Skip to main content
Log in

Phylogeny and Differentiation of Sibling-Species Sicista of the Group Betulina (Rodentia, Dipodoidea): Results of Analysis of a Fragment of the IRBP Gene of Nuclear DNA Variability

  • GENETICS
  • Published:
Biology Bulletin Aims and scope Submit manuscript

Abstract

Results of the analysis of IRBP (interphotoreceptor retinoid-binding protein) nuclear DNA gene variability in birch mice of the genus Sicista reflect monophyly of the betulina group and confirm the substantial genetic isolation of the sibling species S. betulina and S. strandi within this group. Using Tamura’s 3‑parameter model T92, it is shown that the mean genetic distances between S. betulina and S. strandi are 0.7%, comparable to the interspecific genetic distances for sibling species from other groups of birch mice. Their intraspecific differentiation, which is particularly well-expressed in S. strandi, is also identified. Differentiation between the northern and southern populations of S. strandi, comparable to the interspecific differences (D = 0.8%), and isolation of the Carpathian specimen of S. betulina from other European and Siberian sample sets (D = 0.2%) are shown.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1.

Similar content being viewed by others

REFERENCES

  1. Baskevich, M.I., About morphologically similar species in the genus Sicista,Bonn. Zool. Beitrage, 1996, vol. 46, nos. 1–2, pp. 133–140.

    Google Scholar 

  2. Baskevich, M.I. and Okulova, N.M., Comparative karyology and craniology of birch mice (Sicista, Dipodoidea, Rodentia) of the betulina group, Zool. Zh., 2003, vol. 82, no. 8, pp. 996–1009.

    Google Scholar 

  3. Baskevich, M.I. and Oparin, M.L., On new finding of the birth mouse Sicista strandi (Rodentia, Dipodoidea) specifying the northeastern boundary of the species range, Zool. Zh., 2000, vol. 79, no. 7, pp. 1133–1136.

    Google Scholar 

  4. Baskevich, M.I., Okulova, N.M., Vlasov, A.A., and Oparin, M.L., Chromosomal and craniometric variability in the Strand’s mouse Sicista strandi (Rodentia, Dipodoidea) in the Caucasus and the Russian Plain, in Mlekopitayushchie gornykh territorii (Mammals of Mountainous Areas), Rozhnov, V.V., Tembotova, F.A., Ed., Moscow: KMK, 2005a, pp. 18–23.

  5. Baskevich, M.I., Okulova, N.M., Potapov, S.G., Illarionova, N.A., Krysanov, E.Yu., Shchipanov, N.A., Oparin, M.L., and Vlasov, A.A., On the diagnosis and distribution of sibling species of birch mice (Rodentia, Dipodoidea, Sicista) on the territory of the Russian Plain and the Caucasus, Tr. Zool. Inst. Ross. Akad. Nauk, 2005b, vol. 360, pp. 22–40.

    Google Scholar 

  6. Baskevich, M.I., Potapov, S.G., and Mironova, T.A., Cryptic species of rodents of the Caucasus as a model in the study of problems of species and speciation, Zh. Obshch. Biol., 2015, vol. 75, no. 4, pp. 333–349.

    Google Scholar 

  7. Baskevich, M.I., Bogdanov, A.S., and Khlyap, L.A., Taxonomy and phylogeny of sibling-species Sicista of the group caucasica and their position in the genus Sicista (Rodentia, Dipodoidea) according to sequencing of the IRBP gene fragment of nuclear DNA, Biol. Bull. (Moscow), 2018a, vol. 45, no. 5, pp. 476–481.

    Article  Google Scholar 

  8. Baskevich, M.I., Bogdanov, A.S., Potapov, S.G., Okulova, N.M., Oparin, M.L., Khlyap, L.A., Vlasov, A.A., and Stakheev, V.V., Chromosomal, molecular, and craniometric approaches to the study of the population genetic structure of the Srtand’s birth mouse Sicista strandi (Rodentia, Dipodoidea), in Mater. XX Mezhdunar. konf. “Biologicheskoe raznoobrazie Kavkaza i yuga Rossii” (Makhachkala, 7–9 noyabrya 2018 g.) (Proc. XX Int. Conf. “Biological Diversity of the Caucasus and the South of Russia” (Makhachkala, November 7–9, 2018)), Makhachkala: Inst. Probl. Ekol. Resp. Dagestan, 2018b, pp. 365–367.

  9. Baskevich, M.I., Khlyap, L.A., Potapov, S.G., Shvarts, E.A., Dmitriev, S.G., and Malygin, V.M., Evolutionary and ecological aspects of genetic variability in populations of Sicista betulina (Rodentia, Dipodoidea) from Valdai Hills, 1778, Biol. Bull. (Moscow), 2019, vol. 46, no. 10, pp. 1256–1260.

    Article  Google Scholar 

  10. Bystrakova, N.V., Taxonomic and genetic diversity of small mammals of the Middle Volga region, Extended Abstract of Cand. Sci. (Biol.) Dissertation, 2000.

  11. Cserkész, T., Aczél-Fridrich, Z., Hegyeli, Z., Sugár, S., Czabán, D., Horváth, O., and Sramkó, G., Rediscovery of the Hungarian birch mouse (Sicista subtilis trizona) in Transylvania (Romania) with molecular characterisation of its phylogenetic affinities, Mammalia, 2015, vol. 79, no. 2, pp. 215–224.

    Google Scholar 

  12. Cserkész, T., Rusin, M., and Shramko, G., An integrative systematic revision of the European southern birch mice (Rodentia, Sminthidae, Sicista subtilis group), Mamm. Rev., 2016, vol. 46, pp. 114–130.

    Article  Google Scholar 

  13. Cserkész, T., Fulop, A., Almerekova, Sh., Kondor, T., Levente, L., and Shramko, G., Phylogenetic and morphological analysis of birch mice (genus Sicista, family Smintidae, Rodentia) in the Kazak Gradle with description of a new species, J. Mamm. Evol., 2019, vol. 26, no. 1, pp. 147–163.

    Article  Google Scholar 

  14. DeBry, R.W. and Sagel, R.W., Phylogeny of Rodentia (Mammalia) inferred from the nuclear-encoded gene IRBP,Mol. Phyl. Evol., 2001, vol. 19, pp. 290–301.

    Article  CAS  Google Scholar 

  15. Fedyk, S., Chetnicki, W., Ruprecht, A.L., and Cichocki, J., Chromosome polymorphism in polish populations of Northern birch mouse Sicista betulina, Fol.Zool., 2011, vol. 60, no. 1, pp. 31–36.

    Google Scholar 

  16. Gromov, I.M. and Erbaeva, M.A., Mlekopitayushchie fauny Rossii i sopredel’nykh territorii. Zaitseobraznye i gryzuny (Mammals of Russia and Adjacent Countries. Lagomorphs and Rodents), St. Petersburg: Ross. Akad. Nauk, 1995.

  17. Jancewicz, E. and Falkowska, E., Glacial refugia in Europe: what do we know about the history of contemporary plant and animal species, SYLWAN, 2017, vol. 161, no. 12, pp. 982–990.

    Google Scholar 

  18. Jansa, Sh.A. and Weksler, M., Phylogeny of muroid rodents: relationships within and among major lineages as determined by IRBP gene sequences, Mol. Phyl. Evol., 2004, vol. 31, no. 1, pp. 256–276.

    Article  CAS  Google Scholar 

  19. Kovalskaya, Y.M., Aniskin, V.M., Bogomolov, P.L., Surov, A.V., Tikhonov, I.A., Tikhonova, G.N., Robinson, T.J., and Volobuev, V.T., Karyotype reorganization in the subtilis group of birch mice (Rodentia, Dipodidae, Sicista): unexpected taxonomic diversity within a limited distribution, Cytogenet. Genome Res., 2011, vol. 132, no. 4, pp. 271–288.

    Article  CAS  PubMed  Google Scholar 

  20. Lebedev, V.S., Bannikova, A.A., Pages, M., Pisano, J., Michaux, J.R., and Shenbrot, G.I., Molecular phylogeny and systematics of Dipodoidea: a test of morphology-based hypotheses, Zool. Scr., 2013, vol. 42, no. 3, pp. 231–249.

    Article  Google Scholar 

  21. Ognev, S.I., Zveri SSSR i prilezhashchikh stran. Gryzuny (Animals of the USSR and Adjacent Countries. Rodents), Moscow: Akad. Nauk SSSR, 1948, vol. 6.

  22. Pisano, J., Condamine, FI., Lebedev, V., Bannikova, A., Quere, J.-P., Shenbrot, G.I., Pages, M., and Michaux, J.R., Out of Hymalaya: the impact of past Asian environmental changes on the evolutionary and biographical history of Dipodoidea (Rodentia), J. Biogeogr., 2015, vol. 42, no. 5, pp. 856–870.

  23. Pucek, Zd., Family Zapodidae, in Handbuch der Saugetiere Europas, Weisbaden: Acad. Verlag, 1982, pt. 2/1, pp. 497–538.

  24. Rusin, M., Lebedev, V., Matrosova, V., Zemlemerova, E., Lopatina, N., and Bannikova, A., Hidden diversity in the Caucasian mountains: an example of birch mice (Rodentia, Sminthidae, Sicista), Hystrix, Ital.J. Mamm., 2018, vol. 29, pp. 61–66.

    Google Scholar 

  25. Sambrook, J., Fritsch, E.F., and Maniatis, T., Molecular Cloning: A Laboratory Manual, New York: Cold Spring Harbor Lab. Press, 1989.

    Google Scholar 

  26. Shenbrot, G.I., Sokolov, V.E., Geptner, V.G., and Koval’skaya, Yu.M., Dipodidae, in Mlekopitayushchie Rossii i sopredel’nykh regionov (Mammals of Russia and Adjacent Regions), Sokolov, V.E., Ed., Moscow: Nauka, 1995.

  27. Sokolov, V.E. and Baskevich, M.I., A new species of unstriped birch mice (Rodentia, Dipodoidea) from the Lesser Caucasus, Zool. Zh., 1988, vol. 67, no. 2, pp. 300–304.

    Google Scholar 

  28. Sokolov, V.E. and Koval’skaya, Yu.M., The system of the genus Sicista and chromosome forms of the Tien Shan mouse, S. tiancshanica Salensky, 1903, in V S’’ezd Vsesoyuznogo teriologicheskogo o-va (Moskva, 29 yanv.–2 fevr.1990 g.), Tezisy dokladov (V Congr. All-Union Theriol. Soc. (Moscow, January 29–February 2, 1990), Abstracts of Papers), Moscow: Akad. Nauk SSSR, 1990, part 1, pp. 99–100.

  29. Sokolov, V.E., Baskevich, M.I., and Koval’skaya, Yu.M., Revision of unstriped birch mice of the Caucasus: sibling species of Sicista caucasica Vinigradov, 1925 and S. kluchorica sp.n. (Rodentia, Dipodidae), Zool. Zh., 1981, vol. 60, no. 9, pp. 1386–1393.

    Google Scholar 

  30. Sokolov, V.E., Baskevich, M.I., and Koval’skaya, Yu.M., Sicista kazbegica sp.n. (Rodentia, Dipodidae) from the basin of the upper reaches of the Terek River, Zool. Zh., 1986a, vol. 65, no. 6, pp. 949–952.

    Google Scholar 

  31. Sokolov, V.E., Baskevich, M.I., and Koval’skaya, Yu.M., Variability of the karyotype of the steppe birch mouse Sicista subtilis Pallas (1778) and justification of the species independence of S. severtzovi Ognev, 1935 (Rodentia, Zapodidae), Zool. Zh., 1986b, vol. 65, no. 8, pp. 1684–1692.

    Google Scholar 

  32. Sokolov, V.E., Koval’skaya, Yu.M., and Baskevich, M.I., On the species independence of the Strand’s birth mouse, S. strandi Formosov (Rodentia, Dipodoidea), Zool. Zh., 1989, vol. 68, no. 10, pp. 95–106.

    Google Scholar 

  33. Tamura, K., Stecher, G., Peterson, D., Filipski, A., and Kumar, S., MEGA6: Molecular Evolutionary Genetics Analysis version 6.0, Mol. Biol. Evol., 2013, vol. 30, no. 12, pp. 2725–2729.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  34. Vinogradov, B.S., Dipodoidea, in Fauna SSSR. Mlekopitayushchie (Fauna of the USSR. Mammals), Shtakel’berg, A.A., Ed., Moscow: Akad. Nauk SSSR, 1937, vol. 3 (4).

  35. Zhang, Q., Xia, L., Kimura, Y., Shenbrot, G., Zhang, Z., Ge, D., and Yang, Q., Tracing the origin and diversification of Dipodoidea (order: Rodentia): evidence from fossil record and molecular phylogeny, Evol. Biol., 2013, vol. 40, no. 1, pp. 32–44.

    Article  CAS  Google Scholar 

Download references

Funding

This study was conducted as part of a State Assignment, project nos. 0108-2019-0007 and 0109-2018-0073.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to M. I. Baskevich.

Ethics declarations

Conflict of interest. The authors declare that they have no conflict of interest.

Statement on the welfare of animals. All applicable international, national, and/or institutional guidelines for the care and use of animals were followed.

Additional information

Translated by A. Lisenkova

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Baskevich, M.I., Bogdanov, A.S., Khlyap, L.A. et al. Phylogeny and Differentiation of Sibling-Species Sicista of the Group Betulina (Rodentia, Dipodoidea): Results of Analysis of a Fragment of the IRBP Gene of Nuclear DNA Variability. Biol Bull Russ Acad Sci 47, 482–489 (2020). https://doi.org/10.1134/S1062359020050027

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S1062359020050027

Navigation