Abstract
Neurodegenerative diseases are accompanied by changes in the activity of thiamine mono- and diphosphate phosphatases, but molecular identification of these mammalian enzymes is incomplete. In this work, the protein fraction of bovine brain synaptosomes displaying phosphatase activity toward thiamine derivatives was subjected to affinity chromatography on thiamine-Sepharose. Protein fractions eluted with thiamine (pH 7.4 or 5.6), NaCl, and urea were assayed for the phosphatase activity against thiamine monophosphate (ThMP), thiamine diphosphate (ThDP), and structurally similar purine nucleotides. Proteins in each fraction were identified by mass spectrometry using the SwissProt database for all organisms because of insufficient annotation of the bovine genome. Peptides of two annotated bacterial phosphatases, alkaline phosphatase L from the DING protein family and exopolyphosphatase, were identified in the acidic thiamine eluate. The abundance of peptides of alkaline phosphatase L and exopolyphosphatase in the eluted fractions correlated with ThMPase and ThDPase activities, respectively. The elution profiles of the ThMPase and ThDPase activities differed from the elution profiles of nucleotide phosphatases, thus indicating the specificity of these enzymes toward thiamine derivatives. The search for mammalian DING phosphatases in the eluates from thiamine-Sepharose revealed X-DING-CD4, mostly eluted by the acidic thiamine solution (pH 5.6). The identified exopolyphosphatase demonstrated structural similarity with apyrases possessing the ThDPase activity. The obtained results demonstrate that mammalian DING proteins and apyrases exhibit ThMPase and ThDPase activity, respectively.
Similar content being viewed by others
Abbreviations
- DING:
-
protein family, named after the protein N-terminal tetrapeptide
- HPBP:
-
human phosphate-binding DING protein
- ThDP:
-
thiamine diphosphate
- ThMP:
-
thiamine monophosphate
- X-DING-CD4:
-
DING protein secreted by CD4+ T cells
References
Bunik, V. I., and Aleshin, V. A. (2017) Analysis of the protein binding sites for thiamin and its derivatives to elucidate the molecular mechanisms of the noncoenzyme action of thiamin (vitamin B1), in Studies in Natural Products Chemistry, Elsevier, Amsterdam, Vol. 53, pp. 375–429, doi: https://doi.org/10.1016/b978-0-444-63930-1.00011-9
Aleshin, V. A., Mkrtchyan, G. V., and Bunik, V. I. (2019) Mechanisms of the non-coenzyme action of thiamin: protein targets and medical significance, Biochemistry (Moscow), 84, 829–850, doi: https://doi.org/10.1134/S0006297919080017.
Hurt, J. K., Coleman, J. L., Fitzpatrick, B. J., TaylorBlake, B., Bridges, A. S., Vihko, P., and Zylka, M. J. (2012) Prostatic acid phosphatase is required for the antinociceptive effects of thiamine and benfotiamine, PLoS One, 7, e48562, doi: https://doi.org/10.1371/journal.pone.0048562
Parkhomenko, Y. M., Protasova, Z. S., Yanchiy, O. R., Khosla, K., and Donchenko, G. V. (2001) Localization of thiamine-binding protein in synaptosomes from the rat brain, Neurophysiology, 33, 135–139, doi: https://doi.org/10.1023/a:1012840417285.
Postoenko, V. A., Parkhomenko, Iu. M., Vovk, A. I., Khalmuradov, A. G., and Donchenko, G. V. (1987) Isolation and various properties of thiamine-binding protein from synaptosomes in the rat brain, Biokhimiya, 52, 1792–1797.
Pan, X., Sang, S., Fei, G., Jin, L., Liu, H., Wang, Z., Wang, H., and Zhong, C. (2017) Enhanced activities of blood thiamine diphosphatase and monophosphatase in Alzheimer’s disease, PLoS One, 12, e0167273, doi: https://doi.org/10.1371/journal.pone.0167273
Sang, S., Pan, X., Chen, Z., Zeng, F., Pan, S., Liu, H., Jin, L., Fei, G., Wang, C., Ren, S., Jiao, F., Bao, W., Zhou, W., Guan, Y., Zhang, Y., Shi, H., Wang, Y., Yu, X., Wang, Y., and Zhong, C. (2018) Thiamine diphosphate reduction strongly correlates with brain glucose hypometabolism in Alzheimer’s disease, whereas amyloid deposition does not, Alzheimers Res. Ther., 10, 26, doi: https://doi.org/10.1186/s13195-018-0354-2.
Diemer, H., Elias, M., Renault, F., Rochu, D., Contreras-Martel, C., Schaeffer, C., Van Dorsselaer, A., and Chabriere, E. (2008) Tandem use of X-ray crystallography and mass spectrometry to obtain ab initio the complete and exact amino acids sequence of HPBP, a human 38-kDa apolipoprotein, Proteins, 71, 1708–1720, doi: https://doi.org/10.1002/prot.21866.
Renault, F., Chabriere, E., Andrieu, J. P., Dublet, B., Masson, P., and Rochu, D. (2006) Tandem purification of two HDL-associated partner proteins in human plasma, paraoxonase (PON1) and phosphate binding protein (HPBP) using hydroxyapatite chromatography, J. Chromatogr. B Analyt. Technol. Biomed. Life Sci., 836, 15–21, doi: https://doi.org/10.1016/j.jchromb.2006.03.029.
Gonzalez, D., Elias, M., and Chabriere, E. (2014) The DING family of phosphate binding proteins in inflammatory diseases, Adv. Exp. Med. Biol., 824, 27–32, doi: https://doi.org/10.1007/978-3-319-07320-04.
Klyashchitsky, B. A., Pozdnev, V. F., Mitina, V. K., Voskoboev, A. I., and Chernikevich, I. P. (1980) Isolation and purification of biopolymers by biospecific affinity chromatography. Affinity chromatography of pyruvate decarboxylase from brewer’s yeast, Bioorg. Khim., 6, 1572–1579.
Mkrtchyan, G., Aleshin, V., Parkhomenko, Y., Kaehne, T., Di Salvo, M. L., Parroni, A., Contestabile, R., Vovk, A., Bettendorff, L., and Bunik, V. (2015) Molecular mechanisms of the non-coenzyme action of thiamin in brain: biochemical, structural and pathway analysis, Sci. Rep., 5, 12583, doi: https://doi.org/10.1038/srep12583.
Mezhenska, O. A., Aleshin, V. A., Kaehne, T., Artiukhov, A. V., and Bunik, V. I. (2020) Regulation of malate dehydrogenases and glutamate dehydrogenase in animal brain with thiamine in vitro and in vivo, Biochemistry (Moscow), 85, 27–39, doi: https://doi.org/10.1134/S0006297920010034
Chan, K. M., Delfert, D., and Junger, K. D. (1986) A direct colorimetric assay for Ca2+-stimulated ATPase activity, Anal. Biochem., 157, 375–380, doi: https://doi.org/10.1016/0003-2697(86)90640-8.
Lowry, O. H., Rosebrough, N. J., Farr, A. L., and Randall, R. J. (1951) Protein measurement with the Folin phenol reagent, J. Biol. Chem., 193, 265–275.
Bunik, V., Kaehne, T., Degtyarev, D., Shcherbakova, T., and Reiser, G. (2008) Novel isoenzyme of 2-oxoglutarate dehydrogenase is identified in brain, but not in heart, FEBS J., 275, 4990–5006, doi: https://doi.org/10.1111/j.1742-4658.2008.06632.x
Berna, A., Bernier, F., Chabriere, E., Perera, T., and Scott, K. (2008) DING proteins; novel members of a prokaryotic phosphate-binding protein superfamily which extends into the eukaryotic kingdom, Int. J. Biochem. Cell Biol., 40, 170–175, doi: https://doi.org/10.1016/j.biocel.2007.02.004.
Collombet, J. M., Elias, M., Gotthard, G., Four, E., Renault, F., Joffre, A., Baubichon, D., Rochu, D., and Chabriere, E. (2010) Eukaryotic DING proteins are endogenous: an immunohistological study in mouse tissues, PLoS One, 5, e9099, doi: https://doi.org/10.1371/journal.pone.0009099
Cherrier, T., Elias, M., Jeudy, A., Gotthard, G., Le Douce, V., Hallay, H., Masson, P., Janossy, A., Candolfi, E., Rohr, O., Chabriere, E., and Schwartz, C. (2011) Human-phosphate-binding-protein inhibits HIV-1 gene transcription and replication, Virol. J., 8, 352, doi: https://doi.org/10.1186/1743-422X-8-352
Sachdeva, R., Li, Y., Shilpi, R. Y., and Simm, M. (2015) Human X-DING-CD4 mediates resistance to HIV-1 infection through novel paracrine-like signaling, FEBS J., 282, 937–950, doi: https://doi.org/10.1111/febs.13192
Morales, R., Berna, A., Carpentier, P., Contreras-Martel, C., Renault, F., Nicodeme, M., Chesne-Seck, M. L., Bernier, F., Dupuy, J., Schaeffer, C., Diemer, H., Van-Dorsselaer, A., Fontecilla-Camps, J. C., Masson, P., Rochu, D., and Chabriere, E. (2006) Serendipitous discovery and X-ray structure of a human phosphate binding apolipoprotein, Structure, 14, 601–609, doi: https://doi.org/10.1016/j.str.2005.12.012.
Lesner, A., Shilpi, R., Ivanova, A., Gawinowicz, M. A., Lesniak, J., Nikolov, D., and Simm, M. (2009) Identification of X-DING-CD4, a new member of human DING protein family that is secreted by HIV-1 resistant CD4+ T cells and has anti-viral activity, Biochem. Biophys. Res. Commun., 389, 284–289, doi: https://doi.org/10.1016/j.bbrc.2009.08.140.
Ivanova, A., Shilpi, R. Y., Sachdeva, R., Li, G., and Simm, M. (2012) Native X-DING-CD4 protein secreted by HIV-1 resistant CD4+ T cells blocks activity of IL-8 promoter in human endothelial cells infected with enteric bacteria, Innate Immun., 18, 571–579, doi: https://doi.org/10.1177/1753425911427065
Porzio, E., De Maio, A., Ricciardi, T., Mistretta, C., Manco, G., and Faraone-Mennella, M. R. (2018) Comparison of the DING protein from the archaeon Sulfolobus solfataricus with human phosphate-binding protein and Pseudomonas fluorescence DING counterparts, Extremophiles, 22, 177–188, doi: https://doi.org/10.1007/s00792-017-0985-4.
Rochu, D., Renault, F., Clery-Barraud, C., Chabriere, E., and Masson, P. (2007) Stability of highly purified human paraoxonase (PON1): association with human phosphate binding protein (HPBP) is essential for preserving its active conformation(s), Biochim. Biophys. Acta, 1774, 874–883, doi: https://doi.org/10.1016/j.bbapap.2007.05.001.
Vovk, A. I., Babii, L. V., and Murav’eva, I. V. (2002) Relative reactivity of thiamine monophosphate and thiamine diphosphate upon interaction with alkaline phosphatase, Ukr. Biokhim. Zh., 74, 93–96.
Beassoni, P. R., Gallarato, L. A., Boetsch, C., Garrido, M. N., and Lisa, A. T. (2015) Pseudomonas aeruginosa exopolyphosphatase is also a polyphosphate:ADP phosphotransferase, Enzyme Res., 2015, 404607, doi: https://doi.org/10.1155/2015/404607.
Song, H., Dharmasena, M. N., Wang, C., Shaw, G. X., Cherry, S., Tropea, J. E., Jin, D. J., and Ji, X. (2019) Structure and activity of PPX/GppA homologs from Escherichia coli and Helicobacter pylori, FEBS J., doi: https://doi.org/10.1111/febs.15120
Zebisch, M., Krauss, M., Schafer, P., Lauble, P., and Strater, N. (2013) Crystallographic snapshots along the reaction pathway of nucleoside triphosphate diphosphohy-drolases, Structure, 21, 1460–1475, doi: https://doi.org/10.1016/j.str.2013.05.016.
Sano, S.-I., Matsuda, Y., Miyamoto, S., and Nakagawa, H. (1984) Thiamine pyrophosphatase and nucleoside diphosphatase in rat brain, Biochem. Biophys. Res. Commun., 118, 292–298, doi: https://doi.org/10.1016/0006-291x(84)91099-4.
Author information
Authors and Affiliations
Corresponding authors
Additional information
Funding
The work was supported by the Russian Foundation for Basic Research (project 18-34-00235).
Conflict of interest
The authors declare no conflict of interest.
Ethical statement
All applicable international, national and institutional principles of animal care were satisfied. All animal experiments were performed according to the animal care regulations of the EU directive 2010/63/EU and approved by the Bioethics Committee of the Lomonosov Moscow State University.
Rights and permissions
About this article
Cite this article
Aleshin, V.A., Mezhenska, O.A., Parkhomenko, Y.M. et al. Thiamine Mono- and Diphosphate Phosphatases in Bovine Brain Synaptosomes. Biochemistry Moscow 85, 378–386 (2020). https://doi.org/10.1134/S000629792003013X
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1134/S000629792003013X