Abstract
Gene identification and evolution and also their impacts on agronomical traits are important variations between related species which are often because of differences in the cumulative actions of multiple gene products. Understanding genetic variability for agronomic traits is important parameter of breeding programs for broadening the gene pool of different crops. The Short-Chain Dehydrogenase/Reductase (SDR) super-family is one of the largest known protein families and comprises thousands of members found in species ranging from bacteria to humans. SDR involvement has been demonstrated in a variety of primary and secondary metabolisms. Quantitative trait locus (QTL) mapping provides a starting point for dissecting complex traits into its component alleles which may help to quantify relative impacts of alleles on the traits and locates genomic regions responsible for marker-trait association, and provide a foundation of marker-assisted selection which expedites the breeding process given the proper estimation of position and the effects of QTLs. In this manuscript we have reviewed, molecular breeding and gene evolution and domestication in crops, and also survey some important reported genes which have notable impact on agronomical traits in various crops.
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Abbo S, Lev-Yadun S, Gopher A (2012) Plant domestication and crop evolution in the Near East: on events and processes. Crit Rev Plant Sci 31(3):241–257
Abbo S, van-Oss RP, Gopher A, Saranga Y, Ofner I, Peleg Z (2014) Plant domestication versus crop evolution: a conceptual framework for cereals and grain legumes. Trends Plant Sci 19(6):351–360
Abbo S, Gopher A (2017) Near Eastern plant domestication: a history of thought. Trends Plant Sci 22(6):491–511
Abbo S, Gopher A, Lev-Yadun S (2017) The domestication of crop plants. Ency Appl Plant Sci (Second Edition) 3:50–54
Adamski J, Jakob JF (2001) A guide to 17β-hydroxysteroid dehydrogenases. Mol Cell Endocrinol 171:1–4
Agrama HA (2006) Application of molecular markers in breeding for nitrogen use efficiency. J Crop Improv 15(2):175–211
Ali MB (2015) Genetic linkage maps and homology study of backcross families of german faba bean (Vicia faba L.). J Crop Improv 29(4):474–490
Allwright MR, Taylor G (2016) Molecular breeding for improved second generation bioenergy crops. Trends Plant Sci 21(1):43–54
Anderson JA, Vilgalys TP, Tung J (2020) Broadening primate genomics: new insights into the ecology and evolution of primate gene regulation. Curr Opin Genet Dev 62:16–22
Ashikawa I, Abe F, Nakamura S (2013) DOG1-like genes in cereals: investigation of their function by means of ectopic expression in Arabidopsis. Plant Sci 208:1–9
Ashkani S, Rafii MY, Shabanimofrad M, Ghasemzadeh A, Ravanfar SA, Latif MA (2016) Molecular progress on the mapping and cloning of function genes for blast disease in rice (Oryza sativa L.): current status and future considerations. Crit Rev Biotechnol 36(2):353–367
Babb S, Muehlbauer GJ (2003) Genetic and morphological characterization of the barley uniculm2 (cul2) mutant. Theor Appl Genet 106:846–857
Baek M-H, Chung BY, Kim J-H, Wi SG, An BC, Kim J-S, Lee SS, Lee I-J (2008) Molecular cloning and characterization of the flavanone-3-hydroxylase gene from Korean black raspberry. J Hortic Sci Biotechnol 83(5):595–602
Bernardo R, Yu J (2007) Prospects for genomewide selection for quantitative traits in maize. Crop Sci 47:1082–1090
Bhattacharya D, Qiu H, Lee J-M, Soon HS, Weber APM, Price DC (2018) When less is more: red algae as models for studying gene loss and genome evolution in eukaryotes. Crit Rev Plant Sci 37(1):81–99
Bohra A, Mir RR, Jha R, Maurya AK, Varshney RK (2020) Chapter 9- Advances in genomics and molecular breeding for legume improvement. Adv Crop Improv Tech 2020:129–139
Bouchez D, Hofte H (1998) Functional genomics in plants. Plant Physiol 118:725–732
Bouton JH (2007) Molecular breeding of switchgrass for use as a biofuel crop. Curr Opin Genet Dev 17(6):553–558
Brock A, Brandt W, Drager B (2008) The functional divergence of short-chain dehydrogenases involved in tropinone reduction. Plant J 54:388–401
Cao J, Li X, Lv Y (2017) Dynein light chain family genes in 15 plant species: identification, evolution and expression profiles. Plant Sci 254:70–81
Cardoso HG, Campos MD, Costa AR, Campos MC, Nothnagel T, Arnholdt-Schmitt A (2009) Carrot alternative oxidase gene AOX2a demonstrates allelic and genotypic polymorphisms in intron 3. Physiol Plant 137:592–608
Carrier G, Huang Y-F, Cunff LL, Fournier-Level A, Vialet S, Souqut J-M, Cheynier V, Terrier N, This P (2013) Selection of candidate genes for grape proanthocyanidin pathway by an integrative approach. Plant Physiol Biochem 72:87–95
Castren E, Kontkanen O (2002) Functional genomics in neuropsychiatric disorders and in neuropharmacology. Expert Opin Ther Targets 6(3):363–374
Cerda J, Bobe J, Babin PJ, Admon A, Lubzens E (2008) Functional genomics and proteomic approaches for the study of gamete formation and viability in farmed finish. Rev Fish Sci 16(Sup 1):56–72
Chacon-Fuentes M, Bardehle L, Lizama M, Seguel I, Quiroz A (2019) Restoration of flavonolds and isoflavonoids in Ugni molinae subjected to a reciprocal transplant experiment in a domestication framework. Chem Ecol 35(2):115–127
Chai Y, Zhao L, Liao Z, Sun X, Zuo K, Zhang L, Wang S, Tang K (2003) Molecular cloning of a potential Verticillium dahliae resistance gene SlVe1 with multi-site polyadenylation from Solanum licopersicoides. DNA Seq 14(5):375–384
Che G, Zhang X (2019) Molecular basis of cucumber fruit domestication. Curr Opin Plant Biol 47:38–46
Chen YH, Ruiz-Arocho J, von Wettberg EJB (2018) Crop domestication: anthropogenic effects on insect-plant interactions in agroecosystems. Curr Opin Insect Sci 29:56–63
Cheng W-H, Endo A, Zhou L, Penney J, Chen H-C, Arroyo A, Leon P, Nambara E, Asami T, Seo M, Koshiba T, Sheen J (2002) A unique short-chain dehydrogenase/reductase in Arabidopsis glucose signaling and abscisic acid biosynthesis and functions. Plant Cell 14:2723–2743
Chowrasia S, Panda AK, Rawal HC, Kaur H, Mondal TK (2018) Identification of jumonjiC domain containing gene family among the Oryza species and their expression analysis in FL478, a salt tolerant rice genotype. Plant Physiol Biochem 130:43–53
Clarke JW, Donoghue PCJ (2018) Whole-genome duplication and plant macroevolution. Trends Plant Sci 23(10):933–945
Coelho CP, Huang P, Lee D-Y, Brutnell TP (2018) Making roots, shoots and seeds: IDD gene family diversification in plants. Trends Plant Sci 23(1):66–78
Cong B, Barrero LS, Tanksley SD (2008) Regulatory change in YABBY-like transcription factor led to evolution of extreme fruit size during tomato domestication. Nat Genet 40:800–804
Costa A, Di Giacomo M, Massarelli I, De Palma M, Leone A, Grillo MS (2010) Isolation, characterization and expression of an elongation factor 1α gene in potato (Solanum tuberosum) cell cultures. Plant Biosyst 618–625
Dabbert T, Okagaki RJ, Cho S, Boddu J, Muehlbauer GJ (2009) The genetics of barley low-tillering mutants: absent lower laterals (als). Theor Appl Genet 118:1351–1360
Dabbert T, Okagaki RJ, Cho S, Heinen S, Boddu J, Muehlbauer GJ (2010) The genetic of barley low-tillering mutants: low number of tillers-1 (Int1). Theor Appl Genet 121:705–715
Di Gaspero G, Foria S (2015) Molecular grapevine breeding techniques. Grapevine Breeding Programs for the Wine Industry 2015:23–37
Dong Z, Alexander M, Chuck G (2019) Understanding grass domestication through maize mutants. Trends Genet 35(2):118–128
Dorn G, Hall J, Husken D, Lange J, Martin P, Natt F, Wishart WL, Weiler J (2003) A role for oligonucleotide-based RNA-knock down technologies in functional genomics. Necleosides, Necleotides Nucleic Acids 22:5–8
Duan P, Xu J, Zeng D, Zhang B, Geng M, Zhang G, Huang K, Huang L, Xu R, Ge S, Qian Q, Li Y (2017) Natural variation in the promoter of GSE5 contributes to grain size diversity in rice. Mol Plant 10:685–694
Dwivedi SL, Crouch JH, Nigam SN, Ferguson ME, Paterson AH (2003) Molecular breeding of groundnut for enhanced productivity and food security in the semi-arid tropics: opportunities and challenges. Adv Agron 80:153–221
Dwivedi SL, Crouch JH, Mackill DJ, Xu Y, Blair MW, Ragot M, Upadhyaya HD, Ortiz R (2007) The molecularization of public sector crop breeding: progress, problems and prospects. Adv Agron 95:163–318
Ebert B, Kisiela M, Maser E (2016) Transcriptional regulation of human and murine short-chain dehydrogenase/reductases (SDRs)- an in silico approach. Drug Metab Rev 48(2):183–217
Eness J, Del Cardayre SB, Minshull J, Stemmer WPC (2001) Molecular breeding: the natural approach to protein design. Adv Protein Chem 55:261–292
Fan C, Xing Y, Mao H, Lu T, Han B, Xu C, Li X, Zhang Q (2006) GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein. Theor Appl Genet 112:1164–1171
Fan Y, Guo H, Wei J, Zhang Y, Wu J, Zeng F (2020) Meiosis, the master driver of gene duplication in higher plants? Biochem Biophys Res Commun 514(3):756–758
Fei J, Chai Y, Wang J, Lin J, Sun X, Sun C, Zuo K, Tang K (2004) cDNA cloning and characterization of the Ve homologue gene StVe from Solanum torvum Swartz. DNA Sequence 15(2):88–95
Feng L, Li G, He Z, Han W, Sun J, Huang F, Di J, Chen Y (2019) The ARF, GH3, and Aux/IAA gene families in castor bean (Ricinus communis L.): Genome-wide identification and expression profiles in high-stalk and dwarf strains. Ind Crops Prod 141:111804
Feng D, Gao L, Zheng Y, Li D, Zhou P (2020) Molecular cloning and function characterization of a cytoplasmic fructose-1, 6-bisphosphate aldolase gene from coconut (Cocos nucifera L.). J Hortic Sci Biotechnol. https://doi.org/10.1080/14620316.2020.1749139
Ferreira MDG, Castro JA, Silva RJS, Micheli F (2019) HVA22 from citrus: a small gene family whose some members are involved in plant response to abiotic stress. Plant Physiol Biochem 142:395–404
Fields S, Kohara Y, Lockhart DJ (1999) Functional genomics. Proc Natl Acad Sci 96:8825–8826
Francki M, Appeles R (2002) Wheat functional genomics and engineering crop improvement. Genome Biol 3:1013.1-1013.5
Frary A, Nesbitt TC, Frary A, Grandillo S, van der Knaap E, Cong B, Liu J, Meller J, Elber R, Alpert KB et al (2000) Fw2.2: a quantitative trait locus key to the evolution of tomato fruit size. Science 289:85–88
Frenkel ZM, Trifonov EN (2012) Origin and evolution of genes and genomes. Crucial role of triplet expansions. J Biomol Struct Dyn 30(2):201–210
Fu Q, Zhang P, Tan L, Zhu Z, Ma D, Fu Y, Zhan X, Cai H, Sun C (2010) Analysis of QTLs for yield-related traits in Yuanjiang common wild rice (Oryza rufipogon Griff.). J Genet Genom 37(2):147–157
Gao Y, Zhao H, Jin Y, Xu X, Han G-Z (2017) Extent and evolution of gene duplication in DNA viruses. Virus Res 240:161–165
Gebhardt C (2013) Bridging the gap between genome analysis and precision breeding in potato. Trends Genet 29(4):248–256
Gebre E, Hedden P, Kunert K, Schluter U (2013) Isolation, characterization, and expression of the rice sd-1 (GA20ox) gene ortholog in Eragrostis tef. J Improve 27(5):50–527
Gepts P (2014) The contribution of genetic and genomic approaches to plant domestication studies. Curr Opin Plant Biol 18:51–59
Guindo D, Teme N, Vaksmann M, Doumbia M, Vilmus I, Guitton B, Sissoko A, Mestres C, Davrieux F, Fliedel G, Kouressy M, Courtois B, Rami J-F (2019) Quantitative trait loci for sorghum grain morphology and quality traits: toward breeding for a traditional food preparation of West-Africa. J Cereal Sci 85:256–272
Gutterson NC (1993) Molecular breeding for color, flavor and fragrance. Sci Hortic 55(1–2):141–160
Ha JH, Jang HA, Moon L-B, Baek KH, Choi GJ, Choi D, Cho HS, Kwon SY, Jeon J-H, Oh S-K, Kim H-S (2017) Nicotiana benthamiana Matrix Metalloprotease 1 (NMMP1) gene confers disease resistance to Phytophthora infestans in tobacco and potato plants. J Plant Physiol 218:189–195
Haley B, Roudnicky F (2020) Functional genomics for cancer drug target discovery. Cancer Cell 38(1):31–43
Harrison PW, Wright AE, Mank JE (2012) The evolution of gene expression and the transcriptome-phenotype relationship. Semin Cell Dev Biol 23(2):222–229
Hayes B, He J, Moen T, Bennewitz J (2006) Use of molecular markers to maximize diversity of founder populations for aquaculture breeding programs. Aquaculture 255(1–4):573–578
Hoffmann F, Maser E (2007) Carbonyl reductases and pluripotent hydroxysteroid dehydrogenases of the short-chain dehydrogenase/reductase superfamily. Drug Metab Rev 39(1):87–144
Holtorf H, Guitton M-C, Reski R (2002) Plant functional genomics. Naturwissenschaften 89:235–249
Hu K, Cao J, Zhang J, Xia F, Ke Y, Zhang H, Xie W, Liu H, Cui Y, Cao Y, Sun X, Xiao J, Li X, Zhang Q, Wang S (2017) Improvement of multiple agronomic traits by a disease resistance gene via cell wall reinforcement. Nature Plants 17(3):17009
Huang B, Liu X, Wang X, Pi Y, Zeng H, Lin J, Fei J, Sun X, Tan K (2005) Genomic cloning and characterization of a Pto-like gene SsPto-2 from Solanum surattense. DNA Seq 16(4):277–287
Huang K, Wang D, Duan P, Zhang B, Xu R, Li N, Li Y (2017) WIDE AND THICK GRAIN 1, which encodes an otubain-like protease with deubiquitination activity, influences grain size and shape in rice. Plant J 91:849–860
Huang J-F, Li L, Mao X-G, Wang J-Y, Liu H-M, Li C-N, Jing R-L (2020) dCAPS markers developed for nitrate transporter genes TaNRT2L12s associating with 1000-grain weight in wheat. J Integr Agric 19(6): 1543–1553
Housman G, Gilad Y (2020) Prime time for primate functional genomics. Curr Opin Genet Dev 62:1–7
Huang J-J (2013) Knowledge diffusion models-perspectives of gene evolution and population dynamics. Knowl Manag Res Pract 11(3):313–322
Huminiecki L, Horbanczuk J, Atanasov AG (2017) The functional genomics studies of curcumin. Semin Cancer Biol 46:107–118
Ishikawa S (2020) Mechanisms of cadmium accumulation in rice grains and molecular breeding for its reduction. Soil Sci Plant Nutr 66(1):28–33
Jacob P, Avni A, Bendahmane A (2018) Translational research: Exploring and creating genetic diversity. Trends Plant Sci 23(1):42–52
Jain A, Roorkiwal M, Kale S, Garg V, Yadala R, Varshney RK (2019) InDel markers: An extended marker resource for molecular breeding in chickpea. PLoS ONE 14(3):e0213999
Janila P, Pandey MK, Shasidhar Y, Variath M, Sriswathi M, Khera P, Manohar SS, Nagesh P, Vishwakarma MK, Mishra GP, Radhakrishnan T, Manivannan N, Dobariya KL, Vasanthi RP, Varshney RK (2016) Molecular breeding for introgression of fatty acid desaturase mutant alleles (ahFAD2A and ahFAD2B) enhances oil quality in high and low oil containing peanut genotypes. Plant Sci 242:203–213
Jares P (2006) DNA microarray applications in functional genomics. Ultrastruct Pathol 30(3):209–219
Jefferies SP, King BJ, Barr AR, Warner P, Logue SJ, Langridge P (2003) Marker-assisted backcross introgression of the yd2 gene conferring resistance to barley yellow dwarf virus in barley. Plant Breed 122:52–56
Jia T, Bin Z, Shu-Ping L, Xiu-gen L, Bin W, Jiang L (2016) Cloning, localization and expression analysis of two fw2.2-like genes in small- and large-fruited pear species. J Integr Agric 15(2):282–294
Jia S, Xiong Y, Ziao P, Wang X, Yao J (2019) OsNF-YC10, a seed preferentially expressed gene regulates grain width by affecting cell proliferation in rice. Plant Sci 280:219–227
Jiang Y, Cai Z, Xie W, Long T, Yu H, Zhang Q (2012) Rice functional genomics research: progress and implications for crop genetic improvement. Biotechnol Adv 30(5):1059–1070
Jiang L, Liu X, Xiong G, Liu H, Chen F, Wang L, Meng X, Liu G, Yu H, Yuan Y, Yi W, Zhao L, Ma H, He Y, Wu Z, Melcher K, Qian Q, Xu HE, Wang Y, Li J (2013) DWARF 53 acts as a repressor of strigolactone signaling in rice. Nature 504:401–405
Jiang W, Geng Y, Liu Y, Chen S, Cao S, Li W, Chen H, Ma D, Yin J (2020) Genome-wide identification and characterization of SRO gene family in wheat: molecular evolution and expression profiles during different stresses. Plant Physiol Biochem 154:590–611
Jiao Y, Wang Y, Xue D, Wang J, Yan M, Liu G, Dong G, Zeng D, Lu Z, Zhu X, Qian Q, Li J (2010) Regulation of OsSPL14 by OsmiR156 defines ideal plant architecture in rice. Nat Genet 42:541–544
Jin S, Nasim Z, Susila H, Ahn JH (2020) Evolution and functional diversification of Flowering Locus T/Terminal Flower 1 family genes in plants. Semin Cell Dev Biol. DOI:https://doi.org/10.1016/j.semcdb.2020.05.007
Jones DM, Vandepoele K (2020) Identification and evolution of gene regulatory networks: insights from comparative studies in plants. Curr Opin Plant Biol 54:42–48
Jornvall H, Persson B, Krook M, Atrian S, Gonzalez-Duarte R, Jeffery J, Ghosh D (1995) Short-chain dehydrogenases/reductases (SDR). Biochemistry 34(18):6003–6013
Kallberg Y, Oppermann U, Jornvall H, Persson B (2002) Short-chain dehydrogenases/reductases (SDRs). Eur J Biochem 269(18):4409–4417
Kaushik S, Kaushik S, Sharma D (2019) Functional genomics. Ency Bioinform Comput Biol 2:118–133
Keller B, Volkmann A, Wilckens T, Moeller G, Adamski J (2006) Bioinformatic identification and characterization of new members of short-chain dehydrogenase/reductase superfamily. Mol Cell Endocrinol 248(1–2):56–60
Khalil F, Yueyu X, Naiyan X, Di L, Tayyab M, Hengbo W, Islam W, Rauf S, Pinghua C (2018) Genome characterization of sugarcane yellow leaf virus with special reference to RNAi based molecular breeding. Microb Pathog 120:187–197
Khuman A, Arora S, Makkar H, Patel A, Chaudhary B (2020) Extensive intragenic divergences amongst ancient WRKY transcription factor gene family is largely associated with their functional diversity in plants. Plant Gene 22:100222
Klee HJ, Resende MFR (2020) Plant domestication: Reconstructing the route to modern tomatoes. Current Biol 30(8):R359–R361
Kobayashi S, Fukuta Y, Yagi T, Sato T, Osaki M, Khush GS (2004) Identification and characterization of quantitative trait loci affecting spikelet number per panicle in rice (Oryza sativa L.). Field Crops Res 89(2–3):253–262
Komatsuda T, Pourkheirandish M, He C, Azhaguvel P, Kanamori H, Perovic D, Stein N, Graner A, Wicker T, Tagiri A et al (2007) Six-rowed barley originated from a mutation in a homeodomain-leucine zipper l-class homeobox gene. Proc Natl Acad Sci USA. 104: 1424–1429
Koppolu R, Anwar N, Sakuma S, Tagiri A, Lundqvist U, Pourkheirandish M, Rutten T, Seiler C, Himmelbach A, Ariyadasa R, Youssef HM, Stein N, Sreenivasulu N, Komatsuda T, Schnurbusch T (2013) Six-rowed spike4 (Vrs4) controls spikelet determinacy and row-type in barley. Proc Natl Acad Sci USA 110(32):13198–13203
Kouprina N, Larionov V (2019) TAR cloning: Perspectives for functional genomics, biomedicine, and biotechnology. Mol Ther Meth Clin Develop 14:16–26
Langridge P (2005) Molecular breeding of wheat and barley, in In the Wake of Double Helix. In: Tuberosa R, Phillips RL, Gale M (eds) From the green revolution to the gene revolution. Avenue Media, Bologna, pp 279–286
Lata C, Gupta S, Prasad M (2013) Foxtain millet: a model crop for genetic and genomic studies in bioenergy grasses. Crit Rev Biotechnol 33(3):328–343
Lei M, Li Z-Y, Wang J-B, Fu Y-L, Xu L (2019) Ectopic expression of the Aechmea fasciata APETALA2 gene AfAP2-2 reduces seed size and delays flowering in Arabidopsis. Plant Physiol Biochem 139:642–650
Lenser T, TheiBen G (2013) Molecular mechanisms involved in convergent crop domestication. Trends Plant Sci 18(12):704–714
Lema M (2018) PMarker assisted selection in comparison to conventional plant breeding: Review article. Agric Res Technol Open Access J 14(2):555914
Li X, Qian Q, Fu Z, Wang Y, Xiong G, Zeng D, Wang X, Liu X, Teng S, Hiroshi F et al (2003) Control of tillering in rice. Nature 422:618–621
Li H, Yang X, Lu M, Chen J, Shi T (2020) Gene expression and evolution of Family-1 UDP-glycosyltransferases-insights from an aquatic flowering plant (sacred lotus). Aquat Bot 166:103270
Lichman BR, Godden G, Buell CR (2020) Gene and genome duplications in the evolution of chemodiversity: perspectives from studies of Lamiaceae. Curr Opin Plant Biol 55:74–83
Lin Q, Wang D, Dong H, Gu S, Cheng Z, Gong J, Qin R, Jiang L, Li G, Wang JL et al (2012) Rice APC/CTE controls tillering by mediating the degradation of MONOCULM1. Nat Commun 3:752
Liu Q, Chen Y-Q (2010) A new mechanism in plant engineering: the potential roles of microRNAs in molecular breeding for crop improvement. Biotechnol Adv 28(3):301–307
Liu YB, Wei W, Ma KP, Darmency H (2010) Backcrosses to Brassica napus of hybrids between B. juncea and B. napus as a source of herbicide-resistant volunteer-like feral populations. Plant Sci 179:459–465
Liu Z, Li H, Fan X, Huang W, Yang J, Wen Z, Li Y, Guan R, Guo Y, Chang R, Wang D, Chen P, Wang S, Qiu L-J (2017a) Phenotypic characterization and genetic dissection of nine agronomic traits in Tokachi nagaha and its derived cultivars in soybean (Glycine max (L.) Merr.). Plant Sci 256:72–86
Liu J, Chen J, Zheng X, Wu F, Lin Q, Heng Y, Tian P, Cheng Z, Yu X, Zhou K, Zhang X, Guo X, Wang J, Wang H, Wan J (2017b) GW5 acts in the brassinosteroid signaling pathway to regulate grain width and weight in rice. Nat Plants 3:17043
Liu Q, Han R, Wu K, Zhang J, Ye Y, Wang S, Chen J, Pan Y, Li Q, Xu X, Zhou J, Tao D, Wu Y, Fu X (2018) G-protein betagamma subunits determine grain size through interaction with MADS-domain transcription factors in rice. Nat Commun 9:852
Liu H, Liu H, Zhou L, Lin Z (2019) Genetic architecture of domestication-and improvement-related traits using a population derived from Sorghum virgatum and Sorghum bicolor. Plant Sci 283:135–146
Liu F-H, Yang F (2020) Male sterility induction and evolution of cytoplasmic male sterility related atp9 gene from Boehmeria nivea (L.) Gaudich. Ind Crops Prod 156:112861
Liu J, Fernie AR, Yan K (2020) The part, present, and future of maize improvement: domestication, genomics and functional genomics routes toward crop enhancement. Plant Commun 1:100010
Long Y, Liang F, Zhang J, Xue M, Zhang T, Pei X (2020) Identification of drought response genes by digital gene expression (DGE) analysis in Caragana korshinskii Kom. Gene 725:144170
Luo J, Liu H, Zhou T, Gu B, Huang X, Shangguan Y, Zhu J, Li Y, Zhao Y, Wang Y et al (2013) An-1 encodes a basic helix-loop-helix protein that regulates awn development, grain size, and grain number in rice. Plant Cell 25:3360–3376
Ma Y, Lu S (2012) T-DNA tagging: a promising tool for functional genomics in medicinal plants. Single Cell Biol 1:e106
Mahalakshmi V, Ortiz R (2001) Plant genomics and agriculture: From model organisms to crops, the role of data mining for gene discovery. EJB Electron J Biotechnol 4(3):169–178
Makhzoum A, Yousefzadi M, Malik S, Gantet P, Tremouillaux-Guiller J (2017) Strigolactone biology: genes, functional genomics, epigenetics and applications. Crit Rev Biotechnol 37(2):151–162
Manzoor MA, Cheng X, Li G, Su X, Abdullah M, Cai Y (2020) Gene structure, evolution and expression analysis of the P-ATPase gene family in Chinese pear (Pyrus bretschneideri). Comput Biol Chem 88:107346
Mao H, Sun S, Yao J, Wang C, Yu S, Xu C, Li X, Zhang Q (2010) Linking differential domain functions of the GS3 protein to natural variation of grain size in rice. Proc Natl Acad Sci USA 107:19579–19584
Martinez-Romero E, Aguirre-Noyola JL, Taco-Taype N, Martinez-Romero J, Zuniga-Davila D (2020) Plant microbiota modified by plant domestication. Syst Appl Microbiol 43(5):126106
Mathan J, Bhattacharya J, Ranjan A (2016) Enhancing crop yield by optimizing plant developmental features. Development 143:3283–3294
Matsunaga T, Endo S, Maeda S, Ishikura S, Tajima K, Tanaka N, Nakamura KT, Imamura Y, Hara A (2008) Characterization of human DHRS4: an inducible short-chain dehydrogenase/reductase enzyme with 3β-hydroxysteroid dehydrogenase activity. Archives Arch Biochem Biophys 477(2):339–347
Mehta BK, Muthusamy V, Zunjare RU, Baveja A, Chauhan HS, Chhabra R, Singh AK, Hossain F (2020) Biofortification of sweet corn hybrids for provitamin-A, lysine and tryptophan using molecular breeding. J Cereal Sci. https://doi.org/10.1016/j.jcs.2020.103093
Meuwissen THE, Hayes BJ, Goddard ME (2001) Prediction of total genetic value genome-wide dense marker maps. Genetics 157:1819–1829
Micallef MC, Austin S, Bingham ET (1995) Improvement of transgenic alfalfa by backcrossing. In Vitro Cell Dev Biol 31:187–192
Milla R, Osborne CP, Turcotte MM, Violle C (2015) Plant domestication through an ecological lens. Trends Ecol Evol 30(8):463–469
Minshull J, Stemmer PCW (1999) Protein evolution by molecular breeding. Curr Opin Chem Biol 3(3):284–290
Miura K, Ikeda M, Matsubara A, Song XJ, Ito M, Asano K, Matsuoka M, Kitano H, Ashikari M (2010) OsSPL14 promotes panicle branching and higher grain productivity in rice. Nat Genet 42:545–549
Mizuno H, Kasuga S, Kawahigashi H (2016) The sorghum SWEET gene family: stem sucrose accumulation as revealed through transcriptome profiling. Biotechnol Biofuels 9:127
Morozova O, Marra MA (2008) Applications of next-generation sequencing technologies in functional genomics. Genomics 92:255–264
Mosse SP, Mumm RH (2008) Molecular plant breeding as the foundation for 21st century crop improvement. Plant Physiol 147:969–977
Moummou H, Kallberg Y, Tonfack LB, Persson B, van der Rest B (2012) The plant short-chain dehydrogenase (SDR) superfamily: genome-wide inventory and diversification patterns. BMC Plant Biol 12:219
Nakazawa M, Ichikawa T, Ishikawa A, Kobayashi H, Tsuhara Y et al (2003) Activation tagging, a novel tool to dissect the functions of gene family. Plant J 34:741–750
Narayanan NN, Baisakh N, Vera Cruz CM, Gnanamanickam SS, Datta K, Datta SK (2002) Molecular breeding for the development of blast and bacterial blight resistance in rice cv. IR50. Crop Sci 42:2072–2079
Nimisha S, Kherwar D, Ajay KM, Singh B, Usha K (2013) Molecular breeding to improve guava (Psidium guajava L.): current status and future prospective. Scientia Hortic 164:578–588
Niu X, Luo D, Gao S, Ren G, Chang L, Zhou Y, Luo X, Li Y, Hou P, Tang W, Lu B-R, Liu Y (2010) A conserved unusual posttranscriptional processing mediated by short, direct repeated (SDR) sequences in plants. J Genet Genomics 37(1):85–99
Noulas C, Tziouvalekas M, Vlachostergios D, Baxevanos D, Karyotis T, Iliadis C (2017) Adaptation, agronomic potential and current perspectives of quinoa under Mediterranean conditions: case studies from the lowlands of central Greece. Commun Soil Sci Plant Anal 48(22):2612–2629
Ordonio R, Ito Y, Morinaka Y, Sazuka T, Matsuoka M (2016) Chapter five- molecular breeding of Sorghum bicolor, a novel energy crop. Int Rev Cell Mol Biol 321:221–257
Palfreyman MG (1998) Functional genomics conference: From identifying proteins to faster drug discovery. Expert Opin Invetig Drugs 7(7):1201–1207
Pang Y, Liu C, Wang D, Amand PSt, Bernardo A, Li W, He F, Li L, Wang L, Yuan X, Dong L, Su Y, Zhang H, Zhao M, Liang Y, Jia H, Shen X, Liu S (2020) High-resolution genome-wide association study identifies genomic regions and candidate genes for important agronomic traits in wheat. Mol Plant 13(9):1311–1327
Paul S, Ali N, Gayen D, Datta SK, Datta K (2012) Molecular breeding of Osfer2 gene to increase iron nutrition in rice grain. GM Crops Food 3(4):310–316
Pavy N, Pelgas B, Laroche J, Rigault P, Isabel N, Bousquet J (2012) A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers. BMC Biol 10:84
Persson B, Kallberg Y (2013) Classification and nomenclature of the superfamily of short-chain dehydrogenases/reductases (SDRs). Chem Biol Interact 202(1–3):111–115
Poursarebani N, Trautewig C, Melzer M, Nussbaumer T, Lundqvist U, Rutten T, Schmutzer T, Brandt R, Himmelbach A, Altschmied L, Koppolu R, Youssef HM, Sibout R, Dalmais M, Bendahmane A, Stein N, Xin Z, Schnurbusch T (2020) COMPOSITUM1 contributes to the architectural simplification of barley inflorescence via meristem identity signals. Nat Commun 11(1):5138
Qian Y, Huang S-SC (2020) Improving plant gene regulatory network inference by integrative analysis of multi-omics and high resolution data sets. Curr Opin Syst Biol. https://doi.org/10.1016/j.coisb.2020.07.010
Qiu Z, Fang C, Gao Q, Bao J (2020) A short-chain dehydrogenase plays a key wolrd in cellulosic D-lactic acid fermentability of Pediococcus acidilactici. Bioresour Technol 297:122473
Oppermann U, Filling C, Hult M, Shafqat N, Wu X, Lindh M, Shafqat J, Nordling E, Kallberg Y, Persson B, Jornvall H (2003) Short-chain dehydrogenases/reductases (SDR): the 2002 update. Chemico-Biol Interact 143–144:247–253
Ozseyhan ME, Kang J, Mu X, Lu C (2018) Mutagenesis of the FAE1 genes significantly changes fatty acid composition in seeds of Camelina sativa. Plant Physiol Biochem 123:1–7
Rai A, Yamazaki M, Saito K (2019) A new era in plant functional genomics. Curr Opin Syst Biol 15:58–67
Ranade SA, Farooqui N, Bhattacharya E, Verma A (2001) Gene tagging with random amplified polymorhphic DNA (RAPD) markers for molecular breeding in plants. Crit Rev Plant Sci 20(3):251–275
Rensing SA (2014) Gene duplication as a driver of plant morphogenetic evolution. Curr Opin Plant Biol 17:43–48
Rezan T, Contreras JA, Rozman D (2007) Functional genomics approaches to studies of the cytochrome P450 superfamily. Drug Metab Rev 39(2–3):389–399
Roy S, Banerjee A, Tarafdar J, Senapati BK, Dasgupta I (2011) Transfer of transgenes for resistance to rice tungro disease into high-yielding rice cultivars through genebased marker-assisted selection. J Agric Sci 150:610–618
Roy S, Banerjee A, Tarafdar J, Senapati BK (2012) Detection of probable marker-free transgene-positive rice plants resistant to rice tungro disease from backcross progenies of transgenic Pusa Basmati 1. J Gene 91:213–218
Rusanov K, Kovacheva N, Atanassov A, Atanassov I (2009) Rosa Damascena-Genetics of a complex allotetraploid species and perspectives for molecular breeding. Biotechnol Biotechnol Equip 23(Sup1):594–596
Salaria N, Siddappa S, Thakur K, Tomar M, Goutam U, Sharma N, Sood S, Bhardwaj V, Singh B (2020) Solanum tuberosum (CYCLING DOF FACTOR) CDF1.2 allele: A candidate gene for developing earliness in potato. S Afr J Bot 132:242–248
Schiessl S-V, Katche E, Ihien E, Chawla HS, Mason AS (2019) The role of genomic structural variation in the genetic improvement of polyploidy crops. Crop J 7:127–140
Shelef O, Guy O, Solowey E, Kam M, Degen AA, Rachmilevitch S (2016) Domestication of plants for sustainable agriculture in drylands: experience from the Negec desert. Arid Res Manag 30(2):209–228
Sigmon B, Vollbrecht E (2010) Evidence of selection at the ramosa1 locus during maize domestication. Mol Ecol 19:1296–1311
Signor SA, Nuzhdin SV (2018) The evolution of gene expression in cis and trans. Trends in Genetics 34(7):532–544
Singh S, Sidhu JS, Huang N, Vikal Y, Li Z, Brar DS, Dhaliwal H, Khush GS (2001) Pyramiding three bacterial blight resistance genes (xa-5, xa-13 and Xa21) using marker-assisted selection into indica rice cultivar RP106. Theor Appl Genet 102:1011–1015
Singh J, Zhao J, Vallejos CE (2018) Differential transcriptome patterns associated with early seedling development in a wild and a domesticated common bean (Phaseolus vulgaris L.) accession. Plant Sci 274:153–162
Soltis P, Marchant DB, Peer YVD, Soltis DE (2015) Polyploidy and genome evolution in plants. Curr Opin Genet Dev 35:119–125
Sonawane PD, Heinig U, Panda S, Gilboa NS, Yona M, Kumar P, Alkan N, Unger T, Bocobza S, Pliner M, Malitsky, Tkachev M, Meir S, Rogachev I, Aharoni A (2018) Short-chain dehydrogenase/reductase governs steroidal specialized metabolites structural diversity and toxicity in the genus Solanum. Proc Natl Acad Sci USA 115(23):E5419–E5428
Springer PS (2000) Gene traps: tools for plant development and genomics. Plant Cell 12:1007–1020
Stemmer WPC (2002) Molecular breeding of genes, pathways and genomes by DNA shuffling. J Mol Catal B: Enzym 19–20:3–12
Sun F, Zhang W, Xiong G, Yan M, Qian Q, Li J, Wang Y (2010) Identification and functional analysis of the MOC1 interacting protein 1. J Genet Genomics 37(1):69–77
Sun Y, Li Y, Huang G, Wu Q, Wang L (2017) Application of the yeast one-hybrid technique to plant functional genomics studies. Biotechnol Biotechnol Equip 31(6):1087–1092
Swamy BPM, Descalsota GIL, Nha CT, Amparado A, Inabangan-Asilo MA, Manito C et al (2018) Identification of genomic regions associated with agronomic and biofortification traits in DH populations of rice. PLOS ONE 13(8):e0201756
Swinnen G, Goossens A, Pauwels L (2016) Lessons from domestication: Targeting cis-regulatory elements for crop improvement. Trends in Plant Sci 21(6):506–515
Tabbita F, Pearce S, Barneix AJ (2017) Breeding for increased grain protein and micronutrient content in wheat: Ten years of the GPC-B1 gene. J Cereal Sci 73:183–191
Taketa S, Amano S, Tsujino Y, Sato T, Saisho D, Kakeda K, Nomura M, Suzuki T, Matsumoto T, Sato K et al (2008) Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway. Proc Natl Acad Sci USA 105:4062–4067
Tavakol E, Okagaki R, Verderio G, Shariati JV, Hussein A, Bilgic H, Scanlon MJ, Todt NR, Close TJ, Druka A et al (2015) The barley Uniculme4 gene encodes a BLADE-ON-PETIOLE-like protein that controls tillering and leaf patterning. Plant Physiol 168:164–174
Tian Y, Zhang M, Hu X, Wang L, Dai J, Xu Y, Chen F (2016) Over-expression of CYP78A98, a cytochrome P450 gene from Jatropha curcas L., increases seed size of transgenic tobacco. Electron J Biotechnol 19:15–22
Toenniessen GH, O,Toole JC, DeVries J (2003). Advances in plant biotechnology and its adoption in developing countries. Curr Opin Plant Biol 6:191–198
Tonfack LB, Moummou H, Latche A, Youmbi E, Benichou M, Pech JC et al (2011) The plant SDR superfamily: involvement in primary and secondary metabolism. Curr Top Plant Biol 12:41–53
Tong H, Jin Y, Liu W, Li F, Fang J, Yin Y, Qian Q, Zhu L, Chu C (2009) DWARF and low-tillering, a new member of the GRAS family, plays positive roles in brassinosteroid signaling in rice. Plant J 58:803–816
Toojinda T, Tragoonrung S, Vanavichit A, Siangliw JL, Pa-In N, Jantaboon J, Siangliw M, Fukai S (2005) Molecular breeding for rainfed lowland rice in Mekong region. Plant Prod Sci 8(3):330–333
Van Esse GW, Walla A, Finke A, Koornneef M, Pecinka A, von Korff M (2017) Six-rowed spike3 (VRS3), is a histone demethylase that controls lateral spikelet development in barley. Plant Physiol 174(4):2397–2408
Varshney RK, Langridge P, Graner A (2007) Application of genomics to molecular breeding of wheat and barley. Adv Genet 58:121–155
Venkanna D, Sudfeld C, Baier T, Homburg SV, Patel AV, Wobbe L, Kruse O (2017) Knock-down of the IFR1 protein perturbs the homeostasis of reactive electrophile species and boosts photosynthetic hydrogen production in Chlamydomonas reinhardtii. Front Plant Sci 8:1347
Verdeprado H, Kretzschmar T, Begum H, Raghavan C, Joyce P, Lakshmanan P, Cobb JN, Collard BCY (2018) Association mapping in rice: basic concepts and perspectives for molecular breeding. Plant Product Sci 21(3):159–176
Wang X-M, Liang Y-Y, Li L, Gong C-W, Wang H-P, Huang X-X, Li S-C, Deng Q-M, Zhu J, Zheng A-P, Li P, Wang S-Q (2015) Identification and cloning of tillering-related genes OsMAX1 in rice. Rice Sci 22(6):255–263
Wang S, Wu K, Qian Q, Liu Q, Li Q, Pan Y, Ye Y, Liu X, Wang J, Zhang J, Li S, Wu Y, Fu X (2017) Non-canonical regulation of SPL transcription factors by a human OTUB1-like deubiquitinase defines a new plant type rice associated with higher grain yield. Cell Res 27:1142–1156
Wang H, Ni X, Harris-Shultz K (2019a) Molecular evolution of the plant ECERIFERUM1 and ECERIFERUM3 genes involved in aliphatic hydrocarbon production. Comput Biol Chem 80:1–9
Wang YL, Ye H, Liu L, Wu JH, Ru WM, Sun GL (2019b) Molecular insights on domestication of barley (Hordeum vulgare L.). Crit Rev Plant Sci 38(4):280–294
Wang J, Zhang Z, Wu J, Han X, Wang-Pruski G, Zhang Z (2020a) Genome-wide identification, characterization, and expression analysis related to autotoxicity of the GST gene family in Cucumis melo L. Plant Physiol Biochem 155:59–69
Wang Y, Wan S, Fan H, Yan M, Li W, Guan R (2020b) A sulfotransferase gene BnSOT-like1 has a minor genetic effect on seed glucosinolate content in Brassica napus. Crop J. https://doi.org/10.1016/j.cj.2020b.07.003
Wang Y, Sun J, Ali SS, Gao L, Ni X, Li X, Wu Y, Jiang J (2020c) Identification and expression analysis of Sorghum bicolor gibberellins oxidase genes with varied gibberellins levels involved in regulation of stem biomass. Ind Crops Prod 145:111951
Warren JM, Solan DB (2020) Interchangeable parts: The evolutionarily dynamic tRNA population in plant mitochondria. Mitochondrion 52:144–156
Wijerathna YMAM (2019) Marker assisted selection: Biotechnology tool for rice molecular breeding. J Biotechnol Phytochem 3(1)
Wu Z, Yang Y, Huang G, Lin J, Xia Y, Zhu Y (2017) Cotton functional genomics reveals global insight into genome evolution and fiber development. J Genet Genomics 44(11):511–518
Xiong D, Wang H, Chen M, Xue C, Li Z, Bian Y, Bao D (2014) Application of mating type genes in molecular marker-assisted breeding of the edible straw mushroom Volvariella volvacea. Scientia Hortic 180:59–62
Xu C, Wang Y, Yu Y, Duan J, Liao Z, Xiong G, Meng X, Liu G, Qian Q, Li J (2012) Degradation of MONOCULM1 by APC/C(TAD1) regulates rice tillering. Nat Commun 3:750
Xue Y, Li J, Xu Z (2003) Recent highlights of the China rice functional genomics program. Trends Genet 19(7):390–394
Xue Y, Jiang J, Yang X, Jiang H, Du Y, Liu X, Xie R, Chai Y (2020) Genome-wide mining and comparative analysis of fatty acid elongase gene family in Brassica napus and its progenitors. Gene 747:144674
Yagi M, Shirasawa K, Hirakawa H, Isobe S, Matsuno J, Uno Y, Tanase K, Onozaki T, Yamaguchi H (2020) QTL analysis for flowering time in carnation (Dianthus caryophyllus L.). Scientia Hortic 262:109053
Yan SM, McCoy R (2020) Archaic hominin genomics provides a window into gene expression evolution. 2020. Curr Opin Genet Dev 62:44–49
Yang X, Leebens-Mack J, Chen F, Yin Y (2015) Plant comparative and functional genomics. Int J Genomics Article ID 924369:2 pages
Yang M-Y, Chen J-Q, Tian H-Y, Ni C-Y, Xiao K (2019) TaARR1, a cytokinin response regulator gene in Triticum aestivum, is essential in plant N starvation tolerance via regulating the N acquisition and N assimilation. J Integr Agric 18(12):2691–2702
Yang W, Chen S, Chen Y, Zhang N, Ma Y, Wang W, Tian H, Li Y, Hussain S, Wang S (2020) Cell wall/vacuolar inhibitor of fructosidase 1 regulates ABA response and salt tolerance in Arabidopsis. Plant Signal Behav 15(4):1744293
Yin H, Chen CJ, Yang J, Weston DJ, Chen J-G, Muchero W, Ye N, Tschaplinski TJ, Wullschleger SD, Cheng Z-M, Tuskan GA, Yang X (2014) Functional genomics of drought tolerance in bioenergy crops. Crit Rev Plant Sci 33(2–3):205–224
Youssef HM, Eggert K, Koppolu R, Alqudah AM, Poursarebani N, Fazeli A, Sakuma S, Tagiri A, Rutten T, Govind G, Lundqvist U, Graner A, Komatsuda T, Sreenivasulu N, Schnurbusch T (2017) VRS2 regulates hormone-mediated inflorescence patterning in barley. Nat Genet 49(1):157–161
Yu J, Miao J, Zhang Z, Xiong H, Zhu X, Sun X, Pan Y, Liang Y, Zhang Q, Rashid MAR, Li J, Zhang H, Li Z (2018) Alternative splicing of OsLF3b controls grain length and yield in japonica rice. Plant Biotechnol J 16:1667–1678
Yuan H, Qin P, Hu L, Zhan S, Wang S, Gao P, Li J, Jin M, Xu Z, Gao Q, Du A, Tu B, Chen W, Ma B, Wang Y, Li S (2019) OsSPL18 controls grain weight and grain number in rice. J Genet Genom 46:41–51
Yuan L, Dai H, Zheng S, Huan R, Tong H-R (2020) Genome-wide identification of the HDAC family proteins and functional characterization of CsHD2C, a HD2-type histone deacetylase gene in tea plant (Camellia sinensis L. O. Kuntze). Plant Physiol Biochem. https://doi.org/10.1016/j.plaphy.2020.07.047
Yue GH, Sun F, Liu P (2013) Status of molecular breeding for improving Jatropha curcas and biodiesel. Renew Susta Energ Rev 26:332–343
Zeng Z-Q, Lin T-Z, Zhao J-Y, Zheng T-H, Xu L-F, Wang Y-H, Liu L-L, Jiang L, Chen S-H, Wan J-M (2020) OsHemA gene, encoding glutamyl-tRNA reductase (GlutTR) is essential for chlorophyll biosynthesis in rice (Oryza sativa). J Integr Agric 19(3):612–623
Zhang Y, Yu H, Yang X, Li Q, Ling J, Wang H, Gu X, Huang S, Jiang W (2016) CsWRKY46, a WRKY transcription factor from cucumber, confers cold resistance in transgenic-plant by regulating a set of cold-stress responsive genes in an ABA-dependent manner. Plant Physiol Biochem 108:478–487
Zhang H, Zhang J, Lang Z, Botella JR, Zhu JK (2017) Genome editing- Principles and applications for functional genomics, research and crop improvement. Crit Rev Plant Sci 36(4):291–309
Zhang L, Kong H, Ma H, Yang J (2018) Phylogenomic detection and functional prediction of genes potentially important for plant meiosis. Gene 643:83–97
Zhang Z, Feng X, Wang Y, Xu W, Huang K, Hu M, Zhang C, Yuan H (2019) Advances in research on functional genes of tea plant. Gene 711:143940
Zhao H-B, Jia H-M, Wang Y, Wang G-Y, Zhou C-C, Jia H-J, Gao Z-S (2019) Genome-wide identification and analysis of the MADS-box gene family and its potential role in fruit development and ripening in red bayberry (Morella rubra). Gene 717:144045
Zhou F, Lin Q, Zhu L, Ren Y, Zhou K, Shabek N, Wu F, Mao H, Dong W, Gan L (2013) D14-SCFD3-dependent degradation of D53 regulates strigolactone signaling. Nature 504:406–410
Zhou B, Lin JZ, Peng D, Yang YZ, Guo M, Tang DY, Tan X, Liu XM (2017) Plant architecture and grain yield are regulated by the novel DHHC-type zinc finger protein genes in rice (Oryza sativa L.). Plant Sci 254:12–21
Zhu H, Lv J, Zhao L, Tong X, Zhou B, Zhang T, Guo W (2012) Molecular evolution and phylogenetic analysis of geens related to cotton fibers development from wild and domesticated cotton species in Gossypium. Mol Phylogenet Evol 63(3):589–597
Zhu T, Xin F, Wei S-W, Liu Y, Han Y-C, Xie J, Ding Q, Ma L (2019) Genome-wide identification, phylogeny and expression profiling of class II peroxidases gene family in Brachypodium distachyon. Gene 700:149–162
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Shahrajabian, M.H., Sun, W. & Cheng, Q. Molecular breeding and the impacts of some important genes families on agronomic traits, a review. Genet Resour Crop Evol 68, 1709–1730 (2021). https://doi.org/10.1007/s10722-021-01148-x
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DOI: https://doi.org/10.1007/s10722-021-01148-x