M†, Zheng Y†, Leung K, Xing W, Yang J, Liao Q, Cowling BJ, Yang B, Lau EHY, Takahashi S, Farrar JJ, Grenfell BT, Leung GM, and Yu H*. Routine pediatric enterovirus 71 vaccination in China: a cost-effectiveness analysis. PLoS Med. 2016; 13(3): e1001975.
27. Takahashi S, Liao Q, Boechel TPV, Xing W, Sun J, Hsiao VY, Metcalf CJE, Chang Z, Liu F, Zhang J, Wu JT, Cowling BJ, Leung GM, Farrar JJ, van Doom HR, Grenfell BT*, and Yu H*. Hand, foot, and mouth disease in China: modelling epidemic dynamics of enterovirus serotypes and implications for vaccination. PLoS Med. 2016; 13(2): e1001958.
28. Xing W†, Liao Q†, Viboud C†, Zhang J†, Sun J, Wu J T, Chang Z, Liu F, Fang VJ, Zheng Y, Cowling BJ, Varma JK, Farrar JJ, Leung GM*, and Yu H*. Hand, foot, and mouth disease in China, 2008-12: an epidemiological study. Lancet Infect Dis. 2014; 14 (4): 308-18. (ESI highly cited paper)
29. Gilbert M*, Golding N*, Zhou H, Wint GR, Robinson TP, Tatem AJ, Lai S, Zhou S, Jiang H, Guo D, Huang Z, Messina JP, Xiao X, Linard C, Van Boeckel TP, Martin V, Bhatt S, Gething PW, Farrar JJ, Hay SI, and Yu H*. Predicting the risk of avian influenza A H7N9 infection in live-poultry markets across Asia. Nat Commun. 2014; 5: 4116.
30. Yu H†, Wu JT†, Cowling BJ*, Liao Q, Fang VJ, Zhou S, Wu P, Zhou H, Lau EH, Guo D, Ni MY, Peng Z, Feng L, Jiang H, Luo H, Li Q, Feng Z, Wang Y*, and Leung GM. Effect of closure of live poultry markets on poultry-to-person transmission of avian influenza A H7N9 virus: an ecological study. Lancet. 2014; 383 (9916): 541-8. (ESI highly cited paper)
31. Ip DK, Liao Q, Wu P, Gao Z, Cao B, Feng L, Xu X, Jiang H, Li M, Bao J, Zheng J, Zhang Q, Chang Z, Li Y, Yu J, Liu F, Ni M Y, Wu J T, Cowling BJ, Yang W, Leung GM*, and Yu H*. Detection of mild to moderate influenza A/H7N9 infection by China's national sentinel surveillance system for influenza-like illness: case series. BMJ. 2013; 346: f3693.
32. Cowling BJ†, Jin L†, Lau EH, Liao Q, Wu P, Jiang H, Tsang TK, Zheng J, Fang VJ, Chang Z, Ni MY, Zhang Q, Ip DK, Yu J, Li Y, Wang L, Tu W, Meng L, Wu J T, Luo H, Li Q, Shu Y, Li Z, Feng Z, Yang W, Wang Y, Leung GM*, and Yu H*. Comparative epidemiology of human infections with avian influenza A H7N9 and H5N1 viruses in China: a population-based study of laboratory-confirmed cases. Lancet. 2013; 382 (9887): 129-37. (ESI highly cited paper)
33. Yu H, Alonso WJ, Feng L, Tan Y, Shu Y, Yang W*, and Viboud C*. Characterization of Regional Influenza Seasonality Patterns in China and Implications for Vaccination Strategies: Spatio-Temporal Modelling of Surveillance Data. PLoS Med. 2013; 10 (11): e1001552.
34. Yu H†, Cowling BJ†, Feng L†, Lau EH†, Liao Q, Tsang TK, Peng Z, Wu P, Liu F, Fang VJ, Zhang H, Li M, Zeng L, Xu Z, Li Z, Luo H, Li Q, Feng Z, Cao B, Yang W, Wu JT*, Wang Y*, and Leung GM. Human infection with avian influenza A H7N9 virus: an assessment of clinical severity. Lancet. 2013; 382 (9887): 138-45.
35. Yu H*, Liao Q, Yuan Y, Zhou L, Xiang N, Huai Y, Guo X, Zheng Y, van Doorn HR, Farrar J, Gao Z, Feng Z, Wang Y, and Yang W*. Effectiveness of oseltamivir on disease progression and viral RNA shedding in patients with mild pandemic 2009 influenza A H1N1: opportunistic retrospective study of medical charts in China. BMJ. 2010; 341: c4779.
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