Patients with advanced cancer are burdened physically and psychologically, so there is an urgent need to pay more attention to their health-related quality of life (HRQOL). With an expected clinical endpoint prediction, over-treatment can be effectively eliminated by the means of palliative care at the right time. This paper develops a deep learning based approach for cancer clinical endpoint prediction

Objectives Lung cancer is the leading cause of cancer death worldwide. Prognosis of lung cancer plays a crucial role in the clinical decision-making process to optimize the treatment for patients. Most of the existing data-driven prognostic prediction models explore the relations between patient’s characteristics and outcomes at a specific time interval. Although valuable, they neglect the relations

Blood glycemic control is crucial for minimizing severe side effects in Diabetes Mellitus. Currently, two opposing treatment approaches exist: In formulaic methods, insulin care is calculated by parameter-based computation (i.e., correction factor, insulin-to-carb ratio, and absorption duration), which are fixed by the medical team based on the history of a tested patient Blood Glucose Levels (BGL)

Continuous blood pressure (BP) measurement is crucial for reliable and timely hypertension detection. State-of-the-art continuous BP measurement methods based on pulse transit time or multiple parameters require simultaneous electrocardiogram (ECG) and photoplethysmogram (PPG) signals. Compared with PPG signals, ECG signals are easy to collect using wearable devices. This study examined a novel continuous

Recognition of Activities of Daily Living (ADL) is an essential component of assisted living systems based on actigraphy. This task can nowadays be performed by machine learning models which are able to automatically extract and learn relevant features but, most of time, need to be trained with large amounts of data collected on several users. In this paper, we propose an approach to learn personalized

Patients suffering from Barrett's Esophagus (BE) are at an increased risk of developing esophageal adenocarcinoma and early detection is crucial for a good prognosis. To aid the endoscopists with the early detection for this preliminary stage of esophageal cancer, this work concentrates on the development and extensive evaluation of a state-of-the-art computer-aided classification and localization

Computer-aided detection (CADe) systems play a crucial role in pulmonary nodule detection via chest radiographs (CXRs). A two-stage CADe scheme usually includes nodule candidate detection and false positive reduction. A pure deep learning model, such as faster region convolutional neural network (faster R-CNN), has been successfully applied for nodule candidate detection via computed tomography (CT)

Regular medical records are useful for medical practitioners to analyze and monitor patient's health status especially for those with chronic disease. However, such records are usually incomplete due to unpunctuality and absence of patients. In order to resolve the missing data problem over time, tensor-based models have been developed for missing data imputation in recent papers. This approach makes

Traumatic brain injury (TBI) is a major cause of death and disability worldwide. Automated brain hematoma segmentation and outcome prediction for patients with TBI can effectively facilitate patient management. In this study, we propose a novel Multi-view convolutional neural network with a mixed loss to segment total acute hematoma on head CT scans collected within 24 h after the injury. Based on

Erythropoiesis Stimulating Agents (ESAs) have become a standard anemia management tool for End Stage Renal Disease (ESRD) patients. However, dose optimization constitutes an extremely challenging task due to huge inter and intra-patient variability in the responses to ESA administration. Current data-based approaches to anemia control focus on learning accurate hemoglobin prediction models, which can

Healthcare industry is the leading domain that has been revolutionized by the incorporation of Internet of Things (IoT) technology resulting in smart medical applications. Conspicuously, this study presents an effective system of home-centric Urine-based Diabetes (UbD) monitoring system. Specifically, the proposed system comprises of 4-layers for predicting and monitoring diabetes-oriented urine infection

Objective The aim of this study is to compute similarities between patient records in an electronic health record (EHR). This is an important problem because the availability of effective methods for the computation of patient similarity would allow for assistance with and automation of tasks such as patients stratification, medical prognosis and cohort selection, and for unlocking the potential of

Bayesian networks (BNs) have received increasing research attention that is not matched by adoption in practice and yet have potential to significantly benefit healthcare. Hitherto, research works have not investigated the types of medical conditions being modelled with BNs, nor whether there are any differences in how and why they are applied to different conditions. This research seeks to identify

The problem of the explainability of AI decision-making has attracted considerable attention in recent years. In considering AI diagnostics we suggest that explainability should be explicated as ‘effective contestability’. Taking a patient-centric approach we argue that patients should be able to contest the diagnoses of AI diagnostic systems, and that effective contestation of patient-relevant aspect

In this paper, we embed two types of attention modules in the dilated fully convolutional network (FCN) to solve biomedical image segmentation tasks efficiently and accurately. Different from previous work on image segmentation through multiscale feature fusion, we propose the fully convolutional attention network (FCANet) to aggregate contextual information at long-range and short-range distances

Significant progress has been achieved in recent years in the application of artificial intelligence (AI) for medical decision support. However, many AI-based systems often only provide a final prediction to the doctor without an explanation of its underlying decision-making process. In scenarios concerning deadly diseases, such as breast cancer, a doctor adopting an auxiliary prediction is taking

Infection of bone, osteomyelitis (OM), is a serious bacterial infection in children requiring urgent antibiotic therapy. While biological specimens are often obtained and cultured to guide antibiotic selection, culture results may take several days, are often falsely negative, and may be falsely positive because of contamination by non-causative bacteria. This poses a dilemma for clinicians when choosing

Atrial Fibrillation (AF) at an early stage has a short duration and is sometimes asymptomatic, making it difficult to detect. Although the use of mobile sensing devices has provided the possibility of real-time cardiac detection, it is highly susceptible to the noise signals generated by body movement. Therefore, it is of great importance to study early AF detection for mobile terminals with noise

Pap smear is often employed as a screening test for diagnosing cervical pre-cancerous and cancerous lesions. Accurate identification of dysplastic changes amongst the cervical cells in a Pap smear image is thus essential for rapid diagnosis and prognosis. Manual pathological observations used in clinical practice require exhaustive analysis of thousands of cell nuclei in a whole slide image to visualize

Learning a Bayesian network is a difficult and well known task that has been largely investigated. To reduce the number of candidate graphs to test, some authors proposed to incorporate a priori expert knowledge. Most of the time, this a priori information between variables influences the learning but never contradicts the data. In addition, the development of Bayesian networks integrating time such

The topic of sparse representation of samples in high dimensional spaces has attracted growing interest during the past decade. In this work, we develop sparse representation-based methods for classification of clinical imaging patterns into healthy and diseased states. We propose a spatial block decomposition method to address irregularities of the approximation problem and to build an ensemble of

In current breast ultrasound computer aided diagnosis systems, the radiologist preselects a region of interest (ROI) as an input for computerised breast ultrasound image analysis. This task is time consuming and there is inconsistency among human experts. Researchers attempting to automate the process of obtaining the ROIs have been relying on image processing and conventional machine learning methods

Accurate diagnoses of specific diseases require, in general, the review of the whole medical history of a patient. Currently, even though many advances have been made for disease monitoring, domain experts are still requested to perform direct analyses in order to get a precise classification, thus implying significant efforts and costs. In this work we present a framework for automated diagnosis based

Background Health utilities express the perceptions patients have on the impact potential adverse events of medical treatments may have on their quality of life. Being able to accurately assess health utilities is crucial when deciding what is the best treatment when multiple and diverse treatment options exist, or when performing a cost / utility analysis. Due to the emotional and other complexities

Background Two common issues may arise in certain population-based breast cancer (BC) survival studies: I) missing values in a survivals’ predictive variable, such as “Stage” at diagnosis, and II) small sample size due to “imbalance class problem” in certain subsets of patients, demanding data modeling/simulation methods. Methods We present a procedure, ModGraProDep, based on graphical modeling (GM)

Graph signal processing (GSP) is a framework that enables the generalization of signal processing to multivariate signals described on graphs. In this paper, we present an approach based on Graph Fourier Transform (GFT) and machine learning for the analysis of resting-state functional magnetic resonance imaging (rs-fMRI). For each subject, we use rs-fMRI time series to compute several descriptive statistics

Window settings to rescale and contrast stretch raw data from radiographic images such as Computed Tomography (CT), X-ray and Magnetic Resonance images is a crucial step as data pre-processing to examine abnormalities and diagnose diseases. We propose a distant-supervised method for determining automatically the best window settings by attaching a window estimator module (WEM) to a deep convolutional

The clinical assessment after stroke depends on the rating scale, usually lack of quantitative feedback such as biomedical signal captured from stroke patients. This study attempts to develop a unified assessment framework for persons after stroke via surface electromyography (sEMG) bias from bilateral limbs, based on four types of selected movements, namely forward lift arm, lateral lift arm, forearm

Cardiovascular diseases (CVD) is the leading cause of human mortality and morbidity around the world, in which myocardial infarction (MI) is a silent condition that irreversibly damages the heart muscles. Currently, electrocardiogram (ECG) is widely used by the clinicians to diagnose MI patients due to its inexpensiveness and non-invasive nature. Pathological alterations provoked by MI cause slow conduction

High-resolution (HR) medical images are preferred in clinical diagnoses and subsequent analysis. However, the acquisition of HR medical images is easily affected by hardware devices. As an effective and trusted alternative method, the super-resolution (SR) technology is introduced to improve the image resolution. Compared with traditional SR methods, the deep learning-based SR methods can obtain more

A major challenge in gene regulatory networks (GRN) of biological systems is to discover when and what interventions should be applied to shift them to healthy phenotypes. A set of gene activity profiles, called basin of attraction (BOA), takes this network to a specific phenotype; therefore, a healthy BOA leads the GRN to a healthy phenotype. However, without the complete observability of the genes

Optical coherence tomography (OCT) is a rapidly developing non-invasive three dimensional imaging approach, and it has been widely used in examination and diagnosis of eye diseases. However, speckle noise are often inherited from image acquisition process, and may obscure the anatomical structure, such as the retinal layers. In this paper, we propose a novel method to reduce the speckle noise in 3D

Substantial progress has been made towards implementing automated radiology reporting models based on deep learning (DL). This is due to the introduction of large medical text/image datasets. Generating radiology coherent paragraphs that do more than traditional medical image annotation, or single sentence-based description, has been the subject of recent academic attention. This presents a more practical

Automatic arrhythmia detection based on electrocardiogram (ECG) is of great significance for early prevention and diagnosis of cardiac diseases. Recently, deep learning methods have been applied to arrhythmia detection and obtained great success. Among them, convolutional neural network (CNN) is an effective method for extracting features due to its local connectivity and parameter sharing. In addition

The increasing access to brain signal data using electroencephalography creates new opportunities to study electrophysiological brain activity and perform ambulatory diagnoses of neurological disorders. This work proposes a pairwise distance learning approach for schizophrenia classification relying on the spectral properties of the signal. To be able to handle clinical trials with a limited number

Magnetic resonance imaging (MRI) has proved to be an invaluable component of pathogenesis research in osteoarthritis. Nevertheless, the detection of a meniscal lesion from magnetic resonance (MR) images is always challenging for both clinicians and researchers, because the surrounding tissues lead to similar signals within MR measurements, thus being difficult to discriminate. Moreover, the size and

In this paper, we review the state-of-the-art approaches for knee articular cartilage segmentation from conventional techniques to deep learning (DL) based techniques. Knee articular cartilage segmentation on magnetic resonance (MR) images is of great importance in early diagnosis of osteoarthritis (OA). Besides, segmentation allows estimating the articular cartilage loss rate which is utilised in

Early prediction of target patients at high risk of developing Type 2 diabetes (T2D) plays a significant role in preventing the onset of overt disease and its associated comorbidities. Although fundamental in early phases of T2D natural history, insulin resistance is not usually quantified by General Practitioners (GPs). Triglyceride-glucose (TyG) index has been proven useful in clinical studies for

Nowadays, the Unified Parkinson Disease Rating Scale supported by the Movement Disorder Society (MDS-UPDRS), is a standardized and widely accepted instrument to rate Parkinson’s disease (PD). This work presents a thorough analysis of item 3.6 of the MDS-UPDRS scale which corresponds to the pronation and supination hand movements. The motivation for this work lies in the objective quantification of

Kawasaki disease (KD) is the leading cause of acquired heart disease in children. Its prompt treatment can effectively lower the risk of severe complications, such as coronary aneurysms. However, accurately diagnosing KD at its early stage is impracticable given its unknown pathogenesis and lack of pathognomonic features. In this study, we investigated data-driven approaches by using a cohort of 10

The automatic extraction of a patient’s natural history from Electronic Health Records (EHRs) is a critical step towards building intelligent systems that can reason about clinical variables and support decision making. Although EHRs contain a large amount of valuable information about the patient’s medical care, this information can only be fully understood when analyzed in a temporal context. Any

Minimal path method has been widely recognized as an efficient tool for extracting vascular structures in medical imaging. In a previous paper, a method termed minimal path propagation with backtracking (MPP-BT) was derived to deal with curve-like structures such as vessel centerlines. A robust approach termed CMPP (constrained minimal path propagation) is here proposed to extend this work. The proposed

Currently, breast cancer diagnosis is an extensively researched topic. An effective method to diagnose breast cancer is to use histopathological images. However, extracting features from these images is a challenging task. Thus, we propose a method that uses phylogenetic diversity indexes to characterize images for creating a model to classify histopathological breast images into four classes – invasive

Physiological signals can be utilized to monitor conditions of a driver, but the inter-subject variance of physiological signals can degrade the classification accuracy of the monitoring system. Personalization of the system using the data of a tested subject, called local data, can be a solution, but the acquisition of sufficient local data may not be possible in real situations. Therefore, this paper

Antimicrobial resistance has become one of the most important health problems and global action plans have been proposed globally. Prevention plays a key role in these actions plan and, in this context, we propose the use of Artificial Intelligence, specifically Time Series Forecasting techniques, for predicting future outbreaks of Methicilin-resistant Staphylococcus aereus (MRSA). Infection incidence

Pregnancy is a complex process, and the prediction of premature birth is uncertain. Many researchers are exploring non-invasive approaches to enhance its predictability. Currently, the ElectroHysteroGram (EHG) and Tocography (TOCO) signal are a real-time and non-invasive technology which can be employed to predict preterm birth. For this purpose, sparse autoencoder (SAE) based deep neural network (SAE-based

In this work we describe the application of a careflow mining algorithm to detect the most frequent patterns of care in a cohort of 3000 breast cancer patients. The applied method relies on longitudinal data extracted from electronic health records, recorded from the first surgical procedure after a breast cancer diagnosis. Careflows are mined from events data recorded for administrative purposes,

Motivation Breast cancer is the leading cause of cancer deaths among women today. Survival rates in developing countries are around 50%–60% due to late detection. A personalized, accurate risk scoring method can help in targeting the right population for follow-up tests and enables early detection of breast abnormalities. Most of the available risk assessment tools use generic and weakly correlated

Background Digital health interventions based on tools for Computerized Decision Support (CDS) and Machine Learning (ML), which take advantage of new information, sensing and communication technologies, can play a key role in childhood obesity prevention and treatment. Objectives We present a systematic literature review of CDS and ML applications for the prevention and treatment of childhood obesity

Objectives: Probabilistic modeling of a patient's situation with the goal of providing calculated therapy recommendations can improve the decision making of interdisciplinary teams. Relevant information entities and direct causal dependencies, as well as uncertainty, must be formally described. Possible therapy options, tailored to the patient, can be inferred from the clinical data using these descriptions

Explainable AI aims at building intelligent systems that are able to provide a clear, and human understandable, justification of their decisions. This holds for both rule-based and data-driven methods. In management of chronic diseases, the users of such systems are patients that follow strict dietary rules to manage such diseases. After receiving the input of the intake food, the system performs reasoning

Globally, methods of controlling blood pressure in hypertension patients remain inefficient. The difficulty of prescribing appropriate drugs specific to a patient’s clinical features serves as one of the most important factors. Characterizing the critical drug-related features, just like that of the antibacterial spectrum (where each item is sensitive to the targeted drug’s effectiveness or a specified

Brain MR images are composed of three main regions such as gray matter, white matter and cerebrospinal fluid. Radiologists and medical practitioners make decisions through evaluating the developments in these regions. Study of these MR images suffers from two major issues such as: (a) the boundaries of their gray matter and white matter regions are ambiguous and unclear in nature, and (b) their regions

Adverse Drug Events (ADEs) may occur and lead to severe consequences for the public, even though clinical trials are conducted in the stage of pre-market. Computational methods are still needed to fulfil the task of pharmacosurveillance. In post-market surveillance, the Spontaneous Reporting System (SRS) has been widely used to detect suspicious associations between medicines and ADEs. However, the

Objective: According to a meta-analysis of 7 studies, the median number of patients with at least one adverse event during the surgery is 14.4%, and a third of those adverse events were preventable. The occurrence of adverse events forces surgeons to implement corrective strategies and, thus, deviate from the standard surgical process. Therefore, it is clear that the automatic identification of adverse

Knowledge discovery from omics data has become a common goal of current approaches to personalised cancer medicine and understanding cancer genotype and phenotype. However, high-throughput biomedical datasets are characterised by high dimensionality and relatively small sample sizes with small signal-to-noise ratios. Extracting and interpreting relevant knowledge from such complex datasets therefore