Elsevier

Photoacoustics

Volume 19, September 2020, 100184
Photoacoustics

Research article
Evaluating online filtering algorithms to enhance dynamic multispectral optoacoustic tomography

https://doi.org/10.1016/j.pacs.2020.100184Get rights and content
Under a Creative Commons license
open access

Highlights

  • Simple α and αβ filters effectively suppress noise in dynamic spectral images.

  • A multispectral extension of the Shepp-Logan phantom was developed.

  • Practical application is demonstrated in distinct renal cell carcinoma models.

  • αβ filters enabled effective separation of gas breathing challenge response.

Abstract

Multispectral optoacoustic tomography (MSOT) is an emerging imaging modality, which is able to capture data at high spatiotemporal resolution using rapid tuning of the excitation laser wavelength. However, owing to the necessity of imaging one wavelength at a time to the exclusion of others, forming a complete multispectral image requires multiple excitations over time, which may introduce aliasing due to underlying spectral dynamics or noise in the data. In order to mitigate this limitation, we have applied kinematic α and αβ filters to multispectral time series, providing an estimate of the underlying multispectral image at every point in time throughout data acquisition. We demonstrate the efficacy of these methods in suppressing the inter-frame noise present in dynamic multispectral image time courses using a multispectral Shepp-Logan phantom and mice bearing distinct renal cell carcinoma tumors. The gains in signal to noise ratio provided by these filters enable higher-fidelity downstream analysis such as spectral unmixing and improved hypothesis testing in quantifying the onset of signal changes during an oxygen gas challenge.

Keywords

Photoacoustic imaging
Oxygen
Hemoglobin
Dynamic response
Noise suppression
Kidney tumor

Cited by (0)

Devin O’Kelly is currently a PhD student at the University of Texas Southwestern Medical Center (UTSW) pursuing a degree in Biomedical and Molecular Imaging as well as Computational and Systems Biology. He received his B.S. in Biomedical Engineering with high honors from the University of Texas at Austin. His major research interest is the development and application of experimental techniques and numerical methods in order to probe complex biological systems using high-information imaging. He is a Biomedical High-Performance Computing Fellow at the UTSW BioHPC, developing computational frameworks to enable scalable analyses of massive imaging datasets.

Dr. Yihang Guo is currently a visiting fellow of the Small Animal Imaging Resource at the University of Texas Southwestern Medical Center (UTSW), as well as a surgical doctor of the Department of Gastrointestinal Surgery at The Third XiangYa Hospital of Central South University in China. He received his M.D and Ph.D in Clinical Medicine from Central South University. His major research interest is the development and application of molecular animal imaging for predicting optimal cancer therapy and assessing early response to treatment. He has extensive experience with building multiple animal orthotopic tumor models in kidney, lung, colon, pancreas and tibia.

Dr. Ralph Mason, a chemist by training, has over 25 years’ experience in cancer imaging, therapy, and tumor pathophysiology. He is Professor of Radiology and directs the Small Animal Imaging Resource. His primary research interest is prognostic radiology - developing and implementing methods for predicting optimal cancer therapy and assessing early response to treatment ("precision medicine"). Dr. Mason has experience with diverse imaging modalities and has published extensively regarding technology development and applications to assessing hypoxia, radiation therapy and the effects of vascular disrupting agents.