Skip to main content

Advertisement

Log in

A personal retrospective on the mechanisms of antigen processing

  • Review
  • Published:
Immunogenetics Aims and scope Submit manuscript

Abstract

My intention here is to describe the history of the molecular aspects of the antigen processing field from a personal perspective, beginning with the early identification of the species that we now know as MHC class I and MHC class II molecules, to the recognition that their stable surface expression and detection by T cells depends on peptide association, and to the unraveling of the biochemical and cell biological mechanisms that regulate peptide binding. One goal is to highlight the role that serendipity or, more colloquially, pure blind luck can play in advancing the research enterprise when it is combined with an appropriately receptive mind. This is not intended to be an overarching review, and because of my own work I focus primarily on studies of the human MHC. This means that I neglect the work of many other individuals who made advances in other species, particularly those who produced the many knockout mouse strains used to demonstrate the importance of the antigen processing machinery for initiating immune responses. I apologize in advance to colleagues around the globe whose contributions I deal with inadequately for these reasons, and to those whose foundational work is now firmly established in text books and therefore not cited. So many individuals have worked to advance the field that giving all of them the credit they deserve is almost impossible. I have attempted, while focusing on work from my own laboratory, to point out contemporaneous or sometimes earlier advances made by others. Much of the success of my own laboratory came because we simultaneously worked on both the MHC class I and class II systems and used the findings in one area to inform the other, but mainly it depended on the extraordinary group of students and fellows who have worked on these projects over the years. To those who worked in other areas who are not mentioned here, rest assured that I appreciate your efforts just as much.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Ackerman AL, Cresswell P (2003) Regulation of MHC class I transport in human dendritic cells and the dendritic-like cell line KG-1. J Immunol 170:4178–4188

    Article  CAS  PubMed  Google Scholar 

  • Ackerman AL, Kyritsis C, Tampé R, Cresswell P (2003) Early phagosomes in dendritic cells form a cellular compartment sufficient for cross presentation of exogenous antigens. Proc Natl Acad Sci U S A 100:12889–12894

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Ackerman AL, Giodini A, Cresswell P (2006) A role for the endoplasmic reticulum protein retrotranslocation machinery during crosspresentation by dendritic cells. Immunity 25:607–617

    Article  CAS  PubMed  Google Scholar 

  • Alexander J, Payne AJ, Murray R, Frelinger JA, Cresswell P (1989) Differential transport requirements of HLA and H-2 class I glycoproteins. Immunogenetics 29:380–388

    Article  CAS  PubMed  Google Scholar 

  • Allan RS, Zueva E, Cammas F, Schreiber HA, Masson V, Belz GT, Roche D, Maison C, Quivy JP, Almouzni G, Amigorena S (2003) ER-phagosome fusion defines an MHC class I cross-presentation compartment in dendritic cells. Nature 425:397–412

    Article  CAS  Google Scholar 

  • Anderson KS, Cresswell P (1994) A role for calnexin (IP90) in the assembly of class II MHC molecules. EMBO J 13:675–682

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Anderson KS, Alexander J, Wei M, Cresswell P (1993) Intracellular transport of class I MHC molecules in antigen processing mutant cell lines. J Immunol 151:3407–3419

    CAS  PubMed  Google Scholar 

  • Androlewicz MJ, Cresswell P (1994) Human transporters associated with antigen processing possess a promiscuous peptide-binding site. Immunity 1:7–17

    Article  CAS  PubMed  Google Scholar 

  • Androlewicz MJ, Anderson KS, Cresswell P (1993) Evidence that transporters associated with antigen processing translocate a major histocompatibility complex class I-binding peptide into the endoplasmic reticulum in an ATP-dependent manner. Proc Natl Acad Sci U S A 90:9130–9134

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Androlewicz MJ, Ortmann B, van Endert PM, Spies T, Cresswell P (1994) Characteristics of peptide and major histocompatibility complex class I/beta 2-microglobulin binding to the transporters associated with antigen processing (TAP1 and TAP2). Proc Natl Acad Sci U S A 91:12716–12720

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Arnold D, Driscoll J, Androlewicz M, Hughes E, Cresswell P, Spies T (1992) Proteasome subunits encoded in the MHC are not generally required for the processing of peptides bound by MHC class I molecules. Nature 360:171–174

    Article  CAS  PubMed  Google Scholar 

  • Arshad N, Cresswell P (2018) Tumor-associated calreticulin variants functionally compromise the peptide loading complex and impair its recruitment of MHC-I. J Biol Chem 293:9555–9569

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Arunachalam B, Phan U, Geuze HJ, Cresswell P (2000) Enzymatic reduction of disulfide bonds in lysosomes: characterization of a gamma-interferon-inducible lysosomal thiol reductase (GILT). Proc Natl Acad Sci U S A 97:745–750

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Avva RR, Cresswell P (1994) In vivo and in vitro formation and dissociation of HLA-DR complexes with invariant chain-derived peptides. Immunity 1:763–774

    Article  CAS  PubMed  Google Scholar 

  • Babbitt BP, Allen PM, Matsueda G, Haber E, Unanue ER (1985) Binding of immunogenic peptides to Ia histocompatibility molecules. Nature 317:359–361

    Article  CAS  PubMed  Google Scholar 

  • Bangia N, Lehner P, Hughes EA, Surman M, Cresswell P (1999) The N-terminal region of tapasin is required to stabilize the MHC class I loading complex. Eur J Immunol 29:1858–1870

    Article  CAS  PubMed  Google Scholar 

  • Bevan MJ (1976) Cross-priming for a secondary cytotoxic response to minor H antigens with H-2 congenic cells which do not cross-react in the cytotoxic assay. J Exp Med 143:1283–1288

    Article  CAS  PubMed  Google Scholar 

  • Bjorkman PJ, Saper M, Samraoui B, Bennett WS, Strominger JL, Wiley DC (1987) Structure of the human class I histocompatibility antigen, HLA-A2. Nature 329:506–512

    Article  CAS  PubMed  Google Scholar 

  • Blees A, Januliene D, Hofmann T, Koller N, Schmidt C, Trowitzsch S, Moeller A, Tampé R (2017) Structure of the human MHC-I peptide-loading complex. Nature 551:525–528

    Article  CAS  PubMed  Google Scholar 

  • Blum JS, Cresswell P (1988) Role for intracellular proteases in the processing and transport of class II HLA antigens. Proc Natl Acad Sci U S A 85:3978–3979

    Article  Google Scholar 

  • Blum JS, Wearsch PA, Cresswell P (2013) Pathways of antigen processing. Annu Rev Immunol 31(1):443–473

  • Boyle LH, Hermann C, Boname JM, Porter KM, Patel PA, Burr ML, Duncan LM, Harbour ME, Rhodes DA, Skjødt K, Lehner PJ, Trowsdale J (2013) Tapasin-related protein TAPBPR is an additional component of the MHC class I presentation pathway. Proc Natl Acad Sci U S A 110:3465–3470

    Article  PubMed  PubMed Central  Google Scholar 

  • Brodsky JL, Wojcikiewicz R (2009) Substrate-specific mediators of ER associated degradation (ERAD). Curr Opin Cell Biol 21:516–521

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Cerundolo V, Alexander J, Anderson K, Lamb C, Cresswell P, McMichael A, Gotch F, Townsend A (1990) Presentation of viral antigen controlled by a gene in the major histocompatibility complex. Nature 345:449–452

    Article  CAS  PubMed  Google Scholar 

  • Chen M, Bouvier M (2007) Analysis of interactions in a tapasin/class I complex provides a mechanism for peptide selection. EMBO J 26:1681–1690

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Cresswell P (1985) Intracellular class II HLA antigens are accessible to transferrin-neuraminidase conjugates internalized by receptor-mediated endocytosis. Proc Natl Acad Sci U S A 82:8188–8192

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Cresswell P, Geier SG (1975) Antisera to human B-lymphocyte membrane glycoproteins block stimulation in mixed lymphocyte culture. Nature 257:147–149

    Article  CAS  PubMed  Google Scholar 

  • Cresswell P, Turner MJ, Strominger JL (1973) Papain-solubilized HL-A antigens from cultured human lymphocytes contain two peptide fragments. Proc Natl Acad Sci U S A 70:1603–1607

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Cresswell P, Robb R, Turner MJ, Strominger JL (1974a) Papain-solubilized HL-A antigens. Chromatographic and electrophoretic studies of the two subunits from different specificities. J Biol Chem 249:2828–2832

    CAS  PubMed  Google Scholar 

  • Cresswell P, Springer T, Strominger JL, Turner MJ, Grey HM, Kubo RT (1974b) Immunological identity of the small subunit of HL-A antigens and beta2-microglobulin and its turnover on the cell membrane. Proc Natl Acad Sci U S A 71:2123–2127

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Davidson HW, Reid PA, Lanzavecchia A, Watts C (1991) Processed antigen binds to newly synthesized MHC class II molecules in antigen-specific B lymphocytes. Cell 67:105–116

    Article  CAS  PubMed  Google Scholar 

  • DeMars R, Chang CC, Shaw S, Reitnauer PJ, Sondel PM (1984) Homozygous deletions that simultaneously eliminate expressions of class I and class II antigens of EBV-transformed B-lymphoblastoid cells. I. Reduced proliferative responses of autologous and allogeneic T cells to mutant cells that have decreased expression of class II antigens. Hum Immunol 11:77–97

    Article  CAS  PubMed  Google Scholar 

  • Denzin LK, Cresswell P (1995) HLA-DM induces CLIP dissociation from MHC class II alpha beta dimers and facilitates peptide loading. Cell 82:1550165

    Article  Google Scholar 

  • Denzin LK, Robbins N, Carboy-Newcomb C, Cresswell P (1994) Assembly and intracellular transport of HLA-DM and correction of the class II antigen-processing defect in T2 cells. Immunity 1:595–606

    Article  CAS  PubMed  Google Scholar 

  • Denzin LK, Sant'Angelo DB, Hammond C, Surman MJ, Cresswell P (1997) Negative regulation by HLA-DO of MHC class II-restricted antigen processing. Science 278:106–109

    Article  CAS  PubMed  Google Scholar 

  • Deverson EV, Gow IR, Coadwell WJ, Monaco JJ, Butcher GW, Howard JC (1990) MHC class II region encoding proteins related to the multidrug resistance family of transmembrane transporters. Nature 348:738–741

    Article  CAS  PubMed  Google Scholar 

  • Dick TP, Bangia N, Peaper DR, Cresswell P (2002) Disulfide bond isomerization and the assembly of MHC class I-peptide complexes. Immunity 16:87–98

    Article  CAS  PubMed  Google Scholar 

  • Dong G, Wearsch PA, Peaper DR, Cresswell P, Reinisch KM (2009) Insights into MHC class I peptide loading from the structure of the tapasin-ERp57 thiol oxidoreductase heterodimer. Immunity 30:21–32

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Fling SP, Arp B, Pious D (1994) HLA-DMA and -DMB genes are both required for MHC class II/peptide complex formation in antigen-presenting cells. Nature 368:554–558

    Article  CAS  PubMed  Google Scholar 

  • Gagnon E, Duclos S, Rondeau C, Chevet E, Cameron PH, Steele-Mortimer O, Paiement J, Bergeron JJ, Desjardins M (2002) Endoplasmic reticulum-mediated phagocytosis is a mechanism of entry into macrophages. Cell 110:119–131

    Article  CAS  PubMed  Google Scholar 

  • Garbi N, Tiwari N, Momburg F, Hämmerling GJ (2003) A major role for tapasin as a stabilizer of the TAP peptide transporter and consequences for MHC class I expression. Eur J Immunol 33:264–273

    Article  CAS  PubMed  Google Scholar 

  • Giodini A, Cresswell P (2008) Hsp90-mediated cytosolic refolding of exogenous proteins internalized by dendritic cells. EMBO J 27:201–211

    Article  CAS  PubMed  Google Scholar 

  • Giodini A, Rahner C, Cresswell P (2009) Receptor-mediated phagocytosis elicits cross-presentation in nonprofessional antigen-presenting cells. Proc Natl Acad Sci U S A 106:3324–3329

    Article  PubMed  PubMed Central  Google Scholar 

  • Grandea AG, Androlewicz MJ, Athwal RS, Geraghty DE, Spies T (1995) Dependence of peptide binding by MHC class I molecules on their interaction with TAP. Science 270:105–108

    Article  CAS  PubMed  Google Scholar 

  • Greenwood R, Shimuzu Y, Sekhon GS, DeMars R (1994) Novel allele-specific, post-translational reduction in HLA class I surface expression in a mutant human B cell line. J Immunol 153:5525–5536

    CAS  PubMed  Google Scholar 

  • Grey HM, Kubo R, Colon SM, Poulik MD, Cresswell P, Springer T, Turner M, Strominger JL (1973) The small subunit of HL-A antigens is beta 2-microglobulin. J Exp Med 138:1608–1612

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Grotzke JE, Cresswell P (2015) Are ERAD components involved in cross-presentation? Mol Immunol 68:112–115

    Article  CAS  PubMed  Google Scholar 

  • Grotzke JE, Lu Q, Cresswell P (2013) Deglycosylation-dependent fluorescent proteins provide unique tools for the study of ER-associated degradation. Proc Natl Acad Sci U S A 110:3393–3398

    Article  PubMed  PubMed Central  Google Scholar 

  • Henderson RA, Michel H, Sakaguchi K, Shabanowitz J, Appella E, Hunt DF, Engelhard VH (1992) HLA-A2.1-associated peptides from a mutant cell line: a second pathway of antigen presentation. Science 255:1264–1266

    Article  CAS  PubMed  Google Scholar 

  • Hermann C, van Hateren A, Trautwein N, Neerincx A, Duriez PJ, Stevanović S, Trowsdale J, Deane JE, Elliott T, Boyle LH (2015) TAPBPR alters MHC class I peptide presentation by functioning as a peptide exchange catalyst. Elife. https://doi.org/10.7554/eLife.09617

  • Hosken NA, Bevan MJ (1990) Defective presentation of endogenous antigen by a cell line expressing class I molecules. Science 248:367–370

    Article  CAS  PubMed  Google Scholar 

  • Houde M, Bertholet S, Gagnon E, Brunet S, Goyette G, Laplante A, Princiotta MF, Thibault P, Sacks D, Desjardins M (2003) Phagosomes are competent organelles for antigen cross-presentation. Nature 425:402–406

    Article  CAS  PubMed  Google Scholar 

  • Howell DN, Cresswell P (1983) Expression of T-lymphoblast-encoded HLA-DR antigens on human T-B lymphoblast hybrids. Immunogenetics 17:411–425

    Article  CAS  PubMed  Google Scholar 

  • Hughes EA, Cresswell P (1998) The thiol oxidoreductase ERp57 is a component of the MHC class I peptide-loading complex. Curr Biol 8:709–712

    Article  CAS  PubMed  Google Scholar 

  • Humphreys RE, McCune J, Chess L, Herrman HC, Malenka DJ, Mann DL, Parham P, Schlossman SF, Strominger JL (1976) Isolation and immunologic characterization of a human. B-lymphocyte-specific, cell surface antigen. J Exp Med 144:98–112

    Article  CAS  PubMed  Google Scholar 

  • Jiang J, Natarajan K, Boyd LF, Morozov GI, Mage MG, Margulies DH (2017) Crystal structure of a TAPBPR-MHC I complex reveals the mechanism of peptide editing in antigen presentation. Science 358:1064–1068

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Jones PP, Murphy D, Hewgill D, McDevitt HO (1979) Detection of a common polypeptide chain in I--A and I--E sub-region immunoprecipitates. Mol Immunol 16:51–60

    Article  PubMed  Google Scholar 

  • Kelly A, Powis S, Kerr LA, Mockridge I, Elliott T, Bastin J, Uchanska-Ziegler B, Ziegler A, Trowsdale J, Townsend A (1992) Assembly and function of the two ABC transporter proteins encoded in the human major histocompatibility complex. Nature 355:641–644

    Article  CAS  PubMed  Google Scholar 

  • Kropshofer H, Vogt A, Moldenhauer G, Hammer J, Blum JS, Hämmerling GJ (1996) Editing of the HLA-DR-peptide repertoire by HLA-DM. EMBO J 15:6144–6154

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Lamb CA, Cresswell P (1992) Assembly and transport properties of invariant chain trimers and HLA-DR-invariant chain complexes. J Immunol 148:3478–3482

    CAS  PubMed  Google Scholar 

  • Lamb CA, Yewdell J, Bennink JR, Cresswell P (1991) Invariant chain targets HLA class II molecules to acidic endosomes containing internalized influenza virus. Proc Natl Acad Sci U S A 88:5998–6002

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Lehner PJ, Surman M, Cresswell P (1998) Soluble tapasin restores MHC class I expression and function in the tapasin-negative cell line .220. Immunity 8:221–231

    Article  CAS  PubMed  Google Scholar 

  • Leonhardt RM, Abrahim P, Mitchell SM, Cresswell P (2014) Three tapasin docking sites in TAP cooperate to facilitate transporter stabilization and heterodimerization. J Immunol 192:2480–2494

    Article  CAS  PubMed  Google Scholar 

  • Li S, Sjogrenn H-O, Hellman U, Pettersson RF, Wang P (1997) Cloning and functional characterization of a subunit of the transporter associated with antigen processing. Proc Natl Acad Sci U S A 94:8708–8713

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Liljedahl M, Kuwana T, Fung-Leung WP, Jackson MR, Peterson PA, Karlsson L (1996) HLA-DO is a lysosomal resident which requires association with HLA-DM for efficient intracellular transport. EMBO J 15:4817–4824

    Article  PubMed  PubMed Central  Google Scholar 

  • Lindquist JA, Jensen ON, Mann M, Hämmerling GJ (1998) ER-60, a chaperone with thiol-dependent reductase activity involved in MHC class I assembly. EMBO J 17:2186–2195

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Lotteau V, Teyton L, Peleraux A, Nilsson T, Karlsson L, Schmid SL, Quaranta V, Peterson PA (1990) Intracellular transport of class II MHC molecules directed by invariant chain. Nature 1990:600–605

    Article  Google Scholar 

  • Lu Q, Grotzke J, Cresswell P (2018) A novel probe to assess cytosolic entry of exogenous proteins. Nat Commun 9:3104. https://doi.org/10.1038/s41467-018-05556-z

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Machamer CE, Cresswell P (1982) Biosynthesis and glycosylation of the invariant chain associated with HLA-DR antigens. J Immunol 129:2564–2569

    CAS  PubMed  Google Scholar 

  • Maric M, Arunachalam B, Phan UT, Dong C, Garrett WS, Cannon KS, Alfonso C, Karlsson L, Flavell RA, Cresswell P (2001) Defective antigen processing in GILT-free mice. Science 294:1361–1365

    Article  CAS  PubMed  Google Scholar 

  • Markert ML, Cresswell P (1980) Polymorphism of human B-cell alloantigens: evidence for three loci within the HLA system. Proc Natl Acad Sci U S A 77:6101–6104

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Marks MS, Blum JS, Cresswell P (1990) Invariant chain trimers are sequestered in the rough endoplasmic reticulum in the absence of association with HLA class II antigens. J Cell Biol 111:839–855

    Article  CAS  PubMed  Google Scholar 

  • Mellins E, Smith L, Arp B, Cotner T, Celis E, Pious D (1990) Defective processing and presentation of exogenous antigens in mutants with normal HLA class II genes. Nature 343:71–74

    Article  CAS  PubMed  Google Scholar 

  • Mellins E, Cameron P, Amaya M, Goodman S, Pious D, Smith L, Arp B (1994) A mutant human histocompatibility leukocyte antigen DR molecule associated with invariant chain peptides. J Exp Med 179:541–549

    Article  CAS  PubMed  Google Scholar 

  • Meusser B, Hirsch C, Jarosch E, Sommer T (2005) ERAD: the long road to destruction. Nature Cell Biol 8:766–772

    Article  CAS  Google Scholar 

  • Monaco JJ, Cho S, Attaya M (1990) Transport protein genes in the murine MHC: possible implications for antigen processing. Science 250:1723–1726

    Article  CAS  PubMed  Google Scholar 

  • Morozov GI, Zhao H, Mage MG, Boyd LF, Jiang J, Dolan MA, Venna R, Norcross MA, McMurtrey CP, Hildebrand W, Schuck P, Natarajan K, Margulies DH (2016) Interaction of TAPBPR, a tapasin homolog, with MHC-I molecules promotes peptide editing. Proc Natl Acad Sci U S A 2016:1006–1115

    Article  CAS  Google Scholar 

  • Morrice NA, Powis SJ (1998) A role for the thiol-dependent reductase ERp57 in the assembly of MHC class I molecules. Curr Biol 8:713–716

    Article  CAS  PubMed  Google Scholar 

  • Morris P, Shaman J, Attaya M, Amaya M, Goodman S, Bergman C, Monaco JJ, Mellins E (1994) An essential role for HLA-DM in antigen presentation by class II major histocompatibility molecules. Nature 368:551–554

    Article  CAS  PubMed  Google Scholar 

  • Neefjes JJ, Stollorz V, Peters PJ, Geuze HJ, Ploegh HL (1990) The biosynthetic pathway of MHC class II but not class I molecules intersects the endocytic route. Cell 61:171–183

    Article  CAS  PubMed  Google Scholar 

  • Neefjes JJ, Momburg F, Hämmerling GJ (1993) Selective and ATP-dependent translocation of peptides by the MHC-encoded transporter. Science 261:769–771

    Article  CAS  PubMed  Google Scholar 

  • Nijenhuis M, Hammerling G (1996) Multiple regions of the transporter associated with antigen processing (TAP) contribute to its peptide binding site. J Immunol 157:5467–5477

    CAS  PubMed  Google Scholar 

  • Norbury CC, Hewlett L, Prescott AR, Shastri N, Watts C (1995) Class I MHC presentation of exogenous soluble antigen via macropinocytosis in bone marrow macrophages. Immunity 3:783–791

    Article  CAS  PubMed  Google Scholar 

  • Orr HT, Bach F, Ploegh HL, Strominger JL, Kavathas P, DeMars R (1982) Use of HLA loss mutants to analyse the structure of the human major histocompatibility complex. Nature 296:454–456

    Article  CAS  PubMed  Google Scholar 

  • Ortmann B, Androlewicz MJ, Cresswell P (1994) MHC class I/beta 2-microglobulin complexes associate with TAP transporters before peptide binding. Nature 368:864–867

    Article  CAS  PubMed  Google Scholar 

  • Ortmann B, Copeman J, Lehner PJ, Sadasivan B, Herberg JA, Grandea AG, Riddell SR, Tampé R, Spies T, Trowsdale J, Cresswell P (1997) A critical role for tapasin in the assembly and function of multimeric MHC class I-TAP complexes. Science 277:1306–1309

    Article  CAS  PubMed  Google Scholar 

  • Paludan C, Schmid D, Landthaler M, Vockerodt M, Kube D, Tuschl T, Münz C (2005) Endogenous MHC class II processing of a viral nuclear antigen after autophagy. Science 307:593–596

    Article  CAS  PubMed  Google Scholar 

  • Panter MS, Jain A, Leonhardt RM, Ha T, Cresswell P (2012) Dynamics of major histocompatibility complex class I association with the human peptide-loading complex. J Biol Chem 2012:31172–31184

    Article  CAS  Google Scholar 

  • Parodi AJ (2000) Protein glucosylation and its role in protein folding. Ann Rev Biochem 69:69–93

    Article  CAS  PubMed  Google Scholar 

  • Peaper DR, Cresswell P (2008) The redox activity of ERp57 is not essential for its functions in MHC class I peptide loading. Proc Natl Acad Sci U S A 105:10477–10482

    Article  PubMed  PubMed Central  Google Scholar 

  • Peaper DR, Wearsch PA, Cresswell P (2005) Tapasin and ERp57 form a stable disulfide-linked dimer within the MHC class I peptide-loading complex. EMBO J 24:3613–3623

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Pos W, Sethi D, Call MJ, Schulze MS, Anders AK, Pyrdol J, Wucherpfennig KW (2012) Crystal structure of the HLA-DM-HLA-DR1 complex defines mechanisms for rapid peptide selection. Cell 151:1557–1568

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Powis SJ, Townsend AR, Deverson EV, Bastin J, Butcher GW, Howard JC (1991) Restoration of antigen presentation to the mutant cell line RMA-S by an MHC-linked transporter. Nature 354:528–531

    Article  CAS  PubMed  Google Scholar 

  • Riberdy JM, Cresswell P (1992) The antigen-processing mutant T2 suggests a role for MHC-linked genes in class II antigen presentation. J Immunol 148:2586–2590

    CAS  PubMed  Google Scholar 

  • Riberdy JM, Newcombe JR, Surman MJ, Barbosa JA, Cresswell P (1992) HLA-DR molecules from an antigen-processing mutant cell line are associated with invariant chain peptides. Nature 360:474–477

    Article  CAS  PubMed  Google Scholar 

  • Roche PA, Cresswell P (1990) Invariant chain association with HLA-DR molecules inhibits immunogenic peptide binding. Nature 345:615–618

    Article  CAS  PubMed  Google Scholar 

  • Roche PA, Marks MS, Cresswell P (1991) Formation of a nine-subunit complex by HLA class II glycoproteins and the invariant chain. Nature 354:392–394

    Article  CAS  PubMed  Google Scholar 

  • Rock KL, Gramm C, Rothstein L, Clark K, Stein R, Dick L, Hwang D, Goldberg AL (1994) Inhibitors of the proteasome block the degradation of most cell proteins and the generation of peptides presented on MHC class I molecules. Cell 78:761–767

    Article  CAS  PubMed  Google Scholar 

  • Rufer E, Leonhardt RM, Knittler MR (2007) Molecular architecture of the TAP-associated MHC class I peptide-loading complex. J Immunol 179:5717–5727

    Article  CAS  PubMed  Google Scholar 

  • Sadasivan B, Lehner PJ, Ortmann B, Spies T, Cresswell P (1996) Roles for calreticulin and a novel glycoprotein, tapasin, in the interaction of MHC class I molecules with TAP. Immunity 5:103–104

    Article  CAS  PubMed  Google Scholar 

  • Salter RD, Cresswell P (1986) Impaired assembly and transport of HLA-A and -B antigens in a mutant TxB cell hybrid. EMBO J 5:943–949

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Salter RD, Howell DN, Cresswell P (1985) Genes regulating HLA class I antigen expression in T-B lymphoblast hybrids. Immunogenetics 21:235–246

    Article  CAS  PubMed  Google Scholar 

  • Samie M, Cresswell P (2015) The transcription factor TFEB acts as a molecular switch that regulates exogenous antigen-presentation pathways. Nat Immunol 16:729–736

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Sanderson AR (1968) HL-A substances from human spleens. Nature 220:192–195

    Article  CAS  PubMed  Google Scholar 

  • Savina A, Amigorena S (2007) Phagocytosis and antigen presentation in dendritic cells. Immunol Rev 219:143–156

    Article  CAS  PubMed  Google Scholar 

  • Sette A, Ceman S, Kubo RT, Sakaguchi K, Appella E, Hunt DF, Davis TA, Michel H, Shabanowitz J, Rudersdorf R et al (1992) Invariant chain peptides in most HLA-DR molecules of an antigen-processing mutant. Science 258:1801–1804

    Article  CAS  PubMed  Google Scholar 

  • Shamu CE, Story C, Rapoport TA, Ploegh HL (1999) The pathway of US11-dependent degradation of MHC class I heavy chains involves a ubiquitin-conjugated intermediate. J Cell Biol 147:45–58

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Sherman MA, Weber DA, Jensen PE (1995) DM enhances peptide binding to class II MHC by release of invariant chain-derived peptide. Immunity 3:197–205

    Article  CAS  PubMed  Google Scholar 

  • Shimada A, Nathenson SG (1967) Solubilization of membrane H-2 isoantigens: chromatographic separation of specificities determined by a single H-2 genotype. Biochem Biophys Res Commun 29:828–833

    Article  CAS  PubMed  Google Scholar 

  • Sigal LJ, Crotty S, Andino R, Rock KL (1999) Cytotoxic T-cell immunity to virus-infected non-haematopoietic cells requires presentation of exogenous antigen. Nature 398:77–80

    Article  CAS  PubMed  Google Scholar 

  • Singh R, Cresswell P (2010) Defective cross-presentation of viral antigens in GILT-free mice. Science 328:1394–1398

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Sloan VS, Cameron P, Porter G, Gammon M, Amaya M, Mellins E, Zaller DM (1995) Mediation by HLA-DM of dissociation of peptides from HLA-DR. Nature 375:802–806

    Article  CAS  PubMed  Google Scholar 

  • Spies T, Bresnahan M, Bahram S, Arnold D, Blanck G, Mellins E, Pious D, DeMars R (1990) A gene in the human major histocompatibility complex class II region controlling the class I antigen presentation pathway. Nature 348:744–747

    Article  CAS  PubMed  Google Scholar 

  • Spies T, Cerundolo V, Colonna M, Cresswell P, Townsend A, DeMars R (1992) Presentation of viral antigen by MHC class I molecules is dependent on a putative peptide transporter heterodimer. Nature 355:644–666

    Article  CAS  PubMed  Google Scholar 

  • Springer TA, Mann DL, DeFranco AL, Strominger JL (1977) Detergent solubilization, purification, and separation of specificities of HLA antigens from a cultured human lymphoblastoid line, RPMI 4265. J Biol Chem 252:4682–4693

    CAS  PubMed  Google Scholar 

  • Strubin M, Berte C, Mach B (1986) Alternative splicing and alternative initiation of translation explain the four forms of the Ia antigen-associated invariant chain. EMBO J 5:3483–3488

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Suh WK, Cohen-Doyle M, Fruh K, Wang K, Peterson PA, Williams DB (1994) Interaction of MHC class I molecules with the transporter associated with antigen processing. Science 264:1322–1326

    Article  CAS  PubMed  Google Scholar 

  • Teng MS, Stephens R, Du Pasquier L, Freeman T, Lindquist JA, Trowsdale J (2002) A human TAPBP (TAPASIN)-related gene, TAPBP-R. Eur J Immunol 32:1059–1068

    Article  CAS  PubMed  Google Scholar 

  • Thomas C, Tampe R (2017) Structure of the TAPBPR-MHC I complex defines the mechanism of peptide loading and editing. Science 358:1060–1064

    Article  CAS  PubMed  Google Scholar 

  • Townsend AR, Rothbard J, Gotch FM, Bahadur G, Wraith D, McMichael AJ (1986) The epitopes of influenza nucleoprotein recognized by cytotoxic T lymphocytes can be defined with short synthetic peptides. Cell 44:959–968

    Article  CAS  PubMed  Google Scholar 

  • Townsend AR, Ohlen C, Bastin J, Ljunggren HG, Foster L, Kärre K (1989) Association of class I major histocompatibility heavy and light chains induced by viral peptides. Nature 340:443–448

    Article  CAS  PubMed  Google Scholar 

  • Trowsdale J, Hanson I, Mockridge I, Beck S, Townsend A, Kelly A (1990) Sequences encoded in the class II region of the MHC related to the 'ABC' superfamily of transporters. Nature 348:741–744

    Article  CAS  PubMed  Google Scholar 

  • Walker KW, Gilbert H (1997) Scanning and escape during protein-disulfide isomerase-assisted protein folding. J Biol Chem 272:8845–8848

    Article  CAS  PubMed  Google Scholar 

  • Wearsch PA, Cresswell P (2007) Selective loading of high-affinity peptides onto major histocompatibility complex class I molecules by the tapasin-ERp57 heterodimer. Nat Immunol 8:873–881

    Article  CAS  PubMed  Google Scholar 

  • Wearsch PA, Peaper DR, Cresswell P (2011) Essential glycan-dependent interactions optimize MHC class I peptide loading. Proc Natl Acad Sci U S A 108:4950–4955

    Article  PubMed  PubMed Central  Google Scholar 

  • Wei ML, Cresswell P (1992) HLA-A2 molecules in an antigen-processing mutant cell contain signal sequence-derived peptides. Nature 356:443–446

    Article  CAS  PubMed  Google Scholar 

  • Williams DB (2006) Beyond lectins: the calnexin/calreticulin chaperone system of the endoplasmic reticulum. J Cell Sci 119:615–623

    Article  CAS  PubMed  Google Scholar 

  • Ye Y, Meyer HH, Rapoport TA (2001) The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol. Nature 414:652–656

    Article  CAS  PubMed  Google Scholar 

  • Zarling AL, Luckey CJ, Marto JA, White FM, Brame CJ, Evans AM, Lehner PJ, Cresswell P, Shabanowitz J, Hunt DF, Engelhard VH (2003) Tapasin is a facilitator, not an editor, of class I MHC peptide binding. J Immunol 171:5287–5295

    Article  CAS  PubMed  Google Scholar 

  • Zhang W, Wearsch PA, Zhu Y, Leonhardt RM, Cresswell P (2011) A role for UDP-glucose glycoprotein glucosyltransferase in expression and quality control of MHC class I molecules. Proc Natl Acad Sci U S A 108:4956–4961

    Article  PubMed  PubMed Central  Google Scholar 

  • Zinkernagel RM, Doherty P (1974) Restriction of in vitro T cell-mediated cytotoxicity in lymphocytic choriomeningitis within a syngeneic or semiallogeneic system. Nature 248:701–702

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

As stated at the outset, all progress would have been impossible without the contributions of the many students and postdoctoral fellows who have passed through my laboratory. Their hard work, creativity, dedication, and love of science made it all possible. My own mentors, the late Arnold Sanderson, Jack Strominger and, in particular, my role model at Duke, the late Bernard Amos, were all critical in their different ways to the development of my career. I also would like to express my appreciation to the dedicated technicians who made things work over the years and to the administrative staff who compensated for my organizational inadequacies. And of course, without 25 years of funding from the Howard Hughes Medical Institute and continuous funding since 1974 from the National Institute of Allergy and Infectious Diseases, my life would have taken quite a different turn. Finally, if this work seems far removed from an exercise in modesty, I would like all blame to be directed at Martin Flajnik for generously extending the invitation.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Peter Cresswell.

Additional information

Publisher’s note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

This article is part of the Topical Collection on Biology and Evolution of Antigen Presentation

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Cresswell, P. A personal retrospective on the mechanisms of antigen processing. Immunogenetics 71, 141–160 (2019). https://doi.org/10.1007/s00251-018-01098-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00251-018-01098-2

Keywords

Navigation