Elsevier

Fungal Biology

Volume 125, Issue 9, September 2021, Pages 718-724
Fungal Biology

Botryosphaeriaceae on Syzygium cordatum across a latitudinal gradient in South Africa

https://doi.org/10.1016/j.funbio.2021.04.006Get rights and content

Highlights

  • Fourteen Botryosphaeriaceae species were isolated from Syzygium cordatum (Waterberry).

  • Maximum historical temperature influenced community composition of Botryosphaeriaceae species.

  • Botryosphaeriaceae species richness was not influenced by maximum historical temperature.

  • Optimal growth temperature of all Botryosphaeriaceae isolates in culture was 25 °C.

  • The origin of the samples was not related to the growth temperature of the isolates.

Abstract

The Botryosphaeriaceae is a family of endophytic fungi, many of which are latent pathogens of woody plants. Although extensively sampled in some parts of the world, little is known regarding their occurrence across different environmental conditions. This study considered the presence of the Botryosphaeriaceae on Syzygium cordatum trees across a latitudinal gradient. We examined the relative importance of different environmental factors on the presence of the Botryosphaeriaceae across this latitudinal gradient. Specifically, Botryosphaeriaceae community composition and species richness were analysed. The optimal growth temperature of the most common Botryosphaeriaceae isolates and its relation to isolate origin was also tested in culture. We identified 14 Botryosphaeriaceae species including seven each of Lasiodiplodia and Neofusicoccum species. The maximum historical temperature emerged as the environmental factor that best predicted the presence of Botryosphaeriaceae species in S. cordatum trees, specifically influencing Botryosphaeriaceae community composition. For all the Botryosphaeriaceae species studied in vitro, temperature strongly influenced mycelial growth and they all had an optimal growth temperature of 25 °C. Contrary to our hypothesis, the optimal growth temperature was not related to isolate origin. These results contribute to understanding the presence of the Botryosphaeriaceae in trees and our ability to detect these latent pathogens.

Introduction

The Botryosphaeriaceae is a taxonomically diverse family of endophytic fungi with a broad host plant range and wide geographic distribution. The family accommodates 23 genera including important pathogens such as species of Botryosphaeria, Diplodia, Dothiorella, Macrophomina and Neofusicoccum. All the genera have been delineated based on comparisons of DNA sequence data in combination with morphological characters (Crous et al., 2015; Phillips et al., 2013; Slippers et al., 2017).

The Botryosphaeriaceae are common on commercially cultivated and native tree species (Mehl et al., 2013; Slippers and Wingfield, 2007). Many of these fungi are latent and opportunistic plant pathogens, predominantly of woody plants (Mehl et al., 2013; Slippers and Wingfield, 2007). They infect trees via wounds or natural openings, causing disease when their hosts are stressed (Slippers and Wingfield, 2007). Diseases attributed to these fungi span all the life stages of plants including seedling damping-off and blight, stem and branch cankers and die-back, blue-stain, root rot, fruit rots, seed capsule abortion, and death of mature trees (Slippers and Wingfield, 2007).

The damage caused by pathogenic Botryosphaeriaceae has stimulated surveys for these fungi, mainly focused on commercially cultivated plants (Bihon et al., 2012; Chen et al., 2011; Trakunyingcharoen et al., 2014; Úrbez-Torres, 2011). However, these studies have not considered how abiotic variables could affect the Botryosphaeriaceae. Recently, Burgess et al. (2019) published a study examining the distribution (location and climate) and host range of these taxa in Australia. This is an important knowelege gap because environmental variables can influence fungal endophyte community composition and diversity in plant species (Coince et al., 2014; Cordier et al., 2012; Giauque and Hawkes, 2016; Peršoh, 2015). For example, tree endophyte composition differs along a gradient of elevation and the variations are correlated with changes in climatic variables in forests dominated by Fagus sylvatica (Coince et al., 2014; Cordier et al., 2012). Similarly, endophyte diversity decreases from cooler and wetter sites to warmer and drier sites in Panicum hallii (Giauque and Hawkes, 2016). Especially for the Botryosphaeriaceae, temperature is known to influence the life-cycles of these fungi, hindering or promoting spore production (Swart and Wingfleld, 1991). Consequently, environmental variables are expected to influence species presence of these fungi in natural environments.

The Botryosphaeriaceae have been extensively sampled in Syzygium cordatum, a species of Myrtaceae native to South Africa (Pavlic et al, 2004, 2007, 2009; Pavlic-Zupanc et al., 2015; Pillay et al., 2013). These studies have been prompted due to the relatedness of S. cordatum to Eucalyptus that are planted commercially in the country. Importantly, nothing is known regarding the influence of environmental variables on the presence of Botryosphaeriaceae on this tree.

S. cordatum occurs along a latitudinal gradient on the east coast of South Africa (Palgrave, 2002). Its distribution stretches from warm sub-tropical areas in the north to cooler temperate areas in the south. Trees grow in close proximity to plantations of commercially propagated non-native Eucalyptus species (Myrtaceae) that are known to be alternative hosts for several groups of important pathogens such as the Cryphonectriaceae (Mausse-Sitoe et al., 2016) but also for the Botryosphaeriaceae (Pavlic et al., 2007). Consequently, S. cordatum provides a unique opportunity for a case study to interrogate and understand the presence of the Botryosphaeriaceae across a latitudinal gradient.

The objectives of this study were to: i) identify the species of Botryosphaeriaceae present on S. cordatum trees along a latitudinal gradient on the east coast of South Africa, ii) consider the possible effect of different environmental conditions (historical-climate and current-weather) across this gradient on the presence of the Botryosphaeriaceae on these trees, and iii) determine the optimal temperature for in vitro mycelial growth of the collected Botryosphaeriaceae, in order to consider whether this might be related to isolate origin across the latitudinal gradient.

Section snippets

Study site and field sampling

Samples from apparently healthy S. cordatum trees were collected across a latitudinal gradient in South Africa. This latitudinal gradient made it possible to examine different environmental conditions on the presence of Botryosphaeriaceae (Fig. 1; Table S1). In March 2013, eleven areas where S. cordatum was present were defined. Ten trees per area, where possible, were arbitrarily selected for sampling. Three branches facing different directions were collected from the middle portion of each of

Isolate collections, phylogenetic analyses and species identifications

Of the total 104 S. cordatum trees sampled, 80 trees yielded positive isolations (159 Botryosphaeriaceae isolates). The ITS dataset consisted of 510 characters (75 parsimony informative, 414 constant, 21 parsimony uninformative), and yielded 60 equally most parsimonious trees (TL = 109, CI = 0.826, RI = 0.986, RC = 0.814). The model selected for ML analysis was TIM1ef (γ = 0.254). The tef1α dataset consisted of 312 characters (145 parsimony informative, 155 constant, 12 parsimony

Discussion

Fourteen species of Botryosphaeriaceae were identified from S. cordatum along a latitudinal gradient in South Africa. Nine of these species have previously been isolated from this host (Pavlic et al, 2007, 2009; Pillay et al., 2013). Five species were found on S. cordatum for the first time, and three species are reported from South Africa for the first time. These results are consistent with previous studies, considering not only S. cordatum (Osorio et al., 2017; Pavlic et al, 2007, 2009)

Acknowledgements

We thank the Department of Science and Innovation (DSI)-National Research Foundation (NRF) Centre of Excellence in Plant Health Biotechnology (CPHB), and members of the Tree Protection Co-operative Programme (TPCP), South Africa, for financial support. M. Vivas was supported by a post-doctoral grant from the Claude Leon Foundation and by “Juan de la Cierva Program”, Ministry of Economy, Industry and Competitiveness, Government of Spain. We are also grateful for the assistance and data provided

References (54)

  • B. Slippers et al.

    Botryosphaeriaceae as endophytes and latent pathogens of woody plants: diversity, ecology and impact

    Fungal Biology Reviews

    (2007)
  • T. White et al.

    Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics

  • M.J. Anderson

    Permutational Multivariate Analysis of Variance (PERMANOVA)

    (2017)
  • M.J. Anderson et al.

    Canonical analysis of principal coordinates: a useful method of constrained ordination for ecology

    Ecology

    (2003)
  • A.E. Arnold et al.

    Diversity and host range of foliar fungal endophytes: are tropical leaves biodiversity hotspots?

    Ecology

    (2007)
  • T.I. Burgess et al.

    Current status of the Botryosphaeriaceae in Australia

    Australas. Plant Pathol.

    (2019)
  • I. Carbone et al.

    A method for designing primer sets for speciation studies in filamentous ascomycetes

    Mycologia

    (1999)
  • S.F. Chen et al.

    Characterization of Botryosphaeriaceae from plantation-grown Eucalyptus species in south China

    Plant Pathol.

    (2011)
  • K.R. Clarke et al.

    A method of linking multivariate community structure to environmental variables

    Mar. Ecol.: Prog. Ser.

    (1993)
  • A. Coince et al.

    Leaf and root-associated fungal assemblages do not follow similar elevational diversity patterns

    PloS One

    (2014)
  • T. Cordier et al.

    The composition of phyllosphere fungal assemblages of European beech (Fagus sylvatica) varies significantly along an elevation gradient

    New Phytol.

    (2012)
  • P.W. Crous et al.

    Resolving tiarosporella spp. allied to Botryosphaeriaceae and phacidiaceae

    Phytotaxa

    (2015)
  • D. Darriba et al.

    jModelTest 2: more models, new heuristics and parallel computing

    Nat. Methods

    (2012)
  • M.L. Desprez-Loustau et al.

    Simulating the effects of a climate-change scenario on the geographical range and activity of forest-pathogenic fungi

    J. Indian Dent. Assoc.

    (2007)
  • S.E. Fick et al.

    WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas

    Int. J. Climatol.

    (2017)
  • M. Gardes et al.

    ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts

    Mol. Ecol.

    (1993)
  • N.L. Glass et al.

    Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes

    Appl. Environ. Microbiol.

    (1995)
  • Cited by (3)

    • Eucalyptus fungal diseases

      2022, Forest Microbiology: Tree Diseases and Pests: Volume 3
    1

    Current address: Institute for Dehesa Research (INDEHESA), University of Extremadura, Avenida Virgen del Puerto 2, 10600 Plasencia, Spain.

    View full text