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Impacts of application of calcium cyanamide and the consequent increase in soil pH on N2O emissions and soil bacterial community compositions

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Abstract

Calcium cyanamide, a component of lime-N, is gradually hydrolyzed into urea in soil and generates dicyandiamide, a nitrification inhibitor. Calcium cyanamide also increases soil pH. In this study, we determined the effects of calcium cyanamide application and the consequent increase in soil pH on N2O emissions and soil bacterial community composition. Five fertilizers (i.e., urea (U), cyanamide (CN), calcium cyanamide (CaCN), calcium hydroxide (Ca), and urea plus calcium hydroxide (CaU)) were applied using two methods (i.e., whole mixing and local placement in the mid layer) in a soil microcosm experiment. The control (CT) was left unfertilized. Compared with the U treatment, the CN, CaCN, and CaU treatments significantly suppressed N2O emissions. Fertilizer placement had less of an effect on N2O emissions. On day 7 after fertilizer application, soil bacterial alpha diversity indices were reduced in the CaCN, CN, and CaU treatments, and Planococcaceae was the dominant bacterial family. Compared with the bacterial communities in the other treatments, those in the CaCN, CN, and CaU treatments were predicted to contain fewer nitrification and denitrification genes. The soil bacterial community composition gradually shifted from that in CT as the soil pH increased. Our results suggest that, apart from the nitrification inhibitor effect of cyanamide, shaping the bacterial community compositions by the increase in soil pH under high urea concentrations could play an essential role in suppressing N2O emissions from soil.

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Data availability

The nucleotide sequence data reported are available in the DDBJ Sequence Read Archive under the accession number DRA010269.

References

  • Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet C, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope E, Da Silva R, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley G, Janssen S, Jarmusch AK, Jiang L, Kaehler B, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MG, Lee J, Ley R, Liu Y, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton J, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS II, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CH, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG (2019) Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nat Biotechnol 37:852–857

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Callahan BJ, McMurdie PJ, Rosen MJ, Han AW, Johnson AJA, Holmes SP (2016) DADA2: high resolution sample inference from Illumina amplicon data. Nat Methods 13:581–583

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Lozupone CA, Turnbaugh PJ, Noah Fierer N, King R (2011) Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc Natl Acad Sci U S A 108:4516–4522

    Article  CAS  PubMed  Google Scholar 

  • Carneiro J, Cardenas LM, Hatch DJ, Trinade H, Scholefield D, Clegg CD, Hobbs P (2010) Effect of the nitrification inhibitor dicyandiamide on microbial communities and N2O from an arable soil fertilized with ammonium sulphate. Environ Chem Lett 8:237–246

    Article  CAS  Google Scholar 

  • Cassman NA, Soares JR, Pijl A, Lourenco KS, van Veen JA, Cantarella H, Kuramae EE (2019) Nitrification inhibitors effectively target N2O-producing Nitrosospira spp. in tropical soil. Environ Microbiol 21:1241–1254

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Dai Y, Di HJ, Cameron KC, He J (2013) Effects of nitrogen application rate and a nitrification inhibitor dicyandiamide on ammonia oxidizers and N2O emissions in a grazed pasture soil. Sci Total Environ 465:125–135

    Article  CAS  PubMed  Google Scholar 

  • Dong XX, Zhang LL, Wu ZJ, Li DP, Shang ZC, Gong P (2013) Effects of the nitrification inhibitor DMPP on soil bacterial community in a Cambisol in Northeast China. J Soil Sci Plant Nutr 13:580–591

    Google Scholar 

  • Fu Q, Abadie M, Blaud A, Carswell A, Misselbrook TH, Clark IM, Hirsch PR (2020) Effects of urease and nitrification inhibitors on soil N, nitrifier abundance and activity in a sandy loam soil. Biol Fertil Soils 56:185–194

    Article  CAS  PubMed  Google Scholar 

  • Garcia-Marco S, Abalos D, Espejo R, Vallejo A, Mariscal-Sancho I (2016) No tillage and liming reduce greenhouse gas emissions from poorly drained agricultural soils in Mediterranean regions. Sci Total Environ 566–567:512–520

    Article  PubMed  CAS  Google Scholar 

  • Hatano S, Fujita Y, Nagumo Y, Ohtake N, Sueyoshi K, Takahashi Y, Sato T, Tanabata S, Higuchi K, Saito A, Ohyama T (2019) Effect of the nitrification inhibitor 3,4–dimethylpyrazole phosphate on the deep placement of nitrogen fertilizers for soybean cultivation. Int J Agron 2019:9724214

  • Ivanov V, Chu J (2008) Applications of microorganisms to geotechnical engineering for bioclogging and biocementation of soil in situ. Rev Environ Sci Biotechnol 7:139–153

    Article  CAS  Google Scholar 

  • Jha N, Palmada T, Berben P, Saggar S, Luo J, McMillan AMS (2020) Influence of liming-induced pH changes on nitrous oxide emission, nirS, nirK and nosZ gene abundance from applied cattle urine in allophanic and fluvial grazed pasture soils. Biol Fertil Soils 56:811–824

    Article  CAS  Google Scholar 

  • Jung D, Biggs H, Erikson J, Ledyard PU (1975) New colorimetric reaction for end-point, continuous-flow, and kinetic measurement of urea. Clin Chem 21:1136–1140

    Article  CAS  PubMed  Google Scholar 

  • Keeney DR, Welson DW (1982) Nitrogen-inorganic forms. In: Page AL, Miller RH, Keeney (Eds.) Methods of soil analysis, Part 2: Chemical and microbiological methods, 2nd edn. Agronomy Series, No. 9, Amer Soc Agron, Soil Sci Soc Am, Madison, WI, pp 672–676

  • Kim HJ, Eom HJ, Park C, Jung J, Shin B, Kim W, Chung N, Choi IG, Park W (2016) Calcium carbonate precipitation by Bacillus and Sporosarcina strains isolated from concrete and analysis of the bacterial community of concrete. J Microbiol Biotechnol 26:540–548

    Article  CAS  PubMed  Google Scholar 

  • Langille MGI, Zaneveld J, Caporaso JG, McDonald D, Knights D, Reyes JA, Clemente JC, Burkepile DE, Vega Thurber RL, Knight R, Beiko RG, Huttenhower C (2013) Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat Biotechnol 31:814–821

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Lauber CL, Hamady M, Knight R, Fierer N (2009) Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale. Appl Environ Microbiol 75:5111–5120

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Li H, Liang X, Chen Y, Lian Y, Tian G, Ni W (2008) Effect of nitrification inhibitor DMPP on nitrogen leaching, nitrifying organisms, and enzyme activities in a rice–oilseed rape cropping system. J Environ Sci 20:149–155

    Article  CAS  Google Scholar 

  • Liu B, Mørkved PT, Frostegård A, Bakken LR (2010) Denitrification gene pools, transcription and kinetics of NO, N2O and N2 production as affected by soil pH. FEMS Microbiol Ecol 72:407–417

    Article  CAS  PubMed  Google Scholar 

  • Ma B, Lv X, Gai Y, Chang SX, Dyck MF (2018) Liming does not counteract the influence of long-term fertilization on soil bacterial community structure and its co-occurrence pattern. Soil Biol Biochem 123:45–53

    Article  CAS  Google Scholar 

  • Mou S, Wang H, Sun Q (1993) Simultaneous determination of the three main inorganic forms of nitrogen by ion chromatography. J Chromatogr A 640:161–165

    Article  CAS  Google Scholar 

  • Mukumbuta I, Uchida Y, Hatano R (2018) Ecaluating the effect of liming on N2O fluxes from denitrification in an andosol using the acetylene inhibition and 15N isotope tracer methods. Biol Fertil Soils 54:71–81

    Article  CAS  Google Scholar 

  • O’Callaghan M, Gerard EM, Carter PE, Larnder R, Sarathchandra U, Burch G, Ghani A, Bell N (2010) Effect of the nitrification inhibitor dicyandiamide (DCD) on microbial communities in a pasture soil amended with bovine urine. Soil Biol Biochem 42:1425–1436

    Article  CAS  Google Scholar 

  • Obia A, Cornelissen G, Mulder J, Dorsch P (2015) Effect of soil pH increase by biochar on NO, N2O and N2 production during denitrification in acid soils. PLoS One 10:e0138781

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Patra DD, Kiran U, Pande P (2006) Urease and nitrification retardation properties in natural essential oils and their by–products. Comm Soil Sci Plant Anal 37:1663–1673

    Article  CAS  Google Scholar 

  • Qu Z, Wang J, Almøy T, Bakken LR (2014) Excessive use of nitrogen in Chinese agriculture results in high N2O/(N2O+N2) product ratio of denitrification, primarily due to acidification of the soils. Glob Chang Biol 20:1685–1698

    Article  PubMed  PubMed Central  Google Scholar 

  • Rousk J, Baath E, Brookes PC, Lauber CL, Lozupone C, Caporaso JG, Knight R, Fierer N (2010) Soil bacterial and fungal communities across a pH gradient in an arable soil. ISME J 4:1340–1351

    Article  PubMed  Google Scholar 

  • Ruser R, Schulz R (2015) The effect of nitrification inhibitors on the nitrous oxide (N2O) release from agricultural soils–a review. J Plant Nutr Soil Sci 178:171–188

    Article  CAS  Google Scholar 

  • Shaaban M, Peng QA, Hu R, Wu Y, Lin S, Zhao J (2015) Dolomite application to acidic soils: a promising option for mitigating N2O emissions. Environ Sci Pollut Res 22:19961–19970

    Article  CAS  Google Scholar 

  • Shi K, Wang L, Zhou YH, Yu YL, Yu JQ (2009) Effects of calcium cyanamide on soil microbial communities and Fusarium oxysporum f. sp. cucumberinum. Chemosphere 75:872–877

    Article  CAS  PubMed  Google Scholar 

  • Singh J, Saggar S, Giltrap DL, Bolan NS (2008) Decomposition of dicyandiamide (DCD) in three contrasting soils and its effect on nitrous oxide emission, soil respiratory activity, and microbial biomass—an incubation study. Aust J Soil Res 46:517–525

    Article  CAS  Google Scholar 

  • Singh BK, Nunan N, Millard P (2009) Response of fungal, bacterial and ureolytic communities to synthetic sheep urine deposition in a grassland soil. FEMS Microbiol Ecol 70:109–117

  • Soares JR, Cassman NA, Kielak AM, Pijl A, Carmo JB, Lourenço KS, Laanbroek HJ, Cantarella H, Kuramae EE (2016) Nitrous oxide emission related to ammonia-oxidizing bacteria and mitigation options from N fertilization in a tropical soil. Sci Rep 6:30349

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Subbarao GV, Ito O, Sahrawat KL, Berry WL, Nakahara K, Ishikawa T, Watanabe T, Suenaga K, Rondon M, Rao IM (2006) Scope and strategies for regulation of nitrification in agricultural systems—challenges and opportunities. Crit Rev Plant Sci 25:303–335

    Article  CAS  Google Scholar 

  • Syakila A, Kroeze C (2011) The global nitrous oxide budget revisited. Greenh Gas Meas Manag 1:17–26

    Article  CAS  Google Scholar 

  • Takahashi Y, Chinushi T, Nagumo Y, Nakano T, Ohyama T (1991) Effect of deep placement of controlled release nitrogen fertilizer (coated urea) on growth, yield, and nitrogen fixation of soybean plants. Soil Sci Plant Nutr 37:223–231

    Article  Google Scholar 

  • Takahashi Y, Chinushi T, Nakano T, Ohyama T (1992) Evaluation of N2 fixation and N absorption activity by relative ureide method in field–grown soybean plants with deep placement of coated urea. Soil Sci Plant Nutr 38:699–708

    Article  CAS  Google Scholar 

  • Tang J, Tang X, Qin Y, He Q, Yi Y, Ji Z (2019) Karst rocky desertification progress: soil calcium as a possible driving force. Sci Total Environ 649:1250–1259

    Article  CAS  PubMed  Google Scholar 

  • Tewari K, Suganuma T, Fujikake H, Ohtake N, Sueyoshi K, Takahashi Y, Ohyama T (2002) Effect of deep placement of calcium cyanamide, coated urea, and urea on soybean (Glycine max (L.) Merr.) seed yield in relation to different inoculation methods. Soil Sci Plant Nutr 48:855–863

    Article  Google Scholar 

  • Thomson AJ, Giannopoulos G, Pretty J, Baggs EM, Richardson DJ (2012) Biological sources and sinks of nitrous oxide and strategies to mitigate emissions. Phil Trans R Soc Lond B Biol Sci 367:1157–1168

    Article  CAS  Google Scholar 

  • Wang Y, Guo J, Vogt RD, Mulder J, Wang J, Zhang X (2018) Soil pH as the chief modifier for regional nitrous oxide emissions: new evidence and implications for global estimates and mitigation. Glob Change Biol 24:e617–e626

    Article  Google Scholar 

  • Wu Y, Wu J, Ma Y, Lian Y, Sun H, Xie D, Li Y, Brookes PC, Yao H (2019) Dynamic changes in soil chemical properties and microbial community structure in response to different nitrogen fertilizers in an acidified celery soil. Soil Ecol Lett 1:105–113

    Article  Google Scholar 

  • Yamamoto A, Akiyama H, Naokawa T, Yagi K (2012) Effect of lime–nitrogen application on N2O emission from an andosol vegetable field. Soil Sci Plant Nutr 58:245–254

    Article  CAS  Google Scholar 

  • Yamamoto A, Akiyama H, Naokawa T, Miyazaki Y, Honda Y, Sano Y, Nakajima Y, Yagi K (2014) Lime–nitrogen application affects nitrification, denitrification, and N2O emission in an acidic tea soil. Biol Fertil Soils 50:53–62

    Article  CAS  Google Scholar 

  • Zhu G, Ju X, Zhang J, Muller C, Rees RM, Thorman RE, Sylvester-Bradley R (2019) Effects of the nitrification inhibitor DMPP (3,4-dimethylpyrazole phosphate) on gross N transformation rates and N2O emissions. Biol Fertil Soils 55:603–615

    Article  CAS  Google Scholar 

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Correspondence to Kazuki Suzuki.

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Suzuki, K., Kashiwa, N., Nomura, K. et al. Impacts of application of calcium cyanamide and the consequent increase in soil pH on N2O emissions and soil bacterial community compositions. Biol Fertil Soils 57, 269–279 (2021). https://doi.org/10.1007/s00374-020-01523-3

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