Abstract
Almost all currently available treatments for inflammatory bowel disease (IBD) act by inhibiting inflammation, often blocking specific inflammatory molecules. However, given the infectious and neoplastic disease burden associated with chronic immunosuppressive therapy, the goal of attaining mucosal healing without immunosuppression is attractive. The absence of treatments that directly promote mucosal healing and regeneration in IBD could be linked to the lack of understanding of the underlying pathways. The range of potential strategies to achieve mucosal healing is diverse. However, the targeting of regenerative mechanisms has not yet been achieved for IBD. Stem cells provide hope as a regenerative treatment and are used in limited clinical situations. Growth factors are available for the treatment of short bowel syndrome but have not yet been applied in IBD. The therapeutic application of organoid culture and stem cell therapy to generate new intestinal tissue could provide a novel mechanism to restore barrier function in IBD. Furthermore, blocking key effectors of barrier dysfunction (such as MLCK or damage-associated molecular pattern molecules) has shown promise in experimental IBD. Here, we review the diversity of molecular targets available to directly promote mucosal healing, experimental models to identify new potential pathways and some of the anticipated potential therapies for IBD.
Key points
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Inflammatory bowel disease (IBD) has emerged as a global disease with no available cure.
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Most drugs to treat IBD are immunosuppressive, leading to increased risk of infections and cancer.
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Inter-individual variation in response to drugs means a wider range of therapeutic strategies is needed.
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Promoting mucosal healing is a promising therapeutic strategy in IBD.
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Experimental models have been instrumental to identify novel mechanisms promoting mucosal healing.
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Drugs promoting regeneration have been identified, but the examination of tumorigenesis in this setting is urgently needed.
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References
Solberg, I. C. et al. Clinical course during the first 10 years of ulcerative colitis: results from a population-based inception cohort (IBSEN Study). Scand. J. Gastroenterol. 44, 431–440 (2009).
Solberg, I. C. et al. Clinical course in Crohn’s disease: results of a Norwegian population-based ten-year follow-up study. Clin. Gastroenterol. Hepatol. 5, 1430–1438 (2007).
Eberhardson, M. et al. Tumour necrosis factor inhibitors in Crohn’s disease and the effect on surgery rates. Colorectal Dis. https://doi.org/10.1111/codi.16021 (2021).
Atia, O. et al. Colectomy rates did not decrease in paediatric- and adult-onset ulcerative colitis during the biologics era: a nationwide study from the epi-IIRN. J. Crohns Colitis https://doi.org/10.1093/ecco-jcc/jjab210 (2021).
Bemelman, W. A. et al. ECCO-ESCP Consensus on Surgery for Crohn’s Disease. J. Crohns Colitis 12, 1–16 (2018).
Oresland, T. et al. European evidence based consensus on surgery for ulcerative colitis. J. Crohns Colitis 9, 4–25 (2015).
de Souza, H. S. P., Fiocchi, C. & Iliopoulos, D. The IBD interactome: an integrated view of aetiology, pathogenesis and therapy. Nat. Rev. Gastroenterol. Hepatol. 14, 739–749 (2017).
McGovern, D. P., Kugathasan, S. & Cho, J. H. Genetics of inflammatory bowel diseases. Gastroenterology 149, 1163–1176.e2 (2015).
Rieder, F. et al. Results of the 2nd scientific workshop of the ECCO (III): basic mechanisms of intestinal healing. J. Crohns Colitis 6, 373–385 (2012).
Kaur, A. & Goggolidou, P. Ulcerative colitis: understanding its cellular pathology could provide insights into novel therapies. J. Inflamm. 17, 15 (2020).
Torres, J. et al. ECCO guidelines on therapeutics in Crohn’s disease: medical treatment. J. Crohns Colitis 14, 4–22 (2020).
Raine, T. et al. ECCO guidelines on therapeutics in ulcerative colitis: medical treatment. J. Crohns Colitis 16, 2–17 (2021).
Dvorak, H. F. Tumors: wounds that do not heal. Similarities between tumor stroma generation and wound healing. N. Engl. J. Med. 315, 1650–1659 (1986).
Neurath, M. F. & Travis, S. P. Mucosal healing in inflammatory bowel diseases: a systematic review. Gut 61, 1619–1635 (2012).
Karin, M. & Clevers, H. Reparative inflammation takes charge of tissue regeneration. Nature 529, 307–315 (2016).
Florholmen, J. Mucosal healing in the era of biologic agents in treatment of inflammatory bowel disease. Scand. J. Gastroenterol. 50, 43–52 (2015).
Pineton de Chambrun, G., Blanc, P. & Peyrin-Biroulet, L. Current evidence supporting mucosal healing and deep remission as important treatment goals for inflammatory bowel disease. Expert Rev. Gastroenterol. Hepatol. 10, 915–927 (2016).
Mazzuoli, S. et al. Definition and evaluation of mucosal healing in clinical practice. Dig. Liver Dis. 45, 969–977 (2013).
Peyrin-Biroulet, L. et al. Selecting Therapeutic Targets in Inflammatory Bowel Disease (STRIDE): determining therapeutic goals for treat-to-target. Am. J. Gastroenterol. 110, 1324–1338 (2015).
Turner, D. et al. STRIDE-II: an update on the Selecting Therapeutic Targets in Inflammatory Bowel Disease (STRIDE) Initiative of the International Organization for the Study of IBD (IOIBD): determining therapeutic goals for treat-to-target strategies in IBD. Gastroenterology 160, 1570–1583 (2021).
Novak, G. et al. Histologic scoring indices for evaluation of disease activity in Crohn’s disease. Cochrane Database Syst. Rev. 7, CD012351 (2017).
Mosli, M. H. et al. Histologic scoring indices for evaluation of disease activity in ulcerative colitis. Cochrane Database Syst. Rev. 5, CD011256 (2017).
Park, S., Abdi, T., Gentry, M. & Laine, L. Histological disease activity as a predictor of clinical relapse among patients with ulcerative colitis: systematic review and meta-analysis. Am. J. Gastroenterol. 111, 1692–1701 (2016).
Fernandes, S. R. et al. Transmural healing is associated with improved long-term outcomes of patients with Crohn’s disease. Inflamm. Bowel Dis. 23, 1403–1409 (2017).
Colombel, J. F., D’Haens, G., Lee, W. J., Petersson, J. & Panaccione, R. Outcomes and strategies to support a treat-to-target approach in inflammatory bowel disease: a systematic review. J. Crohns Colitis 14, 254–266 (2020).
Froslie, K. F., Jahnsen, J., Moum, B. A., Vatn, M. H. & IBSEN Group. Mucosal healing in inflammatory bowel disease: results from a Norwegian population-based cohort. Gastroenterology 133, 412–422 (2007).
Baert, F. et al. Mucosal healing predicts sustained clinical remission in patients with early-stage Crohn’s disease. Gastroenterology 138, 463–468 (2010).
Shah, S. C., Colombel, J. F., Sands, B. E. & Narula, N. Systematic review with meta-analysis: mucosal healing is associated with improved long-term outcomes in Crohn’s disease. Aliment. Pharmacol. Ther. 43, 317–333 (2016).
Ben-Horin, S. et al. Assessment of small bowel mucosal healing by video capsule endoscopy for the prediction of short-term and long-term risk of Crohn’s disease flare: a prospective cohort study. Lancet Gastroenterol. Hepatol. 4, 519–528 (2019).
Johnson, C. M. & Dassopoulos, T. Update on the use of thiopurines and methotrexate in inflammatory bowel disease. Curr. Gastroenterol. Rep. 20, 53 (2018).
Stallmach, A., Hagel, S. & Bruns, T. Adverse effects of biologics used for treating IBD. Best. Pract. Res. Clin. Gastroenterol. 24, 167–182 (2010).
Dahmus, J., Rosario, M. & Clarke, K. Risk of lymphoma associated with anti-TNF therapy in patients with inflammatory bowel disease: implications for therapy. Clin. Exp. Gastroenterol. 13, 339–350 (2020).
Scharl, S. et al. Malignancies in inflammatory bowel disease: frequency, incidence and risk factors-results from the Swiss IBD Cohort Study. Am. J. Gastroenterol. 114, 116–126 (2019).
Singh, S., Facciorusso, A., Dulai, P. S., Jairath, V. & Sandborn, W. J. Comparative risk of serious infections with biologic and/or immunosuppressive therapy in patients with inflammatory bowel diseases: a systematic review and meta-analysis. Clin. Gastroenterol. Hepatol. 18, 69–81.e3 (2020).
Oudhoff, M. J. et al. SETD7 controls intestinal regeneration and tumorigenesis by regulating Wnt/beta-Catenin and Hippo/YAP signaling. Dev. Cell 37, 47–57 (2016).
Huber, S. et al.IL-22BP is regulated by the inflammasome and modulates tumorigenesis in the intestine. Nature 491, 259–263 (2012).
Lindemans, C. A. et al. Interleukin-22 promotes intestinal-stem-cell-mediated epithelial regeneration. Nature 528, 560–564 (2015).
Atreya, R. & Neurath, M. F. Current and future targets for mucosal healing in inflammatory bowel disease. Visc. Med. 33, 82–88 (2017).
Irving, P. M., de Lusignan, S., Tang, D., Nijher, M. & Barrett, K. Risk of common infections in people with inflammatory bowel disease in primary care: a population-based cohort study. BMJ Open Gastroenterol. 8, e000573 (2021).
Kirchgesner, J. et al. Risk of serious and opportunistic infections associated with treatment of inflammatory bowel diseases. Gastroenterology 155, 337–346.e10 (2018).
Poullenot, F. et al. Risk of incident cancer in inflammatory bowel disease patients starting anti-TNF therapy while having recent malignancy. Inflamm. Bowel Dis. 22, 1362–1369 (2016).
Muller, M., D’Amico, F., Bonovas, S., Danese, S. & Peyrin-Biroulet, L. TNF inhibitors and risk of malignancy in patients with inflammatory bowel diseases: a systematic review. J. Crohns Colitis 15, 840–859 (2021).
Velayos, F. S., Terdiman, J. P. & Walsh, J. M. Effect of 5-aminosalicylate use on colorectal cancer and dysplasia risk: a systematic review and metaanalysis of observational studies. Am. J. Gastroenterol. 100, 1345–1353 (2005).
O’Connor, A., Packey, C. D., Akbari, M. & Moss, A. C. Mesalamine, but not sulfasalazine, reduces the risk of colorectal neoplasia in patients with inflammatory bowel disease: an agent-specific systematic review and meta-analysis. Inflamm. Bowel Dis. 21, 2562–2569 (2015).
Zhao, L. N. et al. 5-Aminosalicylates reduce the risk of colorectal neoplasia in patients with ulcerative colitis: an updated meta-analysis. PLoS ONE 9, e94208 (2014).
Nguyen, G. C., Gulamhusein, A. & Bernstein, C. N. 5-Aminosalicylic acid is not protective against colorectal cancer in inflammatory bowel disease: a meta-analysis of non-referral populations. Am. J. Gastroenterol. 107, 1298–1304 (2012).
Hooper, K. M., Barlow, P. G., Stevens, C. & Henderson, P. Inflammatory bowel disease drugs: a focus on autophagy. J. Crohns Colitis 11, 118–127 (2017).
Levin, A. D., Wildenberg, M. E. & van den Brink, G. R. Mechanism of action of anti-TNF therapy in inflammatory bowel disease. J. Crohns Colitis 10, 989–997 (2016).
Sigall-Boneh, R. et al. Research gaps in diet and nutrition in inflammatory bowel disease. a topical review by D-ECCO Working Group [Dietitians of ECCO]. J. Crohns Colitis 11, 1407–1419 (2017).
Lan, A. et al. Mucosal healing in inflammatory bowel diseases: is there a place for nutritional supplementation? Inflamm. Bowel Dis. 21, 198–207 (2015).
Fox, C. J., Hammerman, P. S. & Thompson, C. B. Fuel feeds function: energy metabolism and the T-cell response. Nat. Rev. Immunol. 5, 844–852 (2005).
Lee, J. M. & Lee, K. M. Endoscopic diagnosis and differentiation of inflammatory bowel disease. Clin. Endosc. 49, 370–375 (2016).
Atreya, R. & Siegmund, B. Location is important: differentiation between ileal and colonic Crohn’s disease. Nat. Rev. Gastroenterol. Hepatol. 18, 544–558 (2021).
Neurath, M. F. Targeting immune cell circuits and trafficking in inflammatory bowel disease. Nat. Immunol. 20, 970–979 (2019).
Odenwald, M. A. & Turner, J. R. The intestinal epithelial barrier: a therapeutic target? Nat. Rev. Gastroenterol. Hepatol. 14, 9–21 (2017).
Peterson, L. W. & Artis, D. Intestinal epithelial cells: regulators of barrier function and immune homeostasis. Nat. Rev. Immunol. 14, 141–153 (2014).
Allaire, J. M. et al. The intestinal epithelium: central coordinator of mucosal immunity. Trends Immunol. 39, 677–696 (2018).
Gehart, H. & Clevers, H. Tales from the crypt: new insights into intestinal stem cells. Nat. Rev. Gastroenterol. Hepatol. 16, 19–34 (2019).
Kaiko, G. E. et al. The colonic crypt protects stem cells from microbiota-derived metabolites. Cell 165, 1708–1720 (2016).
Haramis, A. P. et al. De novo crypt formation and juvenile polyposis on BMP inhibition in mouse intestine. Science 303, 1684–1686 (2004).
Sasaki, N. et al. Reg4+ deep crypt secretory cells function as epithelial niche for Lgr5+ stem cells in colon. Proc. Natl Acad. Sci. USA 113, E5399–E5407 (2016).
Gregorieff, A. et al. Expression pattern of Wnt signaling components in the adult intestine. Gastroenterology 129, 626–638 (2005).
Magro, F. et al. European consensus on the histopathology of inflammatory bowel disease. J. Crohns Colitis 7, 827–851 (2013).
Birchenough, G. M., Johansson, M. E., Gustafsson, J. K., Bergstrom, J. H. & Hansson, G. C. New developments in goblet cell mucus secretion and function. Mucosal Immunol. 8, 712–719 (2015).
Bevins, C. L. & Salzman, N. H. Paneth cells, antimicrobial peptides and maintenance of intestinal homeostasis. Nat. Rev. Microbiol. 9, 356–368 (2011).
Vaishnava, S. et al. The antibacterial lectin RegIIIgamma promotes the spatial segregation of microbiota and host in the intestine. Science 334, 255–258 (2011).
Zeissig, S. et al. Altered ENaC expression leads to impaired sodium absorption in the noninflamed intestine in Crohn’s disease. Gastroenterology 134, 1436–1447 (2008).
Vivinus-Nebot, M. et al. Functional bowel symptoms in quiescent inflammatory bowel diseases: role of epithelial barrier disruption and low-grade inflammation. Gut 63, 744–752 (2014).
Noren, E., Almer, S. & Soderman, J. Genetic variation and expression levels of tight junction genes identifies association between MAGI3 and inflammatory bowel disease. BMC Gastroenterol. 17, 68 (2017).
Clevers, H. The intestinal crypt, a prototype stem cell compartment. Cell 154, 274–284 (2013).
Boirivant, M. et al. A transient breach in the epithelial barrier leads to regulatory T-cell generation and resistance to experimental colitis. Gastroenterology 135, 1612–1623.e5 (2008).
Laukoetter, M. G. et al. JAM-A regulates permeability and inflammation in the intestine in vivo. J. Exp. Med. 204, 3067–3076 (2007).
Weber, C. R., Nalle, S. C., Tretiakova, M., Rubin, D. T. & Turner, J. R. Claudin-1 and claudin-2 expression is elevated in inflammatory bowel disease and may contribute to early neoplastic transformation. Lab. Invest. 88, 1110–1120 (2008).
Ahmad, R. et al. Targeted colonic claudin-2 expression renders resistance to epithelial injury, induces immune suppression, and protects from colitis. Mucosal Immunol. 7, 1340–1353 (2014).
Ding, L. et al. Inflammation and disruption of the mucosal architecture in claudin-7-deficient mice. Gastroenterology 142, 305–315 (2012).
Graham, W. V. et al. Intracellular MLCK1 diversion reverses barrier loss to restore mucosal homeostasis. Nat. Med. 25, 690–700 (2019).
Lopez-Posadas, R. et al. Rho-A prenylation and signaling link epithelial homeostasis to intestinal inflammation. J. Clin. Invest. 126, 611–626 (2016).
McGovern, D. P. et al. Genome-wide association identifies multiple ulcerative colitis susceptibility loci. Nat. Genet. 42, 332–337 (2010).
McGovern, D. P. et al. MAGI2 genetic variation and inflammatory bowel disease. Inflamm. Bowel Dis. 15, 75–83 (2009).
Vancamelbeke, M. et al. Genetic and transcriptomic bases of intestinal epithelial barrier dysfunction in inflammatory bowel disease. Inflamm. Bowel Dis. 23, 1718–1729 (2017).
Torres, J. et al. Serum biomarkers identify patients who will develop inflammatory bowel diseases up to 5 years before diagnosis. Gastroenterology 159, 96–104 (2020).
Gutzeit, C., Magri, G. & Cerutti, A. Intestinal IgA production and its role in host-microbe interaction. Immunol. Rev. 260, 76–85 (2014).
Neutra, M. R., Mantis, N. J. & Kraehenbuhl, J. P. Collaboration of epithelial cells with organized mucosal lymphoid tissues. Nat. Immunol. 2, 1004–1009 (2001).
Knoop, K. A., McDonald, K. G., McCrate, S., McDole, J. R. & Newberry, R. D. Microbial sensing by goblet cells controls immune surveillance of luminal antigens in the colon. Mucosal Immunol. 8, 198–210 (2015).
Mazzini, E., Massimiliano, L., Penna, G. & Rescigno, M. Oral tolerance can be established via gap junction transfer of fed antigens from CX3CR1+ macrophages to CD103+ dendritic cells. Immunity 40, 248–261 (2014).
Niess, J. H. et al. CX3CR1-mediated dendritic cell access to the intestinal lumen and bacterial clearance. Science 307, 254–258 (2005).
Rescigno, M. et al. Dendritic cells express tight junction proteins and penetrate gut epithelial monolayers to sample bacteria. Nat. Immunol. 2, 361–367 (2001).
Fournier, B. M. & Parkos, C. A. The role of neutrophils during intestinal inflammation. Mucosal Immunol. 5, 354–366 (2012).
Borregaard, N., Sorensen, O. E. & Theilgaard-Monch, K. Neutrophil granules: a library of innate immunity proteins. Trends Immunol. 28, 340–345 (2007).
Brinkmann, V. et al. Neutrophil extracellular traps kill bacteria. Science 303, 1532–1535 (2004).
Molloy, M. J. et al. Intraluminal containment of commensal outgrowth in the gut during infection-induced dysbiosis. Cell Host Microbe 14, 318–328 (2013).
Cheroutre, H., Lambolez, F. & Mucida, D. The light and dark sides of intestinal intraepithelial lymphocytes. Nat. Rev. Immunol. 11, 445–456 (2011).
Cherrier, D. E., Serafini, N., Di & Santo, J. P. Innate lymphoid cell development: a T cell perspective. Immunity 48, 1091–1103 (2018).
Meininger, I. et al. Tissue-specific features of innate lymphoid cells. Trends Immunol. 41, 902–917 (2020).
Colonna, M. Innate lymphoid cells: diversity, plasticity, and unique functions in immunity. Immunity 48, 1104–1117 (2018).
Sorini, C. & Villablanca, E. J. ILC damage, and I’ll repair it. Immunity 54, 1097–1099 (2021).
Sturm, A. & Dignass, A. U. Epithelial restitution and wound healing in inflammatory bowel disease. World J. Gastroenterol. 14, 348–353 (2008).
Dignass, A. U. & Podolsky, D. K. Cytokine modulation of intestinal epithelial cell restitution: central role of transforming growth factor beta. Gastroenterology 105, 1323–1332 (1993).
Dignass, A., Lynch-Devaney, K., Kindon, H., Thim, L. & Podolsky, D. K. Trefoil peptides promote epithelial migration through a transforming growth factor beta-independent pathway. J. Clin. Invest. 94, 376–383 (1994).
Moyer, R. A., Wendt, M. K., Johanesen, P. A., Turner, J. R. & Dwinell, M. B. Rho activation regulates CXCL12 chemokine stimulated actin rearrangement and restitution in model intestinal epithelia. Lab. Invest. 87, 807–817 (2007).
Vongsa, R. A., Zimmerman, N. P. & Dwinell, M. B. CCR6 regulation of the actin cytoskeleton orchestrates human beta defensin-2- and CCL20-mediated restitution of colonic epithelial cells. J. Biol. Chem. 284, 10034–10045 (2009).
Lickert, H. et al. Wnt/(beta)-catenin signaling regulates the expression of the homeobox gene Cdx1 in embryonic intestine. Development 127, 3805–3813 (2000).
Wang, L. C. et al. Disruption of hedgehog signaling reveals a novel role in intestinal morphogenesis and intestinal-specific lipid metabolism in mice. Gastroenterology 122, 469–482 (2002).
Wittkopf, N. et al. Activation of intestinal epithelial Stat3 orchestrates tissue defense during gastrointestinal infection. PLoS ONE 10, e0118401 (2015).
Pickert, G. et al. STAT3 links IL-22 signaling in intestinal epithelial cells to mucosal wound healing. J. Exp. Med. 206, 1465–1472 (2009).
Grivennikov, S. et al. IL-6 and Stat3 are required for survival of intestinal epithelial cells and development of colitis-associated cancer. Cancer Cell 15, 103–113 (2009).
Gilbert, S. et al. Enterocyte STAT5 promotes mucosal wound healing via suppression of myosin light chain kinase-mediated loss of barrier function and inflammation. EMBO Mol. Med. 4, 109–124 (2012).
Gilbert, S. et al. Activated STAT5 confers resistance to intestinal injury by increasing intestinal stem cell proliferation and regeneration. Stem Cell Rep. 4, 209–225 (2015).
US National Library of Medicine. ClinicalTrials.gov https://clinicaltrials.gov/ct2/show/NCT03558152 (2021).
US National Library of Medicine. ClinicalTrials.gov https://clinicaltrials.gov/ct2/show/NCT03650413 (2021).
Salas, A. et al. JAK-STAT pathway targeting for the treatment of inflammatory bowel disease. Nat. Rev. Gastroenterol. Hepatol. 17, 323–337 (2020).
Gerlach, K. et al. The JAK1/3 inhibitor tofacitinib suppresses T cell homing and activation in chronic intestinal inflammation. J. Crohns Colitis https://doi.org/10.1093/ecco-jcc/jjaa162 (2020).
Sandborn, W. J. et al. Tofacitinib as induction and maintenance therapy for ulcerative colitis. N. Engl. J. Med. 376, 1723–1736 (2017).
Panes, J. et al. Long-term safety and tolerability of oral tofacitinib in patients with Crohn’s disease: results from a phase 2, open-label, 48-week extension study. Aliment. Pharmacol. Ther. 49, 265–276 (2019).
Bain, C. C. & Mowat, A. M. Macrophages in intestinal homeostasis and inflammation. Immunol. Rev. 260, 102–117 (2014).
Parameswaran, N. & Patial, S. Tumor necrosis factor-alpha signaling in macrophages. Crit. Rev. Eukaryot. Gene Expr. 20, 87–103 (2010).
Na, Y. R., Stakenborg, M., Seok, S. H. & Matteoli, G. Macrophages in intestinal inflammation and resolution: a potential therapeutic target in IBD. Nat. Rev. Gastroenterol. Hepatol. 16, 531–543 (2019).
Yang, Z. et al. C-type lectin receptor LSECtin-mediated apoptotic cell clearance by macrophages directs intestinal repair in experimental colitis. Proc. Natl Acad. Sci. USA 115, 11054–11059 (2018).
Lorchner, H. et al. Myocardial healing requires Reg3beta-dependent accumulation of macrophages in the ischemic heart. Nat. Med. 21, 353–362 (2015).
Zigmond, E. et al. Macrophage-restricted interleukin-10 receptor deficiency, but not IL-10 deficiency, causes severe spontaneous colitis. Immunity 40, 720–733 (2014).
Shindo, R. et al. Regenerating islet-derived protein (Reg)3beta plays a crucial role in attenuation of ileitis and colitis in mice. Biochem. Biophys. Rep. 21, 100738 (2020).
Czarnewski, P. et al. Conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification. Nat. Commun. 10, 2892 (2019).
McCarthy, N., Kraiczy, J. & Shivdasani, R. A. Cellular and molecular architecture of the intestinal stem cell niche. Nat. Cell Biol. 22, 1033–1041 (2020).
Kinchen, J. et al. Structural remodeling of the human colonic mesenchyme in inflammatory bowel disease. Cell 175, 372–386.e17 (2018).
Martin, J. C. et al. Single-cell analysis of Crohn’s disease lesions identifies a pathogenic cellular module associated with resistance to anti-TNF therapy. Cell 178, 1493–1508.e20 (2019).
Ayyaz, A. et al. Single-cell transcriptomes of the regenerating intestine reveal a revival stem cell. Nature 569, 121–125 (2019).
Pull, S. L., Doherty, J. M., Mills, J. C., Gordon, J. I. & Stappenbeck, T. S. Activated macrophages are an adaptive element of the colonic epithelial progenitor niche necessary for regenerative responses to injury. Proc. Natl Acad. Sci. USA 102, 99–104 (2005).
Nishida, A. et al. Can control of gut microbiota be a future therapeutic option for inflammatory bowel disease? World J. Gastroenterol. 27, 3317–3326 (2021).
Manichanh, C., Borruel, N., Casellas, F. & Guarner, F. The gut microbiota in IBD. Nat. Rev. Gastroenterol. Hepatol. 9, 599–608 (2012).
Shan, Y., Lee, M. & Chang, E. B. The gut microbiome and inflammatory bowel diseases. Annu. Rev. Med. 73, 455–468 (2022).
Tkach, S. et al. Current status and future therapeutic options for fecal microbiota transplantation. Medicina 58, 84 (2022).
Abraham, B. & Quigley, E. M. M. Antibiotics and probiotics in inflammatory bowel disease: when to use them? Frontline Gastroenterol. 11, 62–69 (2020).
Alam, A. et al. Redox signaling regulates commensal-mediated mucosal homeostasis and restitution and requires formyl peptide receptor 1. Mucosal Immunol. 7, 645–655 (2014).
Kinnebrew, M. A. et al. Interleukin 23 production by intestinal CD103+CD11b+ dendritic cells in response to bacterial flagellin enhances mucosal innate immune defense. Immunity 36, 276–287 (2012).
Liu, H. et al. TLR5 mediates CD172α+ intestinal lamina propria dendritic cell induction of Th17 cells. Sci. Rep. 6, 22040 (2016).
Dieckgraefe, B. K. et al. Expression of the regenerating gene family in inflammatory bowel disease mucosa: Reg Ialpha upregulation, processing, and antiapoptotic activity. J. Investig. Med. 50, 421–434 (2002).
Qiu, J. et al. The aryl hydrocarbon receptor regulates gut immunity through modulation of innate lymphoid cells. Immunity 36, 92–104 (2012).
Parada Venegas, D. et al. Short chain fatty acids (SCFAs)-mediated gut epithelial and immune regulation and its relevance for inflammatory bowel diseases. Front. Immunol. 10, 277 (2019).
Machiels, K. et al. A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis. Gut 63, 1275–1283 (2014).
Jain, U. et al. Temporal regulation of the bacterial metabolite deoxycholate during colonic repair is critical for crypt regeneration. Cell Host Microbe 24, 353–363.e5 (2018).
Okada, T. et al. Microbiota-derived lactate accelerates colon epithelial cell turnover in starvation-refed mice. Nat. Commun. 4, 1654 (2013).
Rodriguez-Colman, M. J. et al. Interplay between metabolic identities in the intestinal crypt supports stem cell function. Nature 543, 424–427 (2017).
Yu, T. et al. Exclusive enteral nutrition protects against inflammatory bowel disease by inhibiting NFkappaB activation through regulation of the p38/MSK1 pathway. Int. J. Mol. Med. 42, 1305–1316 (2018).
Alhagamhmad, M. H., Day, A. S., Lemberg, D. A. & Leach, S. T. Exploring and enhancing the anti-inflammatory properties of polymeric formula. J. Parenter. Enter. Nutr. 41, 436–445 (2017).
Rolandsdotter, H., Jonsson-Videsater, K., Finkel, U. L. F., Eberhardson, Y. & Exclusive, M. Enteral nutrition: clinical effects and changes in mucosal cytokine profile in pediatric new inflammatory bowel disease. Nutrients 11, 414 (2019).
Pigneur, B. et al. Mucosal healing and bacterial composition in response to enteral nutrition vs steroid-based induction therapy-a randomised prospective clinical trial in children with Crohn’s disease. J. Crohns Colitis 13, 846–855 (2019).
MacLellan, A. et al. The impact of exclusive enteral nutrition (EEN) on the gut microbiome in Crohn’s disease: a review. Nutrients 9, 5 (2017).
Quince, C. et al. Extensive modulation of the fecal metagenome in children with Crohn’s disease during exclusive enteral nutrition. Am. J. Gastroenterol. 110, 1718–1729 (2015).
Alghamdi, A. et al. Untargeted metabolomics of extracts from faecal samples demonstrates distinct differences between paediatric Crohn’s disease patients and healthy controls but no significant changes resulting from exclusive enteral nutrition treatment. Metabolites 8, 82 (2018).
Diederen, K. et al. Exclusive enteral nutrition mediates gut microbial and metabolic changes that are associated with remission in children with Crohn’s disease. Sci. Rep. 10, 18879 (2020).
Lambert, B., Lemberg, D. A., Leach, S. T. & Day, A. S. Longer-term outcomes of nutritional management of Crohn’s disease in children. Dig. Dis. Sci. 57, 2171–2177 (2012).
Lightner, A. L. et al. Matrix-delivered autologous mesenchymal stem cell therapy for refractory rectovaginal Crohn’s fistulas. Inflamm. Bowel Dis. 26, 670–677 (2019).
Barnhoorn, M. C. et al. Long-term evaluation of allogeneic bone marrow-derived mesenchymal stromal cell therapy for Crohn’s disease perianal fistulas. J. Crohns Colitis 14, 64–70 (2019).
Ciccocioppo, R. et al. Long-term follow-up of crohn disease fistulas after local injections of bone marrow-derived mesenchymal stem cells. Mayo Clin. Proc. 90, 747–755 (2015).
Molendijk, I. et al. Allogeneic bone marrow-derived mesenchymal stromal cells promote healing of refractory perianal fistulas in patients with crohn’s disease. Gastroenterology 149, 918–27.e6 (2015).
Panes, J. et al. Expanded allogeneic adipose-derived mesenchymal stem cells (Cx601) for complex perianal fistulas in Crohn’s disease: a phase 3 randomised, double-blind controlled trial. Lancet 388, 1281–1290 (2016).
Duijvestein, M. et al. Autologous bone marrow-derived mesenchymal stromal cell treatment for refractory luminal Crohn’s disease: results of a phase I study. Gut 59, 1662–1669 (2010).
Mayer, L. et al. Safety and tolerability of human placenta-derived cells (PDA001) in treatment-resistant Crohn’s disease: a phase 1 study. Inflamm. Bowel Dis. 19, 754–760 (2013).
Forbes, G. M. et al. A phase 2 study of allogeneic mesenchymal stromal cells for luminal Crohn’s disease refractory to biologic therapy. Clin. Gastroenterol. Assoc. 12, 64–71 (2014).
Melmed, G. Y. et al. Human placenta-derived cells (PDA-001) for the treatment of moderate-to-severe Crohn’s disease: a phase 1b/2a study. Inflamm. Bowel Dis. 21, 1809–1816 (2015).
Ouboter, L. et al. Endoscopically injected allogeneic mesenchymal stromal cells alter the mucosal immune cell compartment in patients with ulcerative proctitis. J. Crohns Colitis 15, S098–S099 (2021).
Ouboter, L. et al. Locally injected allogeneic bone marrow-derived mesenchymal stromal cells for the treatment of refractory proctitis: clinical results of a phase IIa trial. J. Crohns Colitis 15, S381 (2021).
Niu, J., Yue, W., Le-Le, Z., Bin, L. & Hu, X. Mesenchymal stem cells inhibit T cell activation by releasing TGF-beta1 from TGF-beta1/GARP complex. Oncotarget 8, 99784–99800 (2017).
Engela, A. U. et al. Human adipose-tissue derived mesenchymal stem cells induce functional de-novo regulatory T cells with methylated FOXP3 gene DNA. Clin. Exp. Immunol. 173, 343–354 (2013).
Markovic, B. S. et al. Molecular and cellular mechanisms involved in mesenchymal stem cell-based therapy of inflammatory bowel diseases. Stem Cell Rev. Rep. 14, 153–165 (2018).
da Costa Goncalves, F. & Paz, A. H. Cell membrane and bioactive factors derived from mesenchymal stromal cells: Cell-free based therapy for inflammatory bowel diseases. World J. Stem Cell 11, 618–633 (2019).
Lopez-Santalla, M. & Garin, M. I. Improving the efficacy of mesenchymal stem/stromal-based therapy for treatment of inflammatory bowel diseases. Biomedicines 9, 1507 (2021).
Fujii, M. et al. Human intestinal organoids maintain self-renewal capacity and cellular diversity in niche-inspired culture condition. Cell Stem Cell 23, 787–793.e6 (2018).
Sato, T. & Clevers, H. Growing self-organizing mini-guts from a single intestinal stem cell: mechanism and applications. Science 340, 1190–1194 (2013).
Okamoto, R. & Watanabe, M. Role of epithelial cells in the pathogenesis and treatment of inflammatory bowel disease. J. Gastroenterol. 51, 11–21 (2016).
Yui, S. et al. Functional engraftment of colon epithelium expanded in vitro from a single adult Lgr5+ stem cell. Nat. Med. 18, 618–623 (2012).
Fukuda, M. et al. Small intestinal stem cell identity is maintained with functional Paneth cells in heterotopically grafted epithelium onto the colon. Genes Dev. 28, 1752–1757 (2014).
Fordham, R. P. et al. Transplantation of expanded fetal intestinal progenitors contributes to colon regeneration after injury. Cell Stem Cell 13, 734–744 (2013).
Kim, E. S. & Keam, S. J. Teduglutide: a review in short bowel syndrome. Drugs 77, 345–352 (2017).
Drucker, D. J., Erlich, P., Asa, S. L. & Brubaker, P. L. Induction of intestinal epithelial proliferation by glucagon-like peptide 2. Proc. Natl Acad. Sci. USA 93, 7911–7916 (1996).
Guan, X. et al. GLP-2-mediated up-regulation of intestinal blood flow and glucose uptake is nitric oxide-dependent in TPN-fed piglets 1. Gastroenterology 125, 136–147 (2003).
Tsai, C. H., Hill, M., Asa, S. L., Brubaker, P. L. & Drucker, D. J. Intestinal growth-promoting properties of glucagon-like peptide-2 in mice. Am. J. Physiol. 273, E77–E84 (1997).
Shin, E. D., Estall, J. L., Izzo, A., Drucker, D. J. & Brubaker, P. L. Mucosal adaptation to enteral nutrients is dependent on the physiologic actions of glucagon-like peptide-2 in mice. Gastroenterology 128, 1340–1353 (2005).
Litvak, D. A., Hellmich, M. R., Evers, B. M., Banker, N. A. & Townsend, C. M. Jr. Glucagon-like peptide 2 is a potent growth factor for small intestine and colon. J. Gastrointest. Surg. 2, 146–150 (1998).
Kouris, G. J. et al. The effect of glucagon-like peptide 2 on intestinal permeability and bacterial translocation in acute necrotizing pancreatitis. Am. J. Surg. 181, 571–575 (2001).
Benjamin, M. A., McKay, D. M., Yang, P. C., Cameron, H. & Perdue, M. H. Glucagon-like peptide-2 enhances intestinal epithelial barrier function of both transcellular and paracellular pathways in the mouse. Gut 47, 112–119 (2000).
Hsieh, J. et al. Glucagon-like peptide-2 increases intestinal lipid absorption and chylomicron production via CD36. Gastroenterology 137, 997–1005.e1-4 (2009).
Anbazhagan, A. N. et al. GLP-1 nanomedicine alleviates gut inflammation. Nanomedicine 13, 659–665 (2017).
Gu, J. et al. The protective and anti-inflammatory effects of a modified glucagon-like peptide-2 dimer in inflammatory bowel disease. Biochem. Pharmacol. 155, 425–433 (2018).
Drucker, D. J., Yusta, B., Boushey, R. P., DeForest, L. & Brubaker, P. L. Human [Gly2]GLP-2 reduces the severity of colonic injury in a murine model of experimental colitis. Am. J. Physiol. 276, G79–G91 (1999).
L’Heureux, M. C. & Brubaker, P. L. Glucagon-like peptide-2 and common therapeutics in a murine model of ulcerative colitis. J. Pharmacol. Exp. Ther. 306, 347–354 (2003).
Sigalet, D. L. et al. Enteric neural pathways mediate the anti-inflammatory actions of glucagon-like peptide 2. Am. J. Physiol. Gastrointest. Liver Physiol. 293, G211–G221 (2007).
Yang, P. Y. et al. Stapled, long-acting glucagon-like peptide 2 analog with efficacy in dextran sodium sulfate induced mouse colitis models. J. Med. Chem. 61, 3218–3223 (2018).
Qi, K. K., Lv, J. J., Wu, J. & Xu, Z. W. Therapeutic effects of different doses of polyethylene glycosylated porcine glucagon-like peptide-2 on ulcerative colitis in male rats. BMC Gastroenterol. 17, 34 (2017).
Salaga, M. et al. New peptide inhibitor of dipeptidyl peptidase IV, EMDB-1 extends the half-life of GLP-2 and attenuates colitis in mice after topical administration. J. Pharmacol. Exp. Ther. 363, 92–103 (2017).
Salaga, M. et al. Novel peptide inhibitor of dipeptidyl peptidase IV (Tyr-Pro-D-Ala-NH2) with anti-inflammatory activity in the mouse models of colitis. Peptides 108, 34–45 (2018).
Ban, H. et al. The DPP-IV inhibitor ER-319711 has a proliferative effect on the colonic epithelium and a minimal effect in the amelioration of colitis. Oncol. Rep. 25, 1699–1703 (2011).
Alavi, K., Schwartz, M. Z., Palazzo, J. P. & Prasad, R. Treatment of inflammatory bowel disease in a rodent model with the intestinal growth factor glucagon-like peptide-2. J. Pediatr. Surg. 35, 847–851 (2000).
Arthur, G. L., Schwartz, M. Z., Kuenzler, K. A. & Birbe, R. Glucagonlike peptide-2 analogue: a possible new approach in the management of inflammatory bowel disease. J. Pediatr. Surg. 39, 448–452 (2004).
Arda-Pirincci, P. & Bolkent, S. The role of glucagon-like peptide-2 on apoptosis, cell proliferation, and oxidant-antioxidant system at a mouse model of intestinal injury induced by tumor necrosis factor-alpha/actinomycin D. Mol. Cell Biochem. 350, 13–27 (2011).
Ivory, C. P., Wallace, L. E., McCafferty, D. M. & Sigalet, D. L. Interleukin-10-independent anti-inflammatory actions of glucagon-like peptide 2. Am. J. Physiol. Gastrointest. Liver Physiol. 295, G1202–G1210 (2008).
Gu, J. et al. A DPP-IV-resistant glucagon-like peptide-2 dimer with enhanced activity against radiation-induced intestinal injury. J. Control. Rel. 260, 32–45 (2017).
Buchman, A. L., Katz, S., Fang, J. C., Bernstein, C. N., Abou-Assi, S. G. & Teduglutide Study Group. Teduglutide, a novel mucosally active analog of glucagon-like peptide-2 (GLP-2) for the treatment of moderate to severe Crohn’s disease. Inflamm. Bowel Dis. 16, 962–973 (2010).
Al Draiweesh, S., Ma, C., Gregor, J. C., Rahman, A. & Jairath, V. Teduglutide in patients with active Crohn’s disease and short bowel syndrome. Inflamm. Bowel Dis. 25, e109 (2019).
Kochar, B. et al. Safety and efficacy of teduglutide (Gattex) in patients with Crohn’s disease and need for parenteral support due to short bowel syndrome-associated intestinal failure. J. Clin. Gastroenterol. 51, 508–511 (2017).
George, A. T., Li, B. H. & Carroll, R. E. Off-label teduglutide therapy in non-intestinal failure patients with chronic malabsorption. Dig. Dis. Sci. 64, 1599–1603 (2019).
Slonim, A. E. et al. A preliminary study of growth hormone therapy for Crohn’s disease. N. Engl. J. Med. 342, 1633–1637 (2000).
Sinha, A., Nightingale, J., West, K. P., Berlanga-Acosta, J. & Playford, R. J. Epidermal growth factor enemas with oral mesalamine for mild-to-moderate left-sided ulcerative colitis or proctitis. N. Engl. J. Med. 349, 350–357 (2003).
Dejaco, C. et al. An open-label pilot study of granulocyte colony-stimulating factor for the treatment of severe endoscopic postoperative recurrence in Crohn’s disease. Digestion 68, 63–70 (2003).
Korzenik, J. R. & Dieckgraefe, B. K. An open-labelled study of granulocyte colony-stimulating factor in the treatment of active Crohn’s disease. Aliment. Pharmacol. Ther. 21, 391–400 (2005).
Dieckgraefe, B. K. & Korzenik, J. R. Treatment of active Crohn’s disease with recombinant human granulocyte-macrophage colony-stimulating factor. Lancet 360, 1478–1480 (2002).
Korzenik, J. R., Dieckgraefe, B. K., Valentine, J. F., Hausman, D. F. & Gilbert, M. J., Sargramostim in Crohn’s Disease Study Group. Sargramostim for active Crohn’s disease. N. Engl. J. Med. 352, 2193–2201 (2005).
Sandborn, W. J. et al. Repifermin (keratinocyte growth factor-2) for the treatment of active ulcerative colitis: a randomized, double-blind, placebo-controlled, dose-escalation trial. Aliment. Pharmacol. Ther. 17, 1355–1364 (2003).
Krishnan, K., Arnone, B. & Buchman, A. Intestinal growth factors: potential use in the treatment of inflammatory bowel disease and their role in mucosal healing. Inflamm. Bowel Dis. 17, 410–422 (2011).
Ihara, S., Hirata, Y. & Koike, K. TGF-beta in inflammatory bowel disease: a key regulator of immune cells, epithelium, and the intestinal microbiota. J. Gastroenterol. 52, 777–787 (2017).
Gao, Y. et al. Myosin light chain kinase as a multifunctional regulatory protein of smooth muscle contraction. IUBMB Life 51, 337–344 (2001).
Kuo, I. Y. & Ehrlich, B. E. Signaling in muscle contraction. Cold Spring Harb. Perspect. Biol. 7, a006023 (2015).
Chen, X., Pavlish, K. & Benoit, J. N. Myosin phosphorylation triggers actin polymerization in vascular smooth muscle. Am. J. Physiol. Heart Circ. Physiol. 295, H2172–H2177 (2008).
He, W. Q. et al. Myosin light chain kinase is central to smooth muscle contraction and required for gastrointestinal motility in mice. Gastroenterology 135, 610–620 (2008).
Shen, L. et al. Myosin light chain phosphorylation regulates barrier function by remodeling tight junction structure. J. Cell Sci. 119, 2095–2106 (2006).
Xiong, Y. et al. Myosin light chain kinase: a potential target for treatment of inflammatory diseases. Front. Pharmacol. 8, 292 (2017).
Blair, S. A., Kane, S. V., Clayburgh, D. R. & Turner, J. R. Epithelial myosin light chain kinase expression and activity are upregulated in inflammatory bowel disease. Lab. Invest. 86, 191–201 (2006).
Su, L. et al. TNFR2 activates MLCK-dependent tight junction dysregulation to cause apoptosis-mediated barrier loss and experimental colitis. Gastroenterology 145, 407–415 (2013).
Xiong, Y. et al. Restored impaired barrier function via downregulation of MLCK by microRNA-1 in rat colitis model. Front. Pharmacol. 7, 134 (2016).
Beard, R. S. Jr. et al. Non-muscle Mlck is required for beta-catenin- and FoxO1-dependent downregulation of Cldn5 in IL-1beta-mediated barrier dysfunction in brain endothelial cells. J. Cell Sci. 127, 1840–1853 (2014).
Hirakawa, M. et al. Low-dose IL-2 selectively activates subsets of CD4+ Tregs and NK cells. JCI Insight 1, e89278 (2016).
US National Library of Medicine. ClinicalTrials.gov https://clinicaltrials.gov/ct2/show/NCT04987307 (2022).
Donohue, J. H. & Rosenberg, S. A. The fate of interleukin-2 after in vivo administration. J. Immunol. 130, 2203–2208 (1983).
Ottolenghi, A. et al. Life-extended glycosylated IL-2 promotes Treg induction and suppression of autoimmunity. Sci. Rep. 11, 7676 (2021).
Tchao, N. & et al. Efavaleukin alfa, a novel il-2 mutein, selectively expands regulatory T cells in patients with SLE: interim results of a phase 1b multiple ascending dose study. Arthritis Rheumatol. 73 (Suppl. 10), ABSTRACT 1734 (2021).
Petrey, A. C. & de la Motte, C. A. The extracellular matrix in IBD: a dynamic mediator of inflammation. Curr. Opin. Gastroenterol. 33, 234–238 (2017).
Howard, A. M. et al. DSS-induced damage to basement membranes is repaired by matrix replacement and crosslinking. J. Cell Sci. 132, jcs226860 (2019).
Derkacz, A., Olczyk, P., Olczyk, K. & Komosinska-Vassev, K. The role of extracellular matrix components in inflammatory bowel diseases. J. Clin. Med. 10, 1122 (2021).
Bailey, J. R. et al. IL-13 promotes collagen accumulation in Crohn’s disease fibrosis by down-regulation of fibroblast MMP synthesis: a role for innate lymphoid cells? PLoS ONE 7, e52332 (2012).
Koelink, P. J. et al. Collagen degradation and neutrophilic infiltration: a vicious circle in inflammatory bowel disease. Gut 63, 578–587 (2014).
Bevivino, G., Sedda, S., Marafini, I. & Monteleone, G. Oligonucleotide-based therapies for inflammatory bowel disease. BioDrugs 32, 331–338 (2018).
Zorzi, F. et al. A phase 1 open-label trial shows that smad7 antisense oligonucleotide (GED0301) does not increase the risk of small bowel strictures in Crohn’s disease. Aliment. Pharmacol. Ther. 36, 850–857 (2012).
Sands, B. E. et al. Mongersen (GED-0301) for active Crohn’s disease: results of a phase 3 study. Am. J. Gastroenterol. 115, 738–745 (2020).
Izzo, R. et al. Knockdown of Smad7 with a specific antisense oligonucleotide attenuates colitis and colitis-driven colonic fibrosis in mice. Inflamm. Bowel Dis. 24, 1213–1224 (2018).
Acknowledgements
The authors thank members of the Villablanca lab for helpful comments. E.J.V. was supported by grants from the Swedish Research Council, VR grants K2015-68X-22765-01-6 and 2018-02533, Formas grant no. FR-2016/0005, Cancerfonden (19 0395 Pj), and the Wallenberg Academy Fellow program (2019.0315). K.S. has received support from The Swedish Medical Association (Svenska läkarsällskapet). C.R.H.H. gratefully acknowledges support from Julins Foundation, Bengt Ihre Fellowship, The Swedish Medical Association (Svenska Läkarsällskapet), the Calder Foundation, an ECCO project grant, Gastrofonden, MagTarm fund, Professor Nanna Svartz Fund and a clinical post-doc from Region Stockholm.
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E.J.V. has received research grants from F. Hoffmann-La Roche. C.R.H.H. has received speaker fees from Takeda, Ferring, AbbVie, and Janssen and consultancy fees from Pfizer. She has acted as local principal investigator for clinical trials for Janssen and GlaxoSmithKline. She has received project grants from Takeda and Tillotts. K.S. declares no competing interests.
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Villablanca, E.J., Selin, K. & Hedin, C.R.H. Mechanisms of mucosal healing: treating inflammatory bowel disease without immunosuppression?. Nat Rev Gastroenterol Hepatol 19, 493–507 (2022). https://doi.org/10.1038/s41575-022-00604-y
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DOI: https://doi.org/10.1038/s41575-022-00604-y
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