Data and code availability
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Single-cell RNA-seq data have been deposited at GEO and are publicly available as of the date of publication. The accession number is listed in the key resources table. This paper also analyzes existing, publicly available data. These accession numbers for the datasets are listed in the key resources table.
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The original code for EcoTyper is available as of the date of the publication for non-profit academic use. The DOI is listed in the key resources table. Updates to the code will be available at https://ecotyper.stanford.edu/lymphoma.
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Any additional information required to reanalyze the data reported in this paper is available from the lead contact upon request.