Chapter Six - A lipid perspective on regulated cell death

https://doi.org/10.1016/bs.ircmb.2019.11.004Get rights and content

Abstract

Lipids are fundamental to life as structural components of cellular membranes and for signaling. They are also key regulators of different cellular processes such as cell division, proliferation, and death. Regulated cell death (RCD) requires the engagement of lipids and lipid metabolism for the initiation and execution of its killing machinery. The permeabilization of lipid membranes is a hallmark of RCD that involves, for each kind of cell death, a unique lipid profile. While the permeabilization of the mitochondrial outer membrane allows the release of apoptotic factors to the cytosol during apoptosis, permeabilization of the plasma membrane facilitates the release of intracellular content in other nonapoptotic types of RCD like necroptosis and ferroptosis. Lipids and lipid membranes are important accessory molecules required for the activation of protein executors of cell death such as BAX in apoptosis and MLKL in necroptosis. Peroxidation of membrane phospholipids and the subsequent membrane destabilization is a prerequisite to ferroptosis. Here, we discuss how lipids are essential players in apoptosis, the most common form of RCD, and also their role in necroptosis and ferroptosis. Altogether, we aim to highlight the contribution of lipids and membrane dynamics in cell death regulation.

Introduction

Regulated cell death (RCD) is fundamental for the development and tissue homeostasis of multicellular organisms. It can be triggered under several physiological conditions and the imbalance between cell death and proliferation has been linked to many diseases, including autoimmunity, viral infections, neurodegenerative diseases and cancer (Nagata and Tanaka, 2017). Given the relevance of RCD to different human pathologies, its mechanisms of action and modulation by small molecules, is of profound therapeutic interest. Apoptosis constitutes the most frequent form of RCD in vertebrates. Well-defined morphological features are linked with apoptotic cell death, such as membrane blebbing, pyknotic nuclei formation, phosphatidylserine (PS) exposure on the outer leaflet of the plasma membrane, etc. A variety of additional nonapoptotic forms of RCD have recently been described, including necroptosis and ferroptosis, amongst others. These forms of RCD involve disruption of the plasma membrane (PM), cellular swelling and release of damage-associated molecular patterns (DAMPs), and have an inflammatory phenotype (Linkermann et al., 2013; Vince and Silke, 2016; Wallach et al., 2016; Zhang et al., 2018). While membrane permeabilization appears as common theme in RCD, each form of cell death involves unique membrane-related changes that trigger and regulate their distinct biochemical machinery (Zhang et al., 2018). This is not surprising considering that lipids are essential structural biomolecules that are important for signaling in cell death (Friedmann Angeli et al., 2019; Phan et al., 2019; Tonnus et al., 2019).

Lipids have a key role as structural components in the membrane, where cell death-inducing proteins elicit pore formation. Each lipid species has a concrete form and shape, built by a defined combination of core structures, head groups and acyl chains. The unique physiochemical properties of specific lipids do not only modulate their location and the properties of membranes where they are integrated, but also their interactions with different mediators of RCD (Agmon and Stockwell, 2017; Bleicken et al., 2017; Flores-Romero et al., 2018; Magtanong et al., 2016). Lipids can enhance cell death by, for example, modulating the affinities between molecular executors and regulators (Kuwana et al., 2002). Indeed, in apoptosis, lipids constitute the building blocks of the proteolipidic apoptotic pore (Gonzalvez et al., 2005, Gonzalvez et al., 2008; Jalmar et al., 2013). Moreover, membrane lipids play an important role in membrane dynamics during RCD (Cosentino and Garcia-Saez, 2014; Ugarte-Uribe and Garcia-Saez, 2017). However, despite intense research efforts to study lipids at the molecular level, the functions of individual lipids in many cellular processes, including cell death, remain poorly defined. Here, we discuss current knowledge about the role of different lipids in apoptosis and two of the best-characterized forms of RCD, necroptosis and ferroptosis.

Section snippets

Mitochondrial changes in apoptosis

Mitochondria are key organelles in eukaryotic cells and play a fundamental role in stress sensing for cellular adaptation and in cell fate decisions. Beyond its importance in ATP production, mitochondrial dysfunction is involved in several human pathologies including neurodegenerative diseases (e.g., Parkinson's, Alzheimer's), and cancer (Flannery and Trushina, 2019; Grunewald et al., 2019; Vyas et al., 2016). The mitochondrion is thought to have a bacterial-evolutionary origin, resulting in

Role of lipids in nonapoptotic regulated cell death

In recent years, a number of genetically encoded machineries that induce cell death different to apoptosis have emerged, including necroptosis, pyroptosis and ferroptosis (Linkermann et al., 2013; Vince and Silke, 2016; Wallach et al., 2016). Despite the clear biochemical difference among these forms of nonapoptotic cell death, they all end up with the rupture of the plasma membrane and the release of intracellular contents. The PM represents the main target in these processes and the increase

Concluding remarks

Membranes are more than mere scaffolds where proteins associate to rule cellular processes. They provide compartmentalization, thereby enabling gradients, which are fundamental for cellular homeostasis. There are many pathways by which cells can mediate their own dismissal. Each of them is characterized by a unique membrane alteration pattern, but they all share the loosening of the membrane integrity. For the execution of cell death, membrane lipid composition determines specific protein-lipid

Acknowledgments

We thank Dr. John S. Danial and Malina John for carefully reading our manuscript and for their comments. Work in our lab is supported by the European Research Council and by the Deutsche Forschungsgemeinschaft. A.J.G.S. is a Young Investigator from EMBO.

References (262)

  • S. Bleicken et al.

    Mechanistic differences in the membrane activity of Bax and Bcl-xL correlate with their opposing roles in apoptosis

    Biophys. J.

    (2013)
  • S. Bleicken et al.

    Structural model of active Bax at the membrane

    Mol. Cell

    (2014)
  • I.R. Boldogh et al.

    Interactions of mitochondria with the actin cytoskeleton

    Biochim. Biophys. Acta

    (2006)
  • E.A. Bordt et al.

    The putative Drp1 inhibitor mdivi-1 is a reversible mitochondrial complex I inhibitor that modulates reactive oxygen species

    Dev. Cell

    (2017)
  • P.F. Cartron et al.

    Distinct domains control the addressing and the insertion of Bax into mitochondria

    J. Biol. Chem.

    (2005)
  • L. Chen et al.

    Differential targeting of prosurvival Bcl-2 proteins by their BH3-only ligands allows complementary apoptotic function

    Mol. Cell

    (2005)
  • J.E. Chipuk et al.

    Sphingolipid metabolism cooperates with BAK and BAX to promote the mitochondrial pathway of apoptosis

    Cell

    (2012)
  • S. Cipolat et al.

    Mitochondrial rhomboid PARL regulates cytochrome c release during apoptosis via OPA1-dependent cristae remodeling

    Cell

    (2006)
  • D.E. Clapham

    Calcium signaling

    Cell

    (2007)
  • S.M. Claypool et al.

    The complexity of cardiolipin in health and disease

    Trends Biochem. Sci.

    (2012)
  • A. Colbeau et al.

    Enzymic characterization and lipid composition of rat liver subcellular membranes

    Biochim. Biophys. Acta

    (1971)
  • M. Colombini

    Ceramide channels and their role in mitochondria-mediated apoptosis

    Biochim. Biophys. Acta

    (2010)
  • K. Cosentino et al.

    Mitochondrial alterations in apoptosis

    Chem. Phys. Lipids

    (2014)
  • K. Cosentino et al.

    Bax and Bak pores: are we closing the circle?

    Trends Cell Biol.

    (2017)
  • A. Cremesti et al.

    Ceramide enables fas to cap and kill

    J. Biol. Chem.

    (2001)
  • G. Csordas et al.

    Imaging interorganelle contacts and local calcium dynamics at the ER-mitochondrial interface

    Mol. Cell

    (2010)
  • G. Csordas et al.

    Endoplasmic reticular-mitochondrial contactology: structure and signaling functions

    Trends Cell Biol.

    (2018)
  • P.E. Czabotar et al.

    Bax crystal structures reveal how BH3 domains activate Bax and nucleate its oligomerization to induce apoptosis

    Cell

    (2013)
  • G. Daum

    Lipids of mitochondria

    Biochim. Biophys. Acta

    (1985)
  • M.C. De Almagro et al.

    Necroptosis: pathway diversity and characteristics

    Semin. Cell Dev. Biol.

    (2015)
  • A.I. De Kroon et al.

    Phospholipid composition of highly purified mitochondrial outer membranes of rat liver and Neurospora crassa. Is cardiolipin present in the mitochondrial outer membrane?

    Biochim. Biophys. Acta

    (1997)
  • G. Dewson et al.

    To trigger apoptosis, Bak exposes its BH3 domain and homodimerizes via BH3: groove interactions

    Mol. Cell

    (2008)
  • S.J. Dixon et al.

    Ferroptosis: an iron-dependent form of nonapoptotic cell death

    Cell

    (2012)
  • Y. Dondelinger et al.

    MLKL compromises plasma membrane integrity by binding to phosphatidylinositol phosphates

    Cell Rep.

    (2014)
  • C.M. Dovey et al.

    MLKL requires the inositol phosphate code to execute necroptosis

    Mol. Cell

    (2018)
  • F. Edlich et al.

    Bcl-x(L) retrotranslocates Bax from the mitochondria into the cytosol

    Cell

    (2011)
  • R.F. Epand et al.

    Novel lipid transfer property of two mitochondrial proteins that bridge the inner and outer membranes

    Biophys. J.

    (2007)
  • R.A. Espiritu et al.

    Tuning the Way to Die: Implications of Membrane Perturbations in Necroptosis

    (2019)
  • A. Etxebarria et al.

    Endophilin B1/Bif-1 stimulates BAX activation independently from its capacity to produce large scale membrane morphological rearrangements

    J. Biol. Chem.

    (2009)
  • P.J. Flannery et al.

    Mitochondrial dynamics and transport in Alzheimer's disease

    Mol. Cell. Neurosci.

    (2019)
  • S. Fleischer et al.

    Lipid composition of mitochondria from bovine heart, liver and kidney

    J. Lipid. Res.

    (1967)
  • S. Frank et al.

    The role of dynamin-related protein 1, a mediator of mitochondrial fission, in apoptosis

    Dev. Cell

    (2001)
  • C. Frezza et al.

    OPA1 controls apoptotic cristae remodeling independently from mitochondrial fusion

    Cell

    (2006)
  • G. Fuertes et al.

    Pores formed by Baxalpha5 relax to a smaller size and keep at equilibrium

    Biophys. J.

    (2010)
  • S. Fulda

    Therapeutic exploitation of necroptosis for cancer therapy

    Semin. Cell Dev. Biol.

    (2014)
  • L. Galluzzi et al.

    Molecular mechanisms of regulated necrosis

    Semin. Cell Dev. Biol.

    (2014)
  • A.J. Garcia-Saez et al.

    Peptides derived from apoptotic Bax and Bid reproduce the poration activity of the parent full-length proteins

    Biophys. J.

    (2005)
  • T. Garofalo et al.

    Association of the death-inducing signaling complex with microdomains after triggering through CD95/Fas. Evidence for caspase-8-ganglioside interaction in T cells

    J. Biol. Chem.

    (2003)
  • M. Abate et al.

    Mitochondria as playmakers of apoptosis, autophagy and senescence

    Semin. Cell Dev. Biol.

    (2019)
  • L. Arana et al.

    Ceramide and ceramide 1-phosphate in health and disease

    Lipids Health Dis.

    (2010)
  • Cited by (18)

    • Maternal naringenin supplementation during pregnancy disrupts the redox status in the developing rats’ brain

      2023, Treatments, Nutraceuticals, Supplements, and Herbal Medicine in Neurological Disorders
    • Pore-forming proteins: From defense factors to endogenous executors of cell death

      2021, Chemistry and Physics of Lipids
      Citation Excerpt :

      SM is the putative receptor for lysenin (Kulma et al., 2010; Yamaji-Hasegawa et al., 2003) and actinoporins (Alvarez et al., 2009; Garcia-Ortega et al., 2011). To execute apoptosis, BAX is targeted to the mitochondria outer membrane, probably due to its interaction with cardiolipin (Dudek, 2017; Flores-Romero et al., 2020). In contrast, GSDMs and MLKL bind to the inner leaflet of the plasma membrane via their interaction with negatively charged phospholipids to mediate pyroptosis and necroptosis (Dondelinger et al., 2014; Liu et al., 2016).

    View all citing articles on Scopus
    View full text