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First report of the complete genomic sequences of strawberry mild yellow edge virus and strawberry vein banding virus isolated in Japan

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Abstract

Strawberry vein banding virus (SVBV) and strawberry mild yellow edge virus (SMYEV) have caused disease in strawberries for many years in Japan, but little is known about their molecular properties. We thus determined the complete genomic sequence of an isolate of each virus from Tochigi Prefecture. A nucleotide sequence analysis showed that SVBV is closely related to Chinese isolates, whereas SMYEV is closely related to German and Argentine isolates. This is the first report describing the complete genome sequences of SVBV and SMYEV isolated in Japan. Moreover, we constructed an infectious SMYEV clone, which induced mild yellowing on inoculated strawberry plants.

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Acknowledgements

Strawberry plants were provided and maintained by the Plant Pathology and Applied Entomology Laboratory of the Tochigi Prefectural Agricultural Experiment Station. This study was supported by a grant (27017A) to TN from the “Science and Technology Research Promotion Program for Agriculture, Forestry, Fisheries and Food Industry”. We thank Edanz Group (https://en-author-services.edanzgroup.com/) for editing a draft of this manuscript.

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Author notes

  1. Kiyoshi Namai

    Present address: Tochigi Agricultural College, Kamikomoriya-machi 1145-1, Utsunomiya, Tochigi, 321-3233, Japan

Authors and Affiliations

  1. School of Agriculture, Utsunomiya University, Mine-machi 350, Utsunomiya, Tochigi, 321-8505, Japan

    Yoshiaki Takamura, Satsuki Yamaryo, Wei-Qin Wang, Yutaro Neriya, Hisashi Nishigawa & Tomohide Natsuaki

  2. Tochigi Prefectural Agricultural Experiment Station, Kawaraya-cho 1080, Utsunomiya, Tochigi, 320-0002, Japan

    Emiko Suzuki & Kiyoshi Namai

  3. Department of Plant Pathology, The University of Agriculture, Peshawar, 25130, Khyber Pakhtunkhwa, Pakistan

    Asad Ali

Authors
  1. Yoshiaki Takamura
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  2. Satsuki Yamaryo
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  3. Wei-Qin Wang
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  4. Yutaro Neriya
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  8. Hisashi Nishigawa
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Correspondence to Yutaro Neriya.

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The DDBJ/EMBL/GenBank accession numbers for the SVBV-T, SMYEV-T1, and SMYEV-T2 sequences are LC315804, LC515235, and LC515236, respectively

Electronic supplementary material

Below is the link to the electronic supplementary material.

10327_2020_947_MOESM1_ESM.pptx

Neighbor-joining phylogenetic trees for a SVBV-T, other SVBV isolates, and CaMV (outgroup; accession NC_001497) based on the amino acid sequence encoded by ORF5 and for b, c SMYEV-T1, SMYEV-T2, and other SMYEV isolates based on the amino acid sequences encoded byb ORF1 and c ORF5. Numbers on branches are the bootstrap values (%) obtained for 1000 replicates. Only bootstrap values exceeding 60% are presented (PPTX 181 kb)

Supplementary file 2 (XLSX 21 kb)

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Takamura, Y., Yamaryo, S., Wang, WQ. et al. First report of the complete genomic sequences of strawberry mild yellow edge virus and strawberry vein banding virus isolated in Japan. J Gen Plant Pathol 86, 503–506 (2020). https://doi.org/10.1007/s10327-020-00947-x

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  • DOI: https://doi.org/10.1007/s10327-020-00947-x

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