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Complete Mitochondrial Genome of Parabotia bimaculata (Cypriniformes: Cobitidae: Botiinae), an Endemic Riverine Loach in China and Phylogenetic Analysis for Botiinae

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Abstract

Parabotia bimaculata is a common small-bodied endemic riverine loach in China. There was still no relevant genetic information for P. bimaculata. Here, we reported that the complete mitochondrial genome of P. bimaculata was a circular molecule of 16,588 bp in length, with two rRNA genes, 13 protein-coding genes, 22 tRNA genes, and a control region (D-loop). The gene composition and the structural arrangement were identical to the other Parabotia species and most of other teleosts. The nucleotide acid composition of the entire mitogenome was 30.8% for A, 27.9% for C, 16.1% for G, and 25.3% for T, with an A + T content of 56.1%. Phylogenetic analyses placed P. bimaculata in a well-supported monophyletic cluster with the other three Parabotia species in Botiidae.

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Authors and Affiliations

  1. Chongqing Key Laboratory of Animal Biology, School of Life Sciences, Chongqing Normal University, Chongqing, 401331, China

    Yanjun Shen

  2. Changjiang Institute of Survey, Planning, Design and Research, Wuhan, 430010, China

    Jian Wang

  3. College of Environmental Science and Engineering; Southwest Branch of the National Freshwater Fishery Engineering Technology Research Center (Wuhan), China West Normal University, Nanchong, 637009, Sichuan Province, China

    Fubin Zhang

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  1. Yanjun Shen
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  2. Jian Wang
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  3. Fubin Zhang
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Correspondence to Yanjun Shen or Fubin Zhang.

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Table S1

Primers used for determination of the Parabotia bimaculata mitogenome. (DOCX 18 kb)

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Shen, Y., Wang, J. & Zhang, F. Complete Mitochondrial Genome of Parabotia bimaculata (Cypriniformes: Cobitidae: Botiinae), an Endemic Riverine Loach in China and Phylogenetic Analysis for Botiinae. Thalassas 36, 387–393 (2020). https://doi.org/10.1007/s41208-020-00200-4

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  • DOI: https://doi.org/10.1007/s41208-020-00200-4

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