样式: 排序: IF: - GO 导出 标记为已读
-
Preventing inappropriate signals pre- and post-ligand perception by a toggle switch mechanism of ERECTA Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Liangliang Chen, Michal Maes, Alicia M. Cochran, Julian R. Avila, Paul Derbyshire, Jan Sklenar, Kelsey M. Haas, Judit Villén, Frank L.H. Menke, Keiko U. Torii
Dynamic control of signaling events requires swift regulation of receptors at an active state. By focusing on the Arabidopsis ERECTA (ER) receptor kinase, which perceives peptide ligands to control multiple developmental processes, we report a mechanism preventing inappropriate receptor activity. The ER C-terminal tail (ER_CT) functions as an autoinhibitory domain: Its removal confers higher kinase
-
Intercellular mRNA transfer alters the human pluripotent stem cell state Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Yosuke Yoneyama, Ran-Ran Zhang, Mari Maezawa, Hideki Masaki, Masaki Kimura, Yuqi Cai, Mike Adam, Sreeja Parameswaran, Naoaki Mizuno, Joydeep Bhadury, So Maezawa, Hiroshi Ochiai, Hiromitsu Nakauchi, S. Steven Potter, Matthew T. Weirauch, Takanori Takebe
Intercellular transmission of messenger RNA (mRNA) is being explored in mammalian species using immortal cell lines. Here, we uncover an intercellular mRNA transfer phenomenon that allows for the adaptation and reprogramming of human primed pluripotent stem cells (hPSCs). This process is induced by the direct cell contact-mediated coculture with mouse embryonic stem cells under the condition impermissible
-
Layer-specific control of inhibition by NDNF interneurons Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Laura Bella Naumann, Loreen Hertäg, Jennifer Müller, Johannes J. Letzkus, Henning Sprekeler
Neuronal processing of external sensory input is shaped by internally generated top–down information. In the neocortex, top–down projections primarily target layer 1, which contains NDNF (neuron-derived neurotrophic factor)-expressing interneurons and the dendrites of pyramidal cells. Here, we investigate the hypothesis that NDNF interneurons shape cortical computations in an unconventional, layer-specific
-
A periplasmic protein modulates the proteolysis of peptidoglycan hydrolases to maintain cell wall homeostasis in Escherichia coli Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Sohee Park, Wook-Jong Jeon, Yeseul Lee, Chae Lim Lim, Eunyeong Lee, Han Byeol Oh, Gyu Sung Lee, Oh Hyun Kwon, Bumhan Ryu, Yong-Joon Cho, Chung Sub Kim, Sung-il Yoon, Jeong Min Chung, Hongbaek Cho
Bacterial cell wall assembly and remodeling require activities of peptidoglycan (PG) hydrolases as well as PG synthases. In particular, the activity of DD-endopeptidases, which cleave the 4-3 peptide crosslinks in PG, is essential for PG expansion in gram-negative bacteria. Maintaining optimal levels of DD-endopeptidases is critical for expanding PG without compromising its integrity. In Escherichia
-
Targeting EPHB2/ABL1 restores antitumor immunity in preclinical models of ependymoma Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Jun Ren, Zohreh Amoozgar, Taylor P. Uccello, Pin-Ji Lei, Yuhui Zhao, William W. Ho, Peigen Huang, Alisha Kardian, Stephen C. Mack, Dan G. Duda, Lei Xu, Rakesh K. Jain
Ependymoma (EPN) is a common form of brain tumor in children, often resistant to available cytotoxic therapies. Molecular profiling studies have led to a better understanding of EPN subtypes and revealed a critical role of oncogenes ZFTA–RELA fusion and EPHB2 in supratentorial ependymoma (ST-EPN). However, the immune system’s role in tumor progression and response to therapy remains poorly understood
-
Retrospective SARS-CoV-2 human antibody development trajectories are largely sparse and permissive Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Monica B. Kirby, Brian M. Petersen, Jonathan G. Faris, Siobhan P. Kells, Kayla G. Sprenger, Timothy A. Whitehead
Immunological interventions, like vaccinations, are enabled by the predictive control of humoral responses to novel antigens. While the development trajectories for many broadly neutralizing antibodies (bnAbs) have been measured, it is less established how human subtype-specific antibodies develop from their precursors. In this work, we evaluated the retrospective development trajectories for eight
-
Itaconate mechanism of action and dissimilation in Mycobacterium tuberculosis Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Manisha Priya, Sonu Kumar Gupta, Anil Koundal, Srajan Kapoor, Snigdha Tiwari, Saqib Kidwai, Luiz Pedro Sorio de Carvalho, Krishan Gopal Thakur, Dinesh Mahajan, Deepak Sharma, Yashwant Kumar, Ramandeep Singh
Itaconate, an abundant metabolite produced by macrophages upon interferon-γ stimulation, possesses both antibacterial and immunomodulatory properties. Despite its crucial role in immunity and antimicrobial control, its mechanism of action and dissimilation are poorly understood. Here, we demonstrate that infection of mice with Mycobacterium tuberculosis increases itaconate levels in lung tissues. We
-
Multiorifice acoustic microrobot for boundary-free multimodal 3D swimming Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Nima Mahkam, Musab C. Ugurlu, Sandeep Kumar Kalva, Amirreza Aghakhani, Daniel Razansky, Metin Sitti
The emerging new generation of small-scaled acoustic microrobots is poised to expedite the adoption of microrobotics in biomedical research. Recent designs of these microrobots have enabled intricate bioinspired motions, paving the way for their real-world applications. We present a multiorifice design of air-filled spherical microrobots that convert acoustic wave energy to efficient propulsion through
-
Adaptive evolutionary trajectories in complexity: Transitions between unicellularity and facultative differentiated multicellularity Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Hanna Isaksson, Peter Lind, Eric Libby
Multicellularity spans a wide gamut in terms of complexity, from simple clonal clusters of cells to large-scale organisms composed of differentiated cells and tissues. While recent experiments have demonstrated that simple forms of multicellularity can readily evolve in response to different selective pressures, it is unknown if continued exposure to those same selective pressures will result in the
-
BCL6 coordinates muscle mass homeostasis with nutritional states Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 Hui J. Wang, Weiwei Fan, Sihao Liu, Kyeongkyu Kim, Ayami Matsushima, Satoshi Ogawa, Hyun Gyu Kang, Jonathan Zhu, Gabriela Estepa, Mingxiao He, Lillian Crossley, Christopher Liddle, Minseok S. Kim, Morgan L. Truitt, Ruth T. Yu, Annette R. Atkins, Michael Downes, Ronald M. Evans
Nutritional status is a determining factor for growth during development and homeostatic maintenance in adulthood. In the context of muscle, growth hormone (GH) coordinates growth with nutritional status; however, the detailed mechanisms remain to be fully elucidated. Here, we show that the transcriptional repressor B cell lymphoma 6 (BCL6) maintains muscle mass by sustaining GH action. Muscle-specific
-
Can science-based interventions tamp down polarization? Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-22 M Mitchell Waldrop
-
Dispersal of influenza virus populations within the respiratory tract shapes their evolutionary potential Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Lucas M. Ferreri, Brittany Seibert, C. Joaquin Caceres, Kayle Patatanian, Katie E. Holmes, L. Claire Gay, Flavio Cargnin Faccin, Matias Cardenas, Silvia Carnaccini, Nishit Shetty, Daniela Rajao, Katia Koelle, Linsey C. Marr, Daniel R. Perez, Anice C. Lowen
Viral infections are characterized by dispersal from an initial site to secondary locations within the host. How the resultant spatial heterogeneity shapes within-host genetic diversity and viral evolutionary pathways is poorly understood. Here, we show that virus dispersal within and between the nasal cavity and trachea maintains diversity and is therefore conducive to adaptive evolution, whereas
-
Evolution of complexity through regulatory variation at a single gene. Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Mafalda S Ferreira
-
Electrifying the brain capillary Ca2+ signal. Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Manuel F Navedo,Madeline Nieves-Cintron,L Fernando Santana
-
The importance of IP6 for ADAR RNA-editing enzymes and antiviral defense. Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Brenda L Bass,Supraja Ranganathan
-
Phase formation and phase stability for the homogenous and heterogeneous amorphous metals versus the crystalline phase Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Yidi Shen, Konrad Samwer, William L. Johnson, William A. Goddard, Qi An
From molecular dynamics (MD) simulations of melt-quenching and thermal aging procedures in pure Ag, Cu, Ag–Cu binary alloys, and Cu–Zr binary alloys, we have identified two distinct amorphous phases for a metastable undercooled liquid: the homogeneous L-phase with low shear rigidity and the heterogenous G-phase with much higher shear rigidity and a heterogeneity length scale Λ. Here, we examine two-phase
-
The evolution of signaling and monitoring in plant–fungal networks Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Thomas W. Scott, E. Toby Kiers, Stuart A. West
Experiments have shown that when one plant is attacked by a pathogen or herbivore, this can lead to other plants connected to the same mycorrhizal network up-regulating their defense mechanisms. It has been hypothesized that this represents signaling, with attacked plants producing a signal to warn other plants of impending harm. We examined the evolutionary plausibility of this and other hypotheses
-
Tree rings and Earth System Models unveil mid-Holocene alpine climate. Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Andrew G Bunn
-
Removal by the fittest in ocean dead zones. Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 J M Beman
-
Reply to Boomsma: The evidence that eusociality evolved from monogamous ancestors is inconclusive. Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Ella Rees-Baylis,Ido Pen,Jan J Kreider
-
Nanoscopic acoustic vibrational dynamics of a single virus captured by ultrafast spectroscopy Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Yaqing Zhang, Rihan Wu, Md Shahjahan, Canchai Yang, Dohun Pyeon, Elad Harel
The natural vibrational frequencies of biological particles such as viruses and bacteria encode critical information about their mechanical and biological states as they interact with their local environment and undergo structural evolution. However, detecting and tracking these vibrations within a biological context at the single particle level has remained elusive. In this study, we track the vibrational
-
Valuing the benefits of reducing firearm violence in the United States Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Philip J. Cook, Marc Jeuland, Jens Ludwig
Justifying a proposed government regulation intended to reduce firearm violence requires a conceptually sound estimate of the monetized value of that impact and how that value is distributed across the population. Some previous estimates do not serve as a valid basis for policy evaluation or are out of date. A nationally representative survey was conducted by the AP-NORC Center for Public Affairs Research
-
Cortical reorganization following dorsal spinal injuries in newborn monkeys reveals a critical period in the development of the somatosensory cortex Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Neeraj Jain, Hui-Xin Qi, Arun Raman, David Lyon, Jon H. Kaas
Lesions of the dorsal columns of the spinal cord in adult macaque monkeys lead to the loss of hand inputs and large-scale expansion of the face inputs in the hand region of the somatosensory cortex. Inputs from alternate spinal pathways do not reactivate the deafferented regions of area 3b. Here, we determined how transections of the dorsal columns done within a few days after birth affect the developing
-
Adenosine diphosphate stimulates VEGF-independent choroidal endothelial cell proliferation: A potential escape from anti-VEGF therapy Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Nilima Biswas, Tommaso Mori, Naresh Kumar Ragava Chetty Nagaraj, Hong Xin, Tanja Diemer, Pin Li, Yongxuan Su, Carlo Piermarocchi, Napoleone Ferrara
We hypothesized that a strategy employing tissue-specific endothelial cells (EC) might facilitate the identification of tissue- or organ-specific vascular functions of ubiquitous metabolites. An unbiased approach was employed to identify water-soluble small molecules with mitogenic activity on choroidal EC. We identified adenosine diphosphate (ADP) as a candidate, following biochemical purification
-
Abrupt transformation of west Greenland lakes following compound climate extremes associated with atmospheric rivers Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Jasmine E. Saros, Václava Hazuková, Robert M. Northington, Grayson P. Huston, Avery Lamb, Sean Birkel, Ryan Pereira, Guillaume Bourdin, Binbin Jiang, Suzanne McGowan
Arctic ecosystems are affected by accelerated warming as well as the intensification of the hydrologic cycle, yet understanding of the impacts of compound climate extremes (e.g., simultaneous extreme heat and rainfall) remains limited, despite their high potential to alter ecosystems. Here, we show that the aquatic ecosystems in historically arid west Greenland have undergone an ecological transformation
-
Advancing forecasting capabilities: A contrastive learning model for forecasting tropical cyclone rapid intensification Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Chong Wang, Nan Yang, Xiaofeng Li
Tropical cyclones (TCs), particularly those that rapidly intensify (RI), pose a significant threat due to the uncertainty in forecasting them. RI TC periods, which intensify by at least 13 m/s within 24 h, remain challenging to forecast accurately. Existing models achieve a probability of detection (POD) of 82.6% and a false alarm rate (FARate) of 27.2%. To address this, we developed a contrastive-based
-
Global urban greening and its implication for urban heat mitigation Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Guangdong Li, Yue Cao, Chuanglin Fang, Siao Sun, Wei Qi, Zhenbo Wang, Sanwei He, Zhiqi Yang
Urban vegetation provides essential ecosystem services and benefits to support biodiversity and human well-being in urban areas. However, the dynamic trends, driving factors, and their implications to urban heat mitigation at the global scale remain largely unclear. Here, we used a high-resolution enhanced vegetation index (EVI) dataset to examine the vegetation dynamics in 11,235 urban areas worldwide
-
Nav1.8, an analgesic target for nonpsychotomimetic phytocannabinoids Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Mohammad-Reza Ghovanloo, Sidharth Tyagi, Peng Zhao, Stephen G. Waxman
Pain impacts billions of people worldwide, but treatment options are limited and have a spectrum of adverse effects. The search for safe and nonaddictive pain treatments has led to a focus on key mediators of nociceptor excitability. Voltage-gated sodium (Nav) channels in the peripheral nervous system—Nav1.7, Nav1.8, and Nav1.9—play crucial roles in pain signaling. Among these, Nav1.8 has shown promise
-
Gesture counteracts gender stereotypes conveyed through subtle linguistic cues Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Yihan Qian, Susan Goldin-Meadow, Lin Bian
Despite increased attempts to express equality in speech, biases often leak out through subtle linguistic cues. For example, the subject–complement statement (SCS, “Girls are as good as boys at math”) is used to advocate for equality but often reinforces gender stereotypes (boys are the standard against which girls are judged). We ask whether stereotypes conveyed by SCS can be counteracted by gesture
-
Falling racial inequality and rising educational inequality in US prison admissions for drug, violent, and property crimes Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Christopher Muller, Alexander F. Roehrkasse
Using administrative and survey data, we show that there has been a sea change in the contours of American imprisonment. At the end of the twentieth century, inequality in the prison admission rates of Black and White Americans was comparable to inequality in the prison admission rates of people with and without a college education. However, educational inequality is now much greater than racial inequality
-
Identification of ARHGEF11 (PDZ-RhoGEF) as an in vivo regulator of synapses and cognition Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Kathryn J. Bjornson, Bailey A. Kermath, Michael E. Cahill
Given the influence of cognitive abilities on life outcomes, there is inherent value in identifying genes involved in controlling learning and memory. Further, cognitive dysfunction is a core feature of many neuropsychiatric disorders. Here, we use a combinatory in silico approach to identify human gene targets that will have an especially high likelihood of individually and directly impacting cognition
-
Maternal manipulation in the social Hymenoptera. Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Jacobus J Boomsma
-
Postdoc publications and citations link to academic retention and faculty success Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-21 Yueran Duan, Shahan Ali Memon, Bedoor AlShebli, Qing Guan, Petter Holme, Talal Rahwan
Postdoctoral training is a career stage often described as a demanding and anxiety-laden time when many promising PhDs see their academic dreams slip away due to circumstances beyond their control. We use a unique dataset of academic publishing and careers to chart the more or less successful postdoctoral paths. We build a measure of academic success on the citation patterns two to five years into
-
-
An evolutionarily conserved cation channel tunes the sensitivity of gustatory neurons to ephaptic inhibition in Drosophila Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-17 MinHyuk Lee, Seon Yeong Kim, Taeim Park, Sung-Eun Yoon, Young-Joon Kim, Kyeung Min Joo, Jae Young Kwon, Kyuhyung Kim, KyeongJin Kang
In ephaptic coupling, physically adjacent neurons influence one another’s activity via the electric fields they generate. To date, the molecular mechanisms that mediate and modulate ephaptic coupling’s effects remain poorly understood. Here, we show that the hyperpolarization-activated cyclic nucleotide–gated (HCN) channel lateralizes the potentially mutual ephaptic inhibition between Drosophila gustatory
-
The population dynamics of clustered consumer–resource spatial patterns: Insights from the demographics of a Turing mechanism Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-17 Zachary Hajian-Forooshani, Iris Saraeny Rivera-Salinas, Ivette Perfecto, John Vandermeer
In ecology, Alan Turing’s proposed activation–inhibition mechanism has been abstracted as corresponding to several ecological interaction types to explain pattern formation in ecosystems. Consumer–resource interactions have strong theoretical arguments linking them to both the Turing mechanism and pattern formation, but there is little empirical support to demonstrate these claims. Here, we connect
-
Plant BCL-DOMAIN HOMOLOG proteins play a conserved role in SWI/SNF complex stability Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-17 Joan Candela-Ferre, Jaime Pérez-Alemany, Borja Diego-Martin, Vijaya Pandey, James Wohlschlegel, Jorge Lozano-Juste, Javier Gallego-Bartolomé
The SWItch/Sucrose Non-Fermenting (SWI/SNF) complexes are evolutionarily conserved, ATP-dependent chromatin remodelers crucial for multiple nuclear functions in eukaryotes. Recently, plant BCL-DOMAIN HOMOLOG (BDH) proteins were identified as shared subunits of all plant SWI/SNF complexes, significantly impacting chromatin accessibility and various developmental processes in Arabidopsis. In this study
-
Action potential–independent spontaneous microdomain Ca 2+ transients–mediated continuous neurotransmission regulates hyperalgesia Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-17 Zhuoyu Zhang, Jingyu Yao, Jingxiao Huo, Ruolin Wang, Xueting Duan, Yang Chen, Huadong Xu, Changhe Wang, Zuying Chai, Rong Huang
Neurotransmitters and neuromodulators can be released via either action potential (AP)–evoked transient or AP-independent continuous neurotransmission. The elevated AP-evoked neurotransmission in the primary sensory neurons plays crucial roles in hyperalgesia. However, whether and how the AP-independent continuous neurotransmission contributes to hyperalgesia remains largely unknown. Here, we show
-
A solution to the pervasive problem of response bias in self-reports Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-17 Jess Grimmond, Scott D. Brown, Guy E. Hawkins
Self-reports are used ubiquitously to probe people’s thoughts, feelings, and behaviors and inform medical decisions, enterprise operations, and government policy and legislation. Despite their pervasive use, self-report measures such as Likert scales have a profound problem: Standard analytic approaches do not control for the confounding effects of idiosyncratic response biases. Here, we present a
-
Precision data-driven modeling of cortical dynamics reveals person-specific mechanisms underpinning brain electrophysiology Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-17 Matthew F. Singh, Todd S. Braver, Michael Cole, ShiNung Ching
Task-free brain activity affords unique insight into the functional structure of brain network dynamics and has been used to identify neural markers of individual differences. In this work, we present an algorithmic optimization framework that directly inverts and parameterizes brain-wide dynamical-systems models involving hundreds of interacting neural populations, from single-subject M/EEG time-series
-
Conformity to continuous and discrete ordered traits Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-17 Elisa Heinrich Mora, Kaleda K. Denton, Michael E. Palmer, Marcus W. Feldman
Models of conformity and anticonformity have typically focused on cultural traits with unordered variants, such as baby names, strategies (cooperate/defect), or the presence/absence of an innovation. There have been fewer studies of conformity to cultural traits with ordered variants, such as level of cooperation (low, medium, high) or proportion of time spent on a task (0% to 100%). In these studies
-
Stimulating the regenerative capacity of the human retina with proneural transcription factors in 3D cultures Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-17 Juliette Wohlschlegel, Faith Kierney, Kayla L. Arakelian, Guillaume Luxardi, Naran Suvarnpradip, Dawn Hoffer, Fred Rieke, Ala Moshiri, Thomas A. Reh
Retinal diseases often lead to degeneration of specific retinal cell types with currently limited therapeutic options to replace the lost neurons. Previous studies have reported that overexpression of ASCL1 or combinations of proneural factors in Müller glia (MG) induce regeneration of functional neurons in the adult mouse retina. Recently, we applied the same strategy in dissociated cultures of fetal
-
Nitrous oxide production via enzymatic nitroxyl from the nitrifying archaeon Nitrosopumilus maritimus Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-17 Robert W. Voland, Hongsen Wang, Héctor D. Abruña, Kyle M. Lancaster
Ammonia oxidizing archaea (AOA) are among the most abundant microorganisms on earth and are known to be a major source of nitrous oxide (N 2 O) emissions, although biochemical origins of this N 2 O remain unknown. Enzymological details of AOA nitrogen metabolism are broadly unavailable. We report the recombinant expression, purification, and characterization of a multicopper oxidase, Nmar_1354, from
-
How to address solar geoengineering's transparency problem. Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-16 Shuchi Talati,Holly Jean Buck,Ben Kravitz
-
-
-
-
-
-
-
Discrepancies between subjective and objective sleep assessments revealed by in-home electroencephalography during real-world sleep Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-16 Minori Masaki, Saki Tsumoto, Akihiro Tani, Morie Tominaga, Jaehoon Seol, Shigeru Chiba, Kazuya Miyanishi, Kei Nishida, Fusae Kawana, Takashi Amemiya, Tetsuro Hiei, Takashi Kanbayashi, Masashi Yanagisawa
Sleep insufficiency and sleep disorders pose serious health challenges. This study aimed to determine the potential discrepancy between subjective and objective sleep assessments, including the latter made by physicians, by analyzing a 421-participant dataset in Japan comprising multiple nights of in-home sleep electroencephalogram (EEG) data and questionnaire responses on sleep habits or subjective
-
Random noise promotes slow heterogeneous synaptic dynamics important for robust working memory computation Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-16 Nuttida Rungratsameetaweemana, Robert Kim, Thiparat Chotibut, Terrence J. Sejnowski
Recurrent neural networks (RNNs) based on model neurons that communicate via continuous signals have been widely used to study how cortical neural circuits perform cognitive tasks. Training such networks to perform tasks that require information maintenance over a brief period (i.e., working memory tasks) remains a challenge. Inspired by the robust information maintenance observed in higher cortical
-
Crucial role of the cGAS N terminus in mediating flowable and functional cGAS–DNA condensate formation via DNA interactions Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-16 Zhelin Jiang, Fan Shi, Juan Li, Rui Liu, Jinhua Zhou, Zhensheng Zhong, Chaowei Shi, Mingming Ma, ShengQi Xiang, Daxing Gao
The DNA-sensing protein cGAS plays a pivotal role in the innate immune response and pathogenesis of various diseases. DNA triggers liquid–liquid phase separation (LLPS) and enhances the enzymatic activity of cGAS. However, the regulatory mechanisms of the disordered N terminus remain unclear. Here, we showed that cGAS Nterm , the N-terminal intrinsic disordered region (IDR) of cGAS, modulates the material
-
Fungal evasion of Drosophila immunity involves blocking the cathepsin-mediated cleavage maturation of the danger-sensing protease Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-16 Guirong Tang, Shuangxiu Song, Junmei Shang, Yujuan Luo, Shiqin Li, Dongxiang Wei, Chengshu Wang
Entomopathogenic fungi play a critical role in regulating insect populations, and representative species from the Metarhizium and Beauveria genera have been developed as eco-friendly biocontrol agents for managing agricultural insect pests. Relative to the advances in understanding antifungal immune responses in Drosophila , knowledge of how fungi evade insect immune defenses remains limited. In this
-
Joseph G. Gall (1928-2024): A naturalist and scholar for the genomic era. Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-15 Allan C Spradling,Diane M Dwyer
-
A distributed subcortical circuit linked to instrumental information-seeking about threat Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-15 Hailey A. Trier, Nima Khalighinejad, Sorcha Hamilton, Caroline Harbison, Luke Priestley, Mark Laubach, Miriam Klein-Flügge, Jacqueline Scholl, Matthew F. S. Rushworth
Daily life for humans and other animals requires switching between periods of threat- and reward-oriented behavior. We investigated neural activity associated with spontaneous switching, in a naturalistic task, between foraging for rewards and seeking information about potential threats with 7T fMRI in healthy humans. Switching was driven by estimates of likelihood of threat and reward. Both tracking
-
A histochemical approach to activity-based copper sensing reveals cuproplasia-dependent vulnerabilities in cancer Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-15 Marco S. Messina, Laura Torrente, Aidan T. Pezacki, Hanna I. Humpel, Erin L. Li, Sophia G. Miller, Odette Verdejo-Torres, Teresita Padilla-Benavides, Donita C. Brady, David W. Killilea, Alison N. Killilea, Martina Ralle, Nathan P. Ward, Jun Ohata, Gina M. DeNicola, Christopher J. Chang
Copper is an essential nutrient for sustaining vital cellular processes spanning respiration, metabolism, and proliferation. However, loss of copper homeostasis, particularly misregulation of loosely bound copper ions which are defined as the labile copper pool, occurs in major diseases such as cancer, where tumor growth and metastasis have a heightened requirement for this metal. To help decipher
-
Spatially programmed alignment and actuation in printed liquid crystal elastomers Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-15 Rodrigo Telles, Arda Kotikian, Guillaume Freychet, Mikhail Zhernenkov, Patryk Wąsik, Benjamin M. Yavitt, Jorge-Luis Barrera, Caitlyn C. Cook, Ronald Pindak, Emily C. Davidson, Jennifer A. Lewis
Liquid crystal elastomers (LCEs) exhibit reversible shape morphing behavior when cycled above their nematic-to-isotropic transition temperature. During extrusion-based 3D printing, LCE inks are subjected to coupled shear and extensional flows that can be harnessed to spatially control the alignment of their nematic director along prescribed print paths. Here, we combine experiment and modeling to elucidate
-
Direct lysine dimethylation of IRF3 by the methyltransferase SMYD3 attenuates antiviral innate immunity Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-15 Zixuan Wang, Xiaoyun Chen, Chunchun Zhu, Sijia Fan, Jinhua Tang, Hongyan Deng, Xueyi Sun, Xing Liu, Wuhan Xiao
Interferon regulatory factor 3 (IRF3) is the key transcription factor in the type I IFN signaling pathway, whose activation is regulated by multiple posttranslational modifications. Here, we identify SMYD3, a lysine methyltransferase, as a negative regulator of IRF3. SMYD3 interacts with IRF3 and catalyzes the dimethylation of IRF3 at lysine 39. This modification reduces IRF3 phosphorylation, dimerization
-
Dual modes of DNA N 6 -methyladenine maintenance by distinct methyltransferase complexes Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-01-15 Yuanyuan Wang, Bei Nan, Fei Ye, Zhe Zhang, Wentao Yang, Bo Pan, Fan Wei, Lili Duan, Haicheng Li, Junhua Niu, Aili Ju, Yongqiang Liu, Dantong Wang, Wenxin Zhang, Yifan Liu, Shan Gao
Stable inheritance of DNA N 6 -methyladenine (6mA) is crucial for its biological functions in eukaryotes. Here, we identify two distinct methyltransferase (MTase) complexes, both sharing the catalytic subunit AMT1, but featuring AMT6 and AMT7 as their unique components, respectively. While the two complexes are jointly responsible for 6mA maintenance methylation, they exhibit distinct enzymology, DNA/chromatin