Abstract
Ratoon stunting disease (RSD) and brown rust are major plant diseases that disrupt sugarcane production. Identifying disease-resistant parental lines offers an efficient strategy for controlling these diseases in sugarcane. The aim of this study was to clarify the occurrence of RSD and the distribution of the major brown rust resistance gene Bru1 among commonly used sugarcane breeding parents in China. We used PCR assays for the molecular detection of RSD and Bru1 in 255 sugarcane breeding parents collected from the National Germplasm Repository of Sugarcane of China (2019–2020). RSD was detected in 68.6% of the parental lines, indicating that commonly used sugarcane breeding parents in China are severely infected by RSD. However, 80 of the tested lines were RSD negative, indicating these parental lines had good resistance to RSD. The RSD incidence rate varied between different parental line series: VMC had the lowest RSD frequency (40.0%) and Guitang had the highest frequency (84.6%), indicating that the VMC series had good resistance levels to RSD and that a high proportion of parental lines were RSD resistant. Bru1 was present in 87 of the 255 tested parental lines, with greatest frequency detected in the ROC series (71.4%) and lowest frequency detected in the CP series (21.6%). These results indicate that Bru1 is a major source of brown rust resistance in commonly used sugarcane breeding parents in China, with important implications for brown rust resistance breeding programs in sugarcane. Overall, these results provide a reference for selecting appropriate breeding lines that are resistant to RSD and brown rust, offering guidance for effective disease control in sugarcane.
Similar content being viewed by others
References
Asnaghi C, D’ Hont A, Glaszmann J, Rott P (2001) Resistance of sugarcane cultivar R570 to Puccinia melanocephala isolates from different geographic locations. Plant Dis 85(3):282–286
Asnaghi C, Roques D, Ruffel S, Kaye C, Hoarau JY, lismart HT, Girard JC, Raboin LM, Risterucci AM, Grivet L, D’Hont A (2004) Targeted mapping of a sugarcane rust resistance gene (Bru1) using bulked segregant analysis and AFLP markers. Theor Appl Genet 108:759–764
Chen QL (1982) Sugarcane diseases in the world. Agriculture Press, Beijing, pp 34–40
Comstook JC (1992) Effect of rust on sugarcane growth and biomass. Plant Dis 76(2):172–177
Comstook JC, Shine JM, Raid RN (1992) Effect of early rust infection on subsequent sugarcane growth. Sugar Cane 4:7–9
Costet L, Le Cunff L, Royaert S, Raboin LM, Hervouet C, Toubi L, Telismart H, Garsmeur O, Rousselle Y, Pauquet J, Nibouche S, Glaszmann JC, Hoarau JY, D’ Hont A (2012) Haplotype structure around Bru1 reveals a narrow genetic basis for brown rust resistance in modern sugarcane cultivars. Theor Appl Genet 125:825–836
Cunff LL, Garsmeur O, Raboin LM, Pauquet J, Telismart H, Selvi A, Grivet L, Philippe R, Begum D, Deu M, Costet L, Wing R, Glaszmann JC, D’Hont A (2008) Diploid/ polyploid syntenic shuttle mapping and haplotype–specific chromosome walking toward a rust resistance gene (Bru1) in highly polyploid sugarcane (2n approximately 12× approximately 115). Genetics 180:649–660
Daugrois JH, Grivet L, Roques D, Hoarau JY, Lombard H, Glaszmann JC, D’Hont A (1996) A putative major gene for rust resistance linked with a RFLP marker in sugarcane cultivar ‘R570’. Theor Appl Genet 92:1059–1064
Davis MJ, Gillaspie AG, Harris RW, Lawson RH (1980) Ratoon stunting disease of sugarcane: isolation of the causal bacterium. Science 210(4476):1365–1367
Gillaspie JAG, Teakle DS (1989) Ratoon stunting disease. In: Ricaud C, Egan BT, Gillaspie AG, Hughes CG (eds) Disease of sugarcane: major disease. Elsevier Science, New York, pp 59–80
Glynn NC, Laborde C, Davidson RW, Irey MS, Glaz B, D’ Hont A, Comstock JC (2013) Utilization of a major brown rust resistance gene in sugarcane breeding. Mol Breed 31:323–331
Grisham MP (1991) Effect on ratoon stunting disease on yield of sugarcane grown in multiple three-year plantings. Phytopathology 81(3):337–340
Hoy JW, Hollier CA (2009) Effect of brown rust on yield of sugarcane in Louisiana. Plant Dis 93(11):1171–1174
Hoy JW, Grisham MP, Damann KE (1999) Spread and increase of ratoon stunting disease of sugarcane and comparison of disease detection method. Plant Dis 83(12):1170–1175
Huang YK, Li WF, Zhang RY, Wang XY (2018) Color illustration of diagnosis and control for modern sugarcane diseases, pests, and weeds. Springer Nature Singapore Pte Ltd, Singapore
Hughes CG, Steindl DRL (1956) Some further developments in the study of ratoon stunting disease in Queensland. Proc Int Soc Sugar Cane Tech 9:1012–1022
Li WF, Wang XY, Huang YK, Lu WJ, Luo ZM (2010) Investigation of ratoon stunting disease (RSD) on sugarcane in Yunnan and evaluation of the pathogenic bacterium elimination in seed cane by hot-water treatment. Acta Phytopathol Sin 40(5):556–560
Li WF, Wang XY, Huang YK, Lu WJ, Luo ZM, Yin J (2011) A Survey and pathogen detection of sugarcane ratoon stunting disease in Gengma. Sugarcane Canesugar 6:22–25
Li WF, Wang XY, Huang YK, Zhang RY, Shan HL, Yin J, Luo ZM (2015) Identification of brown rust resistance and molecular detection of Bru1 gene in 31 sugarcane wild core germplasm resources. Acta Agron Sin 41:806–812
Li WF, Shan HL, Zhang RY, Pu HC, Wang XY, Cang XY, Yin J, Luo ZM, Huang YK (2018a) Identification of field resistance and molecular detection of the brown rust resistance gene Bru1 in new elite sugarcane varieties in China. Crop Prot 103:46–50
Li Z, Xu LP, Su YC, Wu QB, Cheng W, Sun TT, Gao SW (2018b) Analysis of brown rust resistance inheritance based on field phenotypes and detection of Bru1 gene in sugarcane. Acta Agron Sin 44(2):306–312
Liu XM, Liu WB, Shi HH (2008) Pathogen identification and biological characteristics of sugarcane rust in Danzhou. Sugar Crops China 2:30–32
Lu GD, Li CC, Pan CZ, Zhang XB (1997) List of sugarcane diseases in China. Sugarcane 4(4):19–23
McDougall WA, Steindl DRI, Elliott JT (1948) Variations in primary vigour in the variety Q28. Cane Growers’ Q Bull 12:31–34
Ma L (1995) The production and research actuality of sugarcane in Thailand. World Agric 9:23
Martin JP, Abbott EV, Hughes CG (1982) Sugarcane diseases of the world (Volume 1). Agriculture Press, Beijing, pp 299–319
Neuber AC, Santos FRC, Costa JB, Volpin M, Xavier MA, Perecin D, Burbano RCV, Landell MGA, Pinto LR (2017) Survey of the Bru1 gene for brown rust resistance in Brazilian local and basic sugarcane germplasm. Plant Breed 136:182–187
Pan YB, Grisbam MP, Buroer DM, Damann KEJ, Wei Q (1998) A polymerase chain reaction protocol for the detection of Clavibacter xyli subsp. xyli, the causal bacterium of sugarcane ratoon stunting disease. Plant Dis 82(3):285–290
Parco AS, Avellaneda MC, Hale A, Hoy JW, Kimben CA, Pontif MJ, Gravois KA, Baisakh N (2014) Frequency and distribution of the brown rust resistance gene Bru1 and implications for the Louisiana sugarcane breeding programme. Plant Breed 133:654–659
Purdy LH, Liu LJ, Dean JL (1983) Sugarcane rust: a newly important disease. Plant Dis 67(11):1292–1296
Que YX, Xu JS, Xu LP, Gao SJ, Chen RK (2008) PCR detection for Leifsonia xyli subsp. xyli, pathogen of the sugarcane ratoon stunting disease. Fujian J Agr Sci 23(4):364–367
Racedo J, Perera MF, Bertani R, Funes C, Gonzalez V, Cuenya MI, D’Hont A, Welin B, Castagnaro AP (2013) Bru1 gene and potential alternative sources of resistance to sugarcane brown rust disease. Euphytica 191:429–436
Raid RH (2006) Florida sugarcane handbook. University of Florida, Florida, pp 1–3
Rott PC, Girard J, Comstook JC (2013) Impact of pathogen genetics on breeding for resistance to sugarcane diseases. Int Soc Sugar Cane Tech Proc 28:1–11
Ruan XY, Yan F, Sun CJ (1983) Occurrence of Puccinia erianthi on sugarcane in Yunnan province. Acta Mycol Sin 2:260–261
Ryan CC, Egan BT (1989) Rust. In: Ricaud C, Egan BT, Gillaspie AG, Hughes CG (eds) Diseases of sugarcane. Academic Press, Amsterdam, pp 189–210
Shen WK, Zhen XW, Chen ZH, Liu PL, Deng HH (2007) Survey of sugarcane ratoon stunting disease in Zhanjiang. Chin Agr Sci Bull 23(4):387–391
Steindl DRS (1950) Ratoon stunting disease. Proc Int Soc Sugar Cane Tech 15:210–212
The Important Sugarcane Diseases Research Cooperation Group (1991) The preliminary report of sugarcane diseases investigation in the sugarcane planting provinces (partly), Mainland China. Sugarcane Canesugar 1:1–8
Wang XY, Li WF, Huang YK, Zhang RY, Shan HL, Luo ZM, Yin J (2015) The occurrence and damage of sugarcane ratoon stunting disease and its pathogen detection in Yunnan. Chin Agr Sci Bull 31(31):208–212
Wei JJ, Deng ZY, Huang WH, Pan XH, Wang BH, Liu XJ (2010) Control methods and pathogen biological characteristics of sugarcane rust in Beihai. J Anhui Agric Sci 38(27):14997–14999
Young AJ, Kawamata A, Ensbey MA, Lambley E, Nock CJ (2016) Efficient diagnosis of ratoon stunting disease of sugarcane by quantitative PCR on pooled leaf sheath biopsies. Plant Dis 100:2492–2498
Zhang Y, Fan YG, Mo ZH, Wu KC, Li M, Qin XM, Liang J (2012) Ratoon stunting disease resistance evaluation on sugarcane germplasm resources. J South Agric 43(12):1963–1967
Acknowledgements
The authors acknowledge the funding body, Sugar Crop Research System (CARS-170303), the Yunling Industry and Technology Leading Talent Training Program "Prevention and Control of Sugarcane Pests" (2018LJRC56), and the Yunnan Province Agriculture Research System (YNGZTX-4-92).
Funding
This work was supported by Sugar Crop Research System (CARS-170303), the Yunling Industry and Technology Leading Talent Training Program "Prevention and Control of Sugarcane Pests" (2018LJRC56), and the Yunnan Province Agriculture Research System (YNGZTX-4-92).
Author information
Authors and Affiliations
Contributions
YKH, JL, RYZ and WJL conceived and designed the experiments; JYL provided the samples; JL, RYZ, XYC, JYL, HLS, CMW, and XYW conducted the experiments; JL and RYZ analyzed the data; JL wrote the manuscript. All authors approved the final version of the manuscript.
Corresponding authors
Ethics declarations
Conflict of interest
The authors declare no conflict of interest.
Additional information
Publisher’s Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Rights and permissions
About this article
Cite this article
Li, J., Zhang, R., Cang, X. et al. Molecular determination of RSD and the Bru1 gene in commonly used sugarcane (Saccharum officinarum) breeding parents in China. Euphytica 217, 127 (2021). https://doi.org/10.1007/s10681-021-02847-3
Received:
Accepted:
Published:
DOI: https://doi.org/10.1007/s10681-021-02847-3