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Licensed Unlicensed Requires Authentication Published by De Gruyter September 7, 2020

Alternatives to the Kaplan–Meier estimator of progression-free survival

  • Jenny J Zhang , Zhuoxin Sun , Han Yuan and Molin Wang EMAIL logo

Abstract

Progression-free survival (PFS), defined as the time from randomization to progression of disease or death, has been indicated as an endpoint to support accelerated approval of certain cancer drugs by the U.S. FDA. The standard Kaplan–Meier (KM) estimator of PFS, however, can result in significantly biased estimates. A major source for the bias results from the substitution of censored progression times with death times. Currently, to ameliorate this bias, several sensitivity analyses based on rather arbitrary definitions of PFS censoring are usually conducted. In addition, especially in the advanced cancer setting, patients with censored progression and observed death times have the potential to experience disease progression between those two times, in which case their true PFS time is actually between those times. In this paper, we present two alternative nonparametric estimators of PFS, which statistically incorporate survival data often available for those patients who are censored with respect to progression to obtain less biased estimates. Through extensive simulations, we show that these estimators greatly reduce the bias of the standard KM estimator and can also be utilized as alternative sensitivity analyses with a solid statistical basis in lieu of the arbitrarily defined analyses currently used. An example is also given using an ECOG-ACRIN Cancer Research Group advanced breast cancer study.


Corresponding author: Molin Wang, Departments of Biostatistics and Epidemiology, Harvard T.H. Chan School of Public Health, 655 Huntington Avenue, Building 2, Boston, MA 02115, USA; and Harvard Medical School, and Brigham Women’s Hospital, Boston, MA 02115, USA, E-mail:

Jenny J Zhang and Zhuoxin Sun contributed equally to this work.


Award Identifier / Grant number: CA-75362

Funding source: United States National Institute of Health Cancer Training Grant

Acknowledgments

The authors thank the patients, physicians, nurses, and data managers who participated in the ECOG-ACRIN trial E2100. They further acknowledge support from the United States National Cancer Institute (CA-75362) and the United States National Institute of Health Cancer Training Grant (Jenny J. Zhang). They express their gratitude to Richard Gelber, Robert Gray, and Ann Partridge for their assistance throughout. They also thank the editor and referees for their insightful comments and suggestions.

  1. Author contribution: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.

    Zhang and Sun contributed equally to this paper.

  2. Research funding: None declared.

  3. Conflict of interest statement: The authors declare no conflicts of interest regarding this article.

Appendix

Details for variance estimation of h in Section 2.3

Recall that l(h)=j=1k{l=1djlog[1q=r(j,l)+1j(1hq)1]+njlog(1hj)}, then

l(h)hυ=j=υk[l=1dj1(r(j,l)+1υj)×{q=r(j,l)+1j(1hq)1q=r(j,l)+1j(1hq)q[r(j,l)+1,j]:qυ(1hq)[q=r(j,l)+1j(1hq)]2}]nυ1hυ=j=υk[l=1dj1(r(j,l)+1υj)×{q[r(j,l)+1,j]:qυ(1hq)q=r(j,l)+1j(1hq)[1q=r(j,l)+1j(1hq)]}]nυ1hυ=j=υk[l=1dj1(r(j,l)+1υj){1(1hυ)[1q=r(j,l)+1j(1hq)]}]nυ1hυ
2lhhυ2=j=υk{l1dj1rj,l+1υj×1hυqrj,l+1,j:qυ1hq1q=rj,l+1j1hq1hυ1q=rj,l+1j1hq2}nυ(1hυ)=j=υk{l1dj1rj,l+1υj×1q=rj,l+1j1hqq=rj,l+1j1hq1hυ1q=rj,l+1j1hq2}nυ(1hυ)=j=υk{l1dj1rj,l+1υj×12q=rj,l+1j1hq1hυ1q=rj,l+1j1hq2}nυ(1hυ)
2l(h)hυhp=j=υk{l1dj1(r(j,l)+1υ,pj)[(1hυ)q[r(j,l)+1,j]:qp(1hq){(1hυ)[1q=r(j,l)+1j(1hq)]}2]}=j=υk{l1dj1(r(j,l)+1υ,pj)[q=r(j,l)+1j(1hq)(1hυ)(1hp)[1q=r(j,l)+1j(1hq)]2]}

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Received: 2019-08-21
Accepted: 2020-06-22
Published Online: 2020-09-07

© 2020 Walter de Gruyter GmbH, Berlin/Boston

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