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A theoretical and generalized approach for the assessment of the sample-specific limit of detection for clinical metagenomics Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-26 Arnt Ebinger; Susanne Fischer; Dirk Höper
Metagenomics is a powerful tool to identify novel or unexpected pathogens, since it is generic and relatively unbiased. The limit of detection (LOD) is a critical parameter for the routine application of methods in the clinical diagnostic context. Although attempts for the determination of LODs for metagenomics next-generation sequencing (mNGS) have been made previously, these were only applicable
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Can constraint network analysis guide the identification phase of KnowVolution? A case study on improved thermostability of an endo-β-glucanase Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-28 Francisca Contreras; Christina Nutschel; Laura Beust; Mehdi D. Davari; Holger Gohlke; Ulrich Schwaneberg
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Unraveling the molecular basis of host cell receptor usage in SARS-CoV-2 and other human pathogenic β-CoVs Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-12 Camila Pontes; Victoria Ruiz-Serra; Rosalba Lepore; Alfonso Valencia
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Meta-analysis of transcriptome datasets: An alternative method to study IL-6 regulation in coronavirus disease 2019 Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-18 Hui Liu; Shujin Lin; Xiulan Ao; Xiangwen Gong; Chunyun Liu; Dechang Xu; Yumei Huang; Zhiqiang Liu; Bixing Zhao; Xiaolong Liu; Xiao Han; Hanhui Ye
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Evolution of bacteria in the human gut in response to changing environments: An invisible player in the game of health Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-11 Aarushi Venkatakrishnan; Zoie E. Holzknecht; Rob Holzknecht; Dawn E. Bowles; Sanet H. Kotzé; Jennifer L. Modliszewski; William Parker
Several factors in Western society, including widespread use of antibiotics, chronic inflammation, and loss of complex eukaryotic symbionts such as helminths, have a dramatic impact on the ecosystem of the gut, affecting the microbiota hosted there. In addition, reductions in dietary fiber are profoundly impactful on the microbiota, causing extensive destruction of the niche space that supports the
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Targeting evolution of antibiotic resistance by SOS response inhibition Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-11 Alexander Yakimov; Irina Bakhlanova; Dmitry Baitin
Antibiotic resistance is acquired in response to antibiotic therapy by activating SOS-depended mutagenesis and horizontal gene transfer pathways. Compounds able to inhibit SOS response are extremely important to develop new combinatorial strategies aimed to block mutagenesis. The regulators of homologous recombination involved in the processes of DNA repair should be considered as potential targets
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Multi-omics approaches in cancer research with applications in tumor subtyping, prognosis, and diagnosis Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-22 Otília Menyhárt; Balázs Győrffy
While cost-effective high-throughput technologies provide an increasing amount of data, the analyses of single layers of data seldom provide causal relations. Multi-omics data integration strategies across different cellular function levels, including genomes, epigenomes, transcriptomes, proteomes, metabolomes, and microbiomes offer unparalleled opportunities to understand the underlying biology of
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Review on circular RNAs and new insights into their roles in cancer Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-22 Xiaozhu Tang; Hongyan Ren; Mengjie Guo; Jinjun Qian; Ye Yang; Chunyan Gu
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Structure-Based Peptide Design Targeting Intrinsically Disordered Proteins: Novel Histone H4 and H2A Peptidic Inhibitors Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-21 Kanin Wichapong; Carlos Silvestre-Roig; Quinte Braster; Ariane Schumski; Oliver Soehnlein; Gerry A. F. Nicolaes
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Understanding response of microbial communities to saltwater intrusion through microcosms Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-21 Dandan Izabel-Shen
A central pursuit of microbial ecology is to accurately describe and explain the shifts in microbial community composition and function that occur in response to environmental changes. This goal requires a thorough understanding of the individual responses of different species and of the processes guiding the assembly of microbial populations similar in their response traits and corresponding functional
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Systems biology analysis identifies TNFRSF9 as a functional marker of tumor-infiltrating regulatory T-cell enabling clinical outcome prediction in lung cancer Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-21 Jae-Won Cho; Jimin Son; Sang-Jun Ha; Insuk Lee
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Discovery of the EL-0052 as a potential anesthetic drug Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-08 Jun-hao Jiang; Xiang-qing Xu; Wen-gao Jiang; Tao Wang; Xin Liu; Ling-guo Zeng; Jian Liao; Jing-ya Xiu; Yi Shen; Ping Deng; Qin-geng Li
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Toxoplasma and Eimeria co-opt the host cFos expression for intracellular development in mammalian cells Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-06 Bingjian Ren; Manuela Schmid; Mattea Scheiner; Hans-Joachim Mollenkopf; Richard Lucius; Emanuel Heitlinger; Nishith Gupta
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Managing children with brain tumors during the COVID-19 era: Don’t stop the care! Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-12 Michele Antonio Capozza; Silvia Triarico; Giorgio Attinà; Alberto Romano; Stefano Mastrangelo; Palma Maurizi; Paolo Frassanito; Federico Bianchi; Tommaso Verdolotti; Marco Gessi; Mario Balducci; Luca Massimi; Gianpiero Tamburrini; Antonio Ruggiero
The COVID-19 pandemic has substantially stressed health care systems globally, subsequently reducing cancer care services and delaying treatments. Pediatric populations infected by COVID-19 have shown mild clinical symptoms compared to adults, perhaps due to decreased susceptibility. Several scientific societies and governments have released information on the management of patients with cancer, wherein
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The impact of episporic modification of Lichtheimia corymbifera on virulence and interaction with phagocytes Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-20 Mohamed I. Abdelwahab Hassan; Monique Keller; Michael Hillger; Ulrike Binder; Stefanie Reuter; Kristina Herold; Anusha Telagathoti; Hans-Martin Dahse; Saiedeh Wicht; Nora Trinks; Sandor Nietzsche; Tanja Deckert-Gaudig; Volker Deckert; Ralf Mrowka; Ulrich Terpitz; Hans Peter Saluz; Kerstin Voigt
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Hybrid method for representing ions in implicit solvation calculations Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-20 Shengjie Sun; Chitra Karki; Yixin Xie; Yuejiao Xian; Wenhan Guo; Bruce Z. Gao; Lin Li
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An extracellular lipase from Amycolatopsis mediterannei is a cutinase with plastic degrading activity Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-20 Yeqi Tan; Gary T. Henehan; Gemma K. Kinsella; Barry J. Ryan
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RESTAMP - Rate estimates by sequence-tag analysis of microbial populations Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-19 Anel Mahmutovic; Aaron Gillman; Silje Lauksund; Natasha-Anne Robson Moe; Aime Manzi; Merete Storflor; Pia Abel zur Wiesch; Sören Abel
Microbial division rates determine the speed of mutation accumulation and thus the emergence of antimicrobial resistance. Microbial death rates are affected by antibiotic action and the immune system. Therefore, measuring these rates has advanced our understanding of host-pathogen interactions and antibiotic action. Several methods based on marker-loss or few inheritable neutral markers exist that
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Molecular Basis of Ice-Binding and Cryopreservation Activities of Type III Antifreeze Proteins Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-19 Seo-Ree Choi; Jaewang Lee; Yeo-Jin Seo; Hyun Sun Kong; Minjae Kim; EonSeon Jin; Jung Ryeol Lee; Joon-Hwa Lee
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ResiDB: an automated database manager for sequence data Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-19 Michaela Hendling; Rick Conzemius; Ivan Barišić
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Automated methods for cell type annotation on scRNA-seq data Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-19 Giovanni Pasquini; Jesus Eduardo Rojo Arias; Patrick Schäfer; Volker Busskamp
The advent of single-cell sequencing started a new era of transcriptomic and genomic research, advancing our knowledge of the cellular heterogeneity and dynamics. Cell type annotation is a crucial step in analyzing single-cell RNA sequencing data, yet manual annotation is time-consuming and partially subjective. As an alternative, tools have been developed for automatic cell type identification. Different
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Mathematical modeling of depressive disorders: Circadian driving, bistability and dynamical transitions Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-11-21 Xiaoou Cheng; Maria R. D’Orsogna; Tom Chou
The hypothalamus–pituitary–adrenal (HPA) axis is a key neuroendocrine system implicated in stress response, major depression disorder, and post-traumatic stress disorder. We present a new, compact dynamical systems model for the response of the HPA axis to external stimuli, representing stressors or therapeutic intervention, in the presence of a circadian input. Our work builds upon previous HPA axis
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Plant Cell Wall Architecture Guided Design of CBM3-GH11 Chimeras with Enhanced Xylanase Activity using a Tandem Repeat Left-handed β-3-Prism Scaffold Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-16 Matheus P. Pinheiro; Renata A. G. Reis; Paul Dupree; Richard J. Ward
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Integration of pre-surgical blood test results predict Microvascular Invasion Risk in Hepatocellular Carcinoma Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-16 Geng Chen; Rendong Wang; Chen Zhang; Lijia Gui; Yuan Xue; Xianlin Ren; Zhenli Li; Sijia Wang; Zhenxi Zhang; Jing Zhao; Huqing Zhang; Cuiping Yao; Jing Wang; Jingfeng Liu
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Identification of potential descriptors of water-soluble fullerene derivatives responsible for antitumor effects on lung cancer cells via QSAR analysis Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-16 Hung-Jin Huang; Margarita Chetyrkina; Chui-Wei Wong; Olga A. Kraevaya; Alexander V. Zhilenkov; Ilya I. Voronov; Pei-Hwa Wang; Pavel A. Troshin; Shan-hui Hsu
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Ecological Distribution and Potential Roles of Woesearchaeota in Anaerobic Biogeochemical Cycling Unveiled by Genomic Analysis Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-16 Xiaobo Liu; Ji-Dong Gu
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Comparative host transcriptome in response to pathogenic fungi identifies common and species-specific transcriptional antifungal host response pathways Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-26 Mariolina Bruno; Intan M.W. Dewi; Vicky Matzaraki; Rob ter Horst; Marina Pekmezovic; Berenice Rösler; Laszlo Groh; Rutger J. Röring; Vinod Kumar; Yang Li; Agostinho Carvalho; Mihai G. Netea; Jean-Paul Latgé; Mark S. Gresnigt; Frank L. van de Veerdonk
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Identification and characterisation of putative drug binding sites in human ATP-binding cassette B5 (ABCB5) transporter Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-30 Lokeswari P. Tangella; Mahreen Arooj; Evelyne Deplazes; Elin S. Gray; Ricardo L. Mancera
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Genomic pan-cancer classification using image-based deep learning Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-15 Taoyu Ye; Sen Li; Yang Zhang
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Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-06 Lidia Ruiz; Zuzanna Kaczmarska; Tiago Gomes; Eric Aragon; Carles Torner; Regina Freier; Blazej Baginski; Pau Martin-Malpartida; Natàlia de Martin Garrido; José. A. Marquez; Tiago N. Cordeiro; Radoslaw Pluta; Maria J. Macias
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Computational design of noncanonical amino acid-based thioether staples at N/C-terminal domains of multi-modular pullulanase for thermostabilization in enzyme catalysis Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-05 Jiahua Bi; Xiaoran Jing; Lunjie Wu; Xia Zhou; Jie Gu; Yao Nie; Yan Xu
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Interpopulation differences of retroduplication variations (RDVs) in rice retrogenes and their phenotypic correlations Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-05 Haiyue Zeng; Xingyu Chen; Hongbo Li; Jun Zhang; Zhaoyuan Wei; Yi Wang
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Novel coronavirus disease (COVID-19) pandemic: A recent mini review Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-31 Muhammad Fayyaz ur Rehman; Chaudhary Fariha; Aqsa Anwar; Naveed Shahzad; Munir Ahmad; Salma Mukhtar; Muhammad Farhan Ul Haque
The COVID-19, caused by a novel coronavirus, was declared as a global pandemic by WHO more than five months ago, and we are still experiencing a state of global emergency. More than 74.30 million confirmed cases of the COVID-19 have been reported globally so far, with an average fatality rate of almost 3.0%. Seven different types of coronaviruses had been detected from humans; three of them have resulted
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Skin microbiome transplantation and manipulation: Current state of the art Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-04 Chris Callewaert; Nastassia Knödlseder; Ante Karoglan; Marc Güell; Bernhard Paetzold
Many skin conditions are associated with an imbalance in the skin microbiome. In recent years, the skin microbiome has become a hot topic, for both therapeutic and cosmetic purposes. The possibility of manipulating the human skin microbiome to address skin conditions has opened exciting new paths for therapy. Here we review the skin microbiome manipulation strategies, ranging from skin microbiome transplantation
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Estimating the accuracy of calculated electron paramagnetic resonance hyperfine couplings for a lytic polysaccharide monooxygenase Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-20 Yusuf A. Theibich; Stephan P.A. Sauer; Leila Lo Leggio; Erik D. Hedegård
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The ecology of plasmid-coded antibiotic resistance: a basic framework for experimental research and modeling Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Martin Zwanzig
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The thermodynamics of cognition: A Mathematical Treatment Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2021-01-12 Eva Deli; James Peters; Zoltan Kisvarday
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Improved noninvasive fetal variant calling using standardized benchmarking approaches Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-31 Tom Rabinowitz; Shira Deri-Rozov; Noam Shomron
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Computational design of SARS-CoV-2 spike glycoproteins to increase immunogenicity by T cell epitope engineering Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-31 Edison Ong; Xiaoqiang Huang; Robin Pearce; Yang Zhang; Yongqun He
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Gut microbiome mediates host genomic effects on phenotypes: a case study with fat deposition in pigs Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-30 Francesco Tiezzi; Justin Fix; Clint Schwab; Caleb Shull; Christian Maltecca
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Virulence factor-related gut microbiota genes and immunoglobulin A levels as novel markers for machine learning-based classification of autism spectrum disorder Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Mingbang Wang; Ceymi Doenyas; Jing Wan; Shujuan Zeng; Chunquan Cai; Jiaxiu Zhou; Yanqing Liu; Zhaoqing Yin; Wenhao Zhou
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Intense bitterness of molecules: Machine learning for expediting drug discovery Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-25 Eitan Margulis; Ayana Dagan-Wiener; Robert S. Ives; Sara Jaffari; Karsten Siems; Masha Y. Niv
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A control theoretic three timescale model for analyzing energy management in mammalian cancer cells Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Abhijit Dasgupta; Abhisek Bakshi; Nirmalya Chowdhury; Rajat K. De
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Active phase prebiotic feeding alters gut microbiota, induces weight-independent alleviation of hepatic steatosis and serum cholesterol in high-fat diet-fed mice Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-24 Shreya Ghosh; Xin Yang; Linghua Wang; Chenhong Zhang; Liping Zhao
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Computational modelling supports that dengue virus envelope antibodies can bind to SARS-CoV-2 receptor binding sites: Is pre-exposure to dengue virus protective against COVID-19 severity? Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Himadri Nath; Abinash Mallick; Subrata Roy; Soumi Sukla; Subhajit Biswas
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Spontaneous binding of potential COVID-19 drugs (Camostat and Nafamostat) to human serine protease TMPRSS2 Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-28 Haixia Zhu; Wenhao Du; Menghua Song; Qing Liu; Andreas Herrmann; Qiang Huang
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The mitogenomes of two saprophytic Boletales species (Coniophora) reveals intron dynamics and accumulation of plasmid-derived and non-conserved genes Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-30 Peng Wu; Zhijie Bao; Wenying Tu; Lijiao Li; Chuan Xiong; Xin Jin; Ping Li; Mingying Gui; Wenli Huang; Qiang Li
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Structure and compositional analysis of aluminum oxyhydroxide adsorbed pertussis vaccine Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-23 Jessica Duprez; Kristen Kalbfleisch; Sasmit Deshmukh; Jessie Payne; Manjit Haer; Wayne Williams; Ibrahim Durowoju; Marina Kirkitadze
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Nasal microbiome research in ANCA-associated vasculitis: Strengths, limitations, and future directions Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-27 Andreas Kronbichler; Ewan M. Harrison; Josef Wagner
The human nasal microbiome is characterized by biodiversity and undergoes changes during the span of life. In granulomatosis with polyangiitis (GPA), the persistent nasal colonization by Staphylococcus aureus (S. aureus) assessed by culture-based detection methods has been associated with increased relapse frequency. Different research groups have characterized the nasal microbiome in patients with
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Exploiting cheminformatic and machine learning to navigate the available chemical space of potential small molecule inhibitors of SARS-CoV-2 Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Abhinit Kumar; Saurabh Loharch; Sunil Kumar; Rajesh P. Ringe; Raman Parkesh
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Microbial risk assessment of Nocardia cyriacigeorgica in polluted environments, case of urban rainfall water Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Florian Vautrin; Petar Pujic; Christian Paquet; Emmanuelle Bergeron; Delphine Mouniée; Thierry Marchal; Hélène Salord; Jeanne-Marie Bonnet; Benoit Cournoyer; Thierry Winiarski; Vanessa Louzier; Veronica Rodriguez-Nava
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Experimental and bioinformatics considerations in cancer application of single cell genomics Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-23 Joanna Hui Juan Tan; Say Li Kong; Joyce A. Tai; Huay Mei Poh; Fei Yao; Yee Yen Sia; Edwin Kok Hao Lim; Angela Maria Takano; Daniel Shao-Weng Tan; Asif Javed; Axel M. Hillmer
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FIREcaller: Detecting frequently interacting regions from Hi-C data Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Cheynna Crowley; Yuchen Yang; Yunjiang Qiu; Benxia Hu; Armen Abnousi; Jakub Lipiński; Dariusz Plewczyński; Di Wu; Hyejung Won; Bing Ren; Ming Hu; Yun Li
Hi-C experiments have been widely adopted to study chromatin spatial organization, which plays an essential role in genome function. We have recently identified frequently interacting regions (FIREs) and found that they are closely associated with cell-type-specific gene regulation. However, computational tools for detecting FIREs from Hi-C data are still lacking. In this work, we present FIREcaller
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Synthetic gut microbiome: Advances and challenges Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-24 Humphrey A. Mabwi; Eunjung Kim; Dae-Geun Song; Hyo Shin Yoon; Cheol-Ho Pan; Erick.V.G. Komba; GwangPyo Ko; Kwang Hyun Cha
An exponential rise in studies regarding the association among human gut microbial communities, human health, and diseases is currently attracting the attention of researchers to focus on human gut microbiome research. However, even with the ever-growing number of studies on the human gut microbiome, translation into improved health is progressing slowly. This hampering is due to the complexities of
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Tackling microbial threats in agriculture with integrative imaging and computational approaches Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Nikhil Kumar Singh; Anik Dutta; Guido Puccetti; Daniel Croll
Pathogens and pests are one of the major threats to agricultural productivity worldwide. For decades, targeted resistance breeding was used to create crop cultivars that resist pathogens and environmental stress while retaining yields. The often decade-long process of crossing, selection, and field trials to create a new cultivar is challenged by the rapid rise of pathogens overcoming resistance. Similarly
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The impact of Gag non-cleavage site mutations on HIV-1 viral fitness from integrative modelling and simulations Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-23 Firdaus Samsudin; Samuel Ken-En Gan; Peter J. Bond
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Towards understanding the messengers of extracellular space: Computational models of outside-in integrin reaction networks Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Zeynep Karagöz; Laura Rijns; Patricia Y.W. Dankers; Martijn van Griensven; Aurélie Carlier
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Deimmunization of protein therapeutics – Recent advances in experimental and computational epitope prediction and deletion Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-29 Léa V. Zinsli; Noël Stierlin; Martin J. Loessner; Mathias Schmelcher
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Lead DEAD/H box helicase biomarkers with the therapeutic potential identified by integrated bioinformatic approaches in lung cancer Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-28 Yuxin Cui; Adam Hunt; Zhilei Li; Emily Birkin; Jane Lane; Fiona Ruge; Wen G. Jiang
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Secrete or perish: The role of secretion systems in Xanthomonas biology Comput. Struct. Biotechnol. J. (IF 6.018) Pub Date : 2020-12-18 Cristina E. Alvarez-Martinez; Germán G. Sgro; Gabriel G. Araujo; Mateus R.N. Paiva; Bruno Y. Matsuyama; Cristiane R. Guzzo; Maxuel O. Andrade; Chuck S. Farah