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Identification of the molecular components of a putative Jasus edwardsii (Crustacea; Decapoda; Achelata) circadian signaling system

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Invertebrate Neuroscience

Abstract

Like all organisms, members of the crustacean order Decapoda must coordinate their physiology and behavior to accommodate recurring patterns of environmental change. Genetically encoded biological clocks are responsible, at least in part, for the proper timing of these organism-environment patternings. While biological clocks cycling on a wide range of timescales have been identified, the circadian signaling system, which serves to coordinate physiological/behavioral events to the solar day, is perhaps the best known and most thoroughly investigated. While many circadian patterns of physiology/behavior have been documented in decapods, few data exist concerning the identity of circadian genes/proteins in members of this taxon. In fact, large collections of circadian genes/proteins have been described from just a handful of decapod species. Here, a publicly accessible transcriptome, produced from tissues that included the nervous system (brain and eyestalk ganglia), was used to identify the molecular components of a circadian signaling system for rock lobster, Jasus edwardsii, a member of the decapod infraorder Achelata. Complete sets of core clock (those involved in the establishment of the molecular feedback loop that allows for ~ 24-h cyclical timing), clock-associated (those involved in modulation of core clock output), and clock input pathway (those that allow for synchronization of the core clock to the solar day) genes/proteins are reported. This is the first description of a putative circadian signaling system from any member of the infraorder Achelata, and as such, expands the decapod taxa for which complete complements of putative circadian genes/proteins have been identified.

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References

  • Allada R, Chung BY (2010) Circadian organization of behavior and physiology in Drosophila. Annu Rev Physiol 72:605–624

    Article  CAS  Google Scholar 

  • Christie AE, Yu A (2019) Identification of peptide hormones and their cognate receptors in Jasus edwardsii—a potential resource for the development of new aquaculture management strategies for rock/spiny lobsters. Aquaculture 503:636–662

    Article  CAS  Google Scholar 

  • Christie AE, Fontanilla TM, Nesbit KT, Lenz PH (2013) Prediction of the protein components of a putative Calanus finmarchicus (Crustacea, Copepoda) circadian signaling system using a de novo assembled transcriptome. Comp Biochem Physiol Part D Genomics Proteomics 8:165–193

    Article  CAS  Google Scholar 

  • Christie AE, Roncalli V, Cieslak MC, Pascual MG, Yu A, Lameyer TJ, Stanhope ME, Dickinson PS (2017) Prediction of a neuropeptidome for the eyestalk ganglia of the lobster Homarus americanus using a tissue-specific de novo assembled transcriptome. Gen Comp Endocrinol 243:96–119

    Article  CAS  Google Scholar 

  • Christie AE, Yu A, Pascual MG, Roncalli V, Cieslak MC, Warner AN, Lameyer TJ, Stanhope ME, Dickinson PS, Joe Hull J (2018a) Circadian signaling in Homarus americanus: region-specific de novo assembled transcriptomes show that both the brain and eyestalk ganglia possess the molecular components of a putative clock system. Mar Genomics 40:25–44

    Article  Google Scholar 

  • Christie AE, Yu A, Roncalli V, Pascual MG, Cieslak MC, Warner AN, Lameyer TJ, Stanhope ME, Dickinson PS, Hull JJ (2018b) Molecular evidence for an intrinsic circadian pacemaker in the cardiac ganglion of the American lobster, Homarus americanus—is diel cycling of heartbeat frequency controlled by a peripheral clock system? Mar Genomics 41:19–30

    Article  Google Scholar 

  • Christie AE, Yu A, Pascual MG (2018c) Circadian signaling in the Northern krill Meganyctiphanes norvegica: In silico prediction of the protein components of a putative clock system using a publicly accessible transcriptome. Mar Genomics 37:97–113

    Article  Google Scholar 

  • El-Gebali S, Mistry J, Bateman A, Eddy SR, Luciani A, Potter SC, Qureshi M, Richardson LJ, Salazar GA, Smart A, Sonnhammer ELL, Hirsh L, Paladin L, Piovesan D, Tosatto SCE, Finn RD (2019) The Pfam protein families database in 2019. Nucleic Acids Res 47:D427–D432

    Article  CAS  Google Scholar 

  • Fitzgibbon QP, Battaglene SC (2012) Effect of photoperiod on the culture of early-stage phyllosoma and metamorphosis of spiny lobster (Sagmariasus verreauxi). Aquaculture 368:48–54

    Article  Google Scholar 

  • Golombek DA, Bussi IL, Agostino PV (2014) Minutes, days and years: molecular interactions among different scales of biological timing. Philos Trans R Soc Lond B Biol Sci 369:20120465

    Article  CAS  Google Scholar 

  • Gramates LS, Marygold SJ, Santos GD, Urbano JM, Antonazzo G, Matthews BB, Rey AJ, Tabone CJ, Crosby MA, Emmert DB, Falls K, Goodman JL, Hu Y, Ponting L, Schroeder AJ, Strelets VB, Thurmond J, Zhou P, The FlyBase Consortium (2017) FlyBase at 25: looking to the future. Nucleic Acids Res 45:D663–D671

    Article  CAS  Google Scholar 

  • Hardin PE (2011) Molecular genetic analysis of circadian timekeeping in Drosophila. Adv Genet 74:141–173

    Article  CAS  Google Scholar 

  • Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30:772–780

    Article  CAS  Google Scholar 

  • Matsuda H, Takenouchi T, Yamakawa T (2003) Diel timing of molting and metamorphosis of Panulirus japonicus phyllosoma larvae under laboratory conditions. Fisheries Sci 69:124–130

    Article  CAS  Google Scholar 

  • Mendoza-Viveros L, Bouchard-Cannon P, Hegazi S, Cheng AH, Pastore S, Cheng HM (2017) Molecular modulators of the circadian clock: lessons from flies and mice. Cell Mol Life Sci 74:1035–1059

    Article  CAS  Google Scholar 

  • Nesbit KT, Christie AE (2014) Identification of the molecular components of a Tigriopus californicus (Crustacea, Copepoda) circadian clock. Comp Biochem Physiol Part D Genomics Proteomics 12:16–44

    Article  CAS  Google Scholar 

  • O’Grady JF, Hoelters LS, Swain MT, Wilcockson DC (2016) Identification and temporal expression of putative circadian clock transcripts in the amphipod crustacean Talitrus saltator. PeerJ 4:e2555

    Article  CAS  Google Scholar 

  • Ozkaya O, Rosato E (2012) The circadian clock of the fly: a neurogenetics journey through time. Adv Genet 77:79–123

    Article  CAS  Google Scholar 

  • Radford CA, Marsden ID, Davison W (2004) Temporal variation in the specific dynamic action of juvenile New Zealand rock lobsters, Jasus edwardsii. Comp Biochem Physiol A: Mol Integr Physiol 139:1–9

    Article  CAS  Google Scholar 

  • Roncalli V, Christie AE, Sommer SA, Cieslak MC, Hartline DK, Lenz PH (2017) A deep transcriptomic resource for the copepod crustacean Labidocera madurae: a potential indicator species for assessing near shore ecosystem health. PLoS ONE 12:e0186794

    Article  CAS  Google Scholar 

  • Sbragaglia V, Lamanna F, Mat AM, Rotllant G, Joly S, Ketmaier V, de la Iglesia HO, Aguzzi J (2015) Identification, characterization, and diel pattern of expression of canonical clock genes in Nephrops norvegicus (Crustacea: decapoda) eyestalk. PLoS ONE 10:e0141893

    Article  CAS  Google Scholar 

  • Souza CA, Murphy N, Strugnell JM (2018) De novo transcriptome assembly and functional annotation of the southern rock lobster (Jasus edwardsii). Mar Genomics 42:58–62

    Article  Google Scholar 

  • Strauss J, Dircksen H (2010) Circadian clocks in crustaceans: identified neuronal and cellular systems. Front Biosci (Landmark Ed) 15:1040–1074

    Article  Google Scholar 

  • Tilden AR, McCoole MD, Harmon SM, Baer KN, Christie AE (2011) Genomic identification of a putative circadian system in the cladoceran crustacean Daphnia pulex. Comp Biochem Physiol Part D Genomics Proteomics 6:282–309

    Article  CAS  Google Scholar 

  • Yoshii T, Hermann-Luibl C, Helfrich-Förster C (2015) Circadian light-input pathways in Drosophila. Commun Integr Biol 9:e1102805

    Article  CAS  Google Scholar 

  • Yuan Q, Metterville D, Briscoe AD, Reppert SM (2007) Insect cryptochromes: gene duplication and loss define diverse ways to construct insect circadian clocks. Mol Biol Evol 24:948–955

    Article  CAS  Google Scholar 

  • Ziegler TA, Cohen JH, Forward RB Jr (2010) Proximate control of diel vertical migration in Phyllosoma larvae of the Caribbean spiny lobster Panulirus argus. Biol Bull 219:207–219

    Article  Google Scholar 

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Acknowledgements

Lisa Baldwin is thanked for reading and editing an earlier version of this article. The National Science Foundation (IOS-1856307) and the Cades Foundation (Honolulu, Hawaii) provided funding for this study.

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Correspondence to Andrew E. Christie.

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10158_2020_236_MOESM1_ESM.docx

Amino acid sequences of all core clock, clock-associated and clock input pathway proteins deduced from Jasus edwardsii transcripts. (DOCX 197 kb)

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Christie, A.E. Identification of the molecular components of a putative Jasus edwardsii (Crustacea; Decapoda; Achelata) circadian signaling system. Invert Neurosci 20, 3 (2020). https://doi.org/10.1007/s10158-020-0236-8

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  • DOI: https://doi.org/10.1007/s10158-020-0236-8

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