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Complete genome sequence of Codonopsis torradovirus A, a novel torradovirus infecting Codonopsis lanceolata in South Korea

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Abstract

We herein present the complete genome sequence of codonopsis torradovirus A (CoTVA), which was isolated from Codonopsis lanceolata (deodeok) in Gangwon-do, South Korea. The CoTVA genome contains two positive-sense RNA segments, namely RNA1 (6922 nucleotides), which encodes a predicted polyprotein, and RNA2 (4613 nucleotides), which encodes a movement protein and coat proteins (CPs). The proteinase-polymerase (Pro-Pol) and CP amino acid sequences were 75% and 54% identical, respectively, to those of motherwort yellow mosaic virus. Pairwise comparisons of the Pro-Pol and CP sequences revealed that the virus described in this study should be considered a member of a new torradovirus species. Phylogenetic analysis of the Pro-Pol sequence encoded by RNA1 and the CP region encoded by RNA2 indicated that CoTVA is a new member of the genus Torradovirus in the family Secoviridae. CoTVA is the first torradovirus detected in Codonopsis lanceolata.

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Acknowledgements

This work was supported by IPET (Korea Institute of Planning and Evaluation for Technology in Food, Agriculture, Forestry and Fisheries; Project No. AGC1762111), Ministry of Agriculture, Food and Rural Affairs, Republic of Korea.

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Authors and Affiliations

  1. Biosystem and Bioengineering program, University of Science and Technology (UST), Daejeon, 34141, Republic of Korea

    Mesele Tilahun Belete, Workitu Firomsa Gudeta & Jae Sun Moon

  2. Plant System Engineering Research Center, Korean Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea

    Mesele Tilahun Belete, Workitu Firomsa Gudeta, Se Eun Kim, Davaajargal Igori & Jae Sun Moon

  3. Department of Biology, School of Mathematics and Natural Sciences, Mongolian National University of Education, Ulaanbaatar, Mongolia

    Davaajargal Igori

  4. Amhara Agricultural Research Institute, Plant Biotechnology Research Division, Bahir Dar, Ethiopia

    Mesele Tilahun Belete

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  1. Mesele Tilahun Belete
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  2. Workitu Firomsa Gudeta
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  3. Se Eun Kim
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  4. Davaajargal Igori
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Correspondence to Davaajargal Igori or Jae Sun Moon.

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Belete, M.T., Gudeta, W.F., Kim, S.E. et al. Complete genome sequence of Codonopsis torradovirus A, a novel torradovirus infecting Codonopsis lanceolata in South Korea. Arch Virol 166, 3473–3476 (2021). https://doi.org/10.1007/s00705-021-05244-2

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  • DOI: https://doi.org/10.1007/s00705-021-05244-2

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