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Licensed Unlicensed Requires Authentication Published by De Gruyter November 20, 2019

GPU-enabled design of an adaptable pattern recognition system for discriminating squamous intraepithelial lesions of the cervix

  • Christos Konstandinou , Spiros Kostopoulos ORCID logo EMAIL logo , Dimitris Glotsos , Dimitra Pappa , Panagiota Ravazoula , George Michail , Ioannis Kalatzis , Pantelis Asvestas , Eleftherios Lavdas , Dionisis Cavouras and George Sakellaropoulos

Abstract

The aim of the present study was to design an adaptable pattern recognition (PR) system to discriminate low- from high-grade squamous intraepithelial lesions (LSIL and HSIL, respectively) of the cervix using microscopy images of hematoxylin and eosin (H&E)-stained biopsy material from two different medical centers. Clinical material comprised H&E-stained biopsies of 66 patients diagnosed with LSIL (34 cases) or HSIL (32 cases). Regions of interest were selected from each patient’s digitized microscopy images. Seventy-seven features were generated, regarding the texture, morphology and spatial distribution of nuclei. The probabilistic neural network (PNN) classifier, the exhaustive search feature selection method, the leave-one-out (LOO) and the bootstrap validation methods were used to design the PR system and to assess its precision. Optimal PR system design and evaluation were made feasible by the employment of graphics processing unit (GPU) and Compute Unified Device Architecture (CUDA) technologies. The accuracy of the PR-system was 93% and 88.6% when using the LOO and bootstrap validation methods, respectively. The proposed PR system for discriminating LSIL from HSIL of the cervix was designed to operate in a clinical environment, having the capability of being redesigned when new verified cases are added to its repository and when data from other medical centers are included, following similar biopsy material preparation procedures.

Acknowledgments

The authors would like to thank the Departments of Pathology of the University Hospital of Patras and IASO Thessalias medical center, for supplying and assisting in the peer evaluation of the H&E-stained histology specimens.

  1. Author statement

  2. Research funding: None declared.

  3. Conflict of interest: None declared.

  4. Informed consent: Informed consent is not applicable.

  5. Ethical approval: The study was conducted in accordance with the guidelines of the Declaration of Helsinki and of the Ethics Committee of the University of Patras, Greece.

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Received: 2019-02-15
Accepted: 2019-08-30
Published Online: 2019-11-20
Published in Print: 2020-05-26

©2019 Walter de Gruyter GmbH, Berlin/Boston

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