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Interacting effects of land use type, microbes and plant traits on soil aggregate stability Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-03 Luis Merino-Martín; Alexia Stokes; Hyun S. Gweon; Lur Moragues-Saitua; Siobhan Staunton; Claude Plassard; Anna Oliver; Yves Le Bissonnais; Robert I. Griffiths
Soil aggregates are critical to soil functionality, but there remain many uncertainties with respect to the role of biotic factors in forming aggregates. Understanding the interacting effects of soil, land use type, vegetation and microbial communities is a major challenge that needs assessment in both field and controlled laboratory conditions, as well as in bulk and rhizosphere soils. To address
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Priming, stabilization and temperature sensitivity of native SOC is controlled by microbial responses and physicochemical properties of biochar Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-15 Guanhong Chen; Yunying Fang; Lukas Van Zwieten; Yingxue Xuan; Ehsan Tavakkoli; Xiaojie Wang; Renduo Zhang
Biochars generally result in short-term positive priming of native soil organic carbon (SOC), but longer-term carbon (C) stabilization, and these effects can be altered by global warming. However, uncertainty remains about the mechanisms associated with these priming effects, temperature sensitivity of native SOC, and microbial responses to biochars of differing properties. To address these knowledge
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What are the products of enzymatic cleavage of organic N? Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-22 Charles Warren
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Seasonality of gross ammonification and nitrification altered by precipitation in a semi-arid grassland of Northern China Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-22 Nannan Wang; Lei Li; Michael Dannenmann; Yukun Luo; Xiaohui Xu; Bingwei Zhang; Shiping Chen; Kuanhu Dong; Jianhui Huang; Xiaofeng Xu; Changhui Wang
Gross ammonification (GA) and gross nitrification (GN) are key regulators of the bioavailability of nitrogen (N) in terrestrial ecosystems. In arid and semi-arid grassland ecosystems, the impacts of precipitation change on in situ GA and GN and their seasonal variations are understudied. A manipulative experiment with five precipitation levels (-60%, -30%, unchanged ambient precipitation as control
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Nodule-associated bacteria alter the mutualism between arbuscular mycorrhizal fungi and N2 fixing bacteria Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-21 Silmar Primieri; Júlio César Pires Santos; Pedro Madeira Antunes
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Long-term experimental warming and fertilization have opposing effects on ectomycorrhizal root enzyme activity and fungal community composition in Arctic tundra Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-21 Haley R. Dunleavy; Michelle C. Mack
As the Arctic rapidly warms, deciduous ectomycorrhizal (EcM) shrubs are expanding across the tundra. While we know how EcM host plants respond to warming and the associated nutrient release predicted for a future Arctic, considerably less is known about how EcM function will respond, despite their important role in plant nutrient acquisition in the nutrient-limited tundra. To explore how EcM-associated
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Energetic supply regulates heterotrophic nitrogen fixation along a glacial chronosequence Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-21 Jipeng Wang; Yanhong Wu; Jingji Li; Qingqing He; He Zhu; Haijian Bing
Ice-free areas are expanding on the Tibetan Plateau and in its surroundings, and these recently exposed lands are typically deficient in nitrogen (N). Free-living N fixation (FLNF) represents a vital source of N input, especially when symbiotic N-fixing plants are absent. However, we know little about how FLNF changes with ecosystem succession after glacier retreat. In 2018, we measured the potential
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Manure-based biochar decreases heterotrophic respiration and increases gross nitrification rates in rhizosphere soil Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-21 Prem Pokharel; Le Qi; Scott X. Chang
This study hypothesized that pyrolyzed manure pellet (biochar) reduces heterotrophic respiration and N2O emissions from wheat (Triticum aestivum L.) rhizosphere soil by affecting net and gross nitrogen (N) transformation rates and the effects differ between rhizosphere and bulk soils. The biochar significantly decreased heterotrophic respiration but not N2O emissions, while unpyrolyzed manure pellets
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Short-term toxicity assessment of a triazine herbicide (terbutryn) underestimates the sensitivity of soil microorganisms Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-07 David Fernández-Calviño; Johannes Rousk; Erland Bååth; Ulla E. Bollmann; Kai Bester; Kristian K. Brandt
Little is known about the impacts of persistent triazine herbicides and biocides on soil microorganisms. Terbutryn toxicity in soil microorganisms was studied using bacterial and fungal growth, substrate induced respiration (SIR) and basal respiration as ecotoxicological end-points. In the short-term (0–7 days), increasing concentrations of terbutryn (0–800 mg kg−1) progressively inhibited bacterial
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Phosphorus source and Epichloë coenophiala strain interact over time to modify tall fescue rhizosphere microbial community structure and function Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-19 Na Ding; Haichao Guo; Joseph V. Kupper; David H. McNear
Symbiosis between the fungal endophyte Epichloë coenophiala naturally found in the cool season grass tall fescue (Lolium arundinacea (Schreb) Darbysh.) is thought to provide a competitive advantage over endophyte-free grasses when grown under nutrient-limited conditions. The mechanisms involved in the purported improvement in phosphorus (P) uptake due to endophyte infection are still not understood
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Soil aggregate size-dependent relationships between microbial functional diversity and multifunctionality Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-19 Shun Han; Manuel Delgado-Baquerizo; Xuesong Luo; Yurong Liu; Joy D. Van Nostrand; Wenli Chen; Jizhong Zhou; Qiaoyun Huang
Soil stability and aggregates are important drivers of soil fertility and microbial diversity and are highly vulnerable to land degradation. However, the role of soil aggregates in driving the responses of microbial functional diversity and multiple ecosystem services and functions (multifunctionality) to further degradation (e.g., fertilization) remains largely unexplored and poorly understood. In
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Changes in assembly processes of soil microbial communities during secondary succession in two subtropical forests Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-19 Lan Liu; Kai Zhu; Sascha M.B. Krause; Shaopeng Li; Xin Wang; Zhaochen Zhang; Mengwei Shen; Qingsong Yang; Juyu Lian; Xihua Wang; Wanhui Ye; Jian Zhang
Soil microbes play critical roles in re-establishing plant diversity and ecosystem functioning after disturbance events. However, the influence of deterministic and stochastic processes in shaping microbial community assembly during long-term ecosystem recovery are poorly understood. We characterized soil prokaryotic and fungal communities along two chronosequences ranging from early to later successional
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Rhizosphere response to predicted vegetation shifts in boreal forest floors Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-19 Sarah J. Thacker; Sylvie A. Quideau
The boreal forest is the single largest terrestrial store of carbon on Earth, and approximately a quarter of these carbon stocks are found in the forest floor. With climate change, vegetation shifts are expected in the boreal. In Western Canada, aspen-dominated stands will replace conifers. In this study, we investigated how these vegetation shifts could affect the composition and function of soil
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Carbon stability in a Scottish lowland raised bog: potential legacy effects of historical land use and implications for global change Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-05 Heike Schimmel; Melanie Braun; Jens-Arne Subke; Wulf Amelung; Roland Bol
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Microbial carbon use efficiency, biomass residence time and temperature sensitivity across ecosystems and soil depths Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-24 Jinquan Li; Junmin Pei; Feike A. Dijkstra; Ming Nie; Elise Pendall
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Cyanobacteria in early soil development of deglaciated forefields: Dominance of non-heterocytous filamentous cyanobacteria and phosphorus limitation of N-fixing Nostocales Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-05 Joseph E. Knelman; Steve K. Schmidt; Emily B. Graham
Cyanobacteria are integral to soil development in the earliest stages of primary succession by fixing carbon (C) and nitrogen (N) essential for organismal growth. In this study, we examined soil cyanobacterial communities at the earliest stage of succession (<5 years) at two disparate glacial forefields to reveal cyanobacterial patterns central to ecosystem development. Despite vast differences in
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Shifts in root and soil chemistry drive the assembly of belowground fungal communities in tropical land-use systems Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-15 Johannes Ballauff; Dominik Schneider; Nur Edy; Bambang Irawan; Rolf Daniel; Andrea Polle
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Sulfate addition and rising temperature promote arsenic methylation and the formation of methylated thioarsenates in paddy soils Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-07 Chuan Chen; Baoyun Yang; Yang Shen; Jun Dai; Zhu Tang; Peng Wang; Fang-Jie Zhao
Microbe-mediated arsenic (As) methylation is enhanced when paddy soils are flooded, producing primarily dimethylarsinic acid (DMA) that is phytotoxic and can induce rice straighthead disease. Thiolation of DMA produces methylated thioarsenate compounds such as di-methylated monothioarsenate (DMMTA) and di-methylated dithioarsenate (DMDTA), the former is highly toxic to humans. In the present study
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Gene analysis reveals that leaf litter from Epichloë endophyte-infected perennial ryegrass alters diversity and abundance of soil microbes involved in nitrification and denitrification Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-07 Zhenjiang Chen; Yuanyuan Jin; Xiang Yao; Xuekai Wei; Xiuzhang Li; Chunjie Li; James F. White; Zhibiao Nan
Although Epichloë endophytes are present only in aboveground tissues of grasses they indirectly influence soil biological characteristics through increased litter incorporation and root exudation. Epichloë endophytes have been reported to affect the decomposition rates of litter by altering litter quality and microbial decomposers to affect soil characteristics. However, it is not well-studied that
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Iron-bound carbon increases along a freshwater−oligohaline gradient in a subtropical tidal wetland Soil Biol. Biochem. (IF 5.795) Pub Date : 2021-01-04 Jing Bai; Min Luo; Yang Yang; Shuyao Xiao; Zhifeng Zhai; Jiafang Huang
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Soil amendments change bacterial functional genes more than taxonomic structure in a cadmium-contaminated soil Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-30 Min Xu; Xiuli Hao; Zhenqian Xiong; Hao Liao; Li Wang; Tianyuan Zhang; Xuesong Luo; Wenli Chen; Qiaoyun Huang
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Soil biota response to experimental rainfall reduction depends on the dominant tree species in mature northern Mediterranean forests Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-23 Adriane Aupic-Samain; Mathieu Santonja; Mathilde Chomel; Susana Pereira; Elodie Quer; Caroline Lecareux; Jean-Marc Limousin; Jean-Marc Ourcival; Guillaume Simioni; Thierry Gauquelin; Catherine Fernandez; Virginie Baldy
Soil organisms play a major role on litter decomposition process and nutrient cycling in forest ecosystems. These organisms are extremely sensitive to environmental conditions such as soil temperature and moisture conditions which control their demographic parameters and activity. The ongoing climate change can therefore directly affect soil biota communities and the processes they drive. Besides,
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Increasing environmental filtering of diazotrophic communities with a decade of latitudinal soil transplantation Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-23 Haoqi Tang; Na Zhang; Haowei Ni; Xiaofeng Xu; Xiaoyue Wang; Yueyu Sui; Bo Sun; Yuting Liang
Biological nitrogen fixation is an important process to reduce fertilizer application in agriculture ecosystem. However, with accelerated climate warming, it is still unknown how diazotrophs (nitrogen fixing microorganisms) succeed and assemble in long-term field-based experiment. By southward translocating arable Mollisols to a warm-temperate region for a decade to simulate changing climatic regimes
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Shrub encroachment affects tundra ecosystem properties through their living canopy rather than increased litter inputs Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-24 Daniela Aguirre; Alejandro E. Benhumea; Jennie R. McLaren
Deciduous shrub encroachment in tundra ecosystems affects the soil microclimate and, in turn, could affect soil nutrients and microbial processes. Although numerous effects of shrubs on tundra ecosystem properties have been described, there has been little focus on the mechanisms through which they impact tundra functioning. In alpine tundra of northern Canada, we examined 1) the effects of the living
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Litter quality drives nitrogen release, and agricultural management (organic vs. conventional) drives carbon loss during litter decomposition in agro-ecosystems Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-21 L.B. Martínez-García; G.W. Korthals; L. Brussaard; G. Mainardi; G.B. De Deyn
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Global patterns and associated drivers of priming effect in response to nutrient addition Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-22 Jiguang Feng; Biao Zhu
Priming effect (PE) induced by inputs of fresh carbon plays crucial roles in soil organic matter decomposition and terrestrial carbon cycling. Priming effect is considered to be largely influenced by nutrient availability, but the global-scale patterns reflecting how nutrient addition affects PE and the controlling factors for such effects remain unclear. By conducting a meta-analysis of 355 observations
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Glomalin – Truths, myths, and the future of this elusive soil glycoprotein Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-22 Jiří Holátko; Martin Brtnický; Jiří Kučerík; Michala Kotianová; Jakub Elbl; Antonín Kintl; Jindřich Kynický; Oldřich Benada; Rahul Datta; Jan Jansa
The term “Glomalin” was originally used to describe a hypothetical gene product of arbuscular mycorrhizal fungi (AMF) that was assumed to be a nearly ubiquitous, thermostable and highly recalcitrant glycoprotein, deposited in soils in large amounts, and deemed to indicate soil health and quality. It was defined operationally as the fraction of soil organic matter (SOM) extractable by a hot citrate
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Succession of the composition and co-occurrence networks of rhizosphere microbiota is linked to Cd/Zn hyperaccumulation Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-23 Jipeng Luo; Xinyu Guo; Qi Tao; Jinxing Li; Yuankun Liu; Yilin Du; Yuying Liu; Yongchao Liang; Tingqiang Li
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Temperature and soil management effects on carbon fluxes and priming effect intensity Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-30 Raphaël Guttières; Naoise Nunan; Xavier Raynaud; Gérard Lacroix; Sébastien Barot; Pierre Barré; Cyril Girardin; Bertrand Guenet; Jean-Christophe Lata; Luc Abbadie
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Tradeoffs among microbial life history strategies influence the fate of microbial residues in subtropical forest soils Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-15 Pengshuai Shao; Laurel Lynch; Hongtu Xie; Xuelian Bao; Chao Liang
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Calculation of fungal and bacterial inorganic nitrogen immobilization rates in soil Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-15 Xiaobo Li; Hongbo He; Xudong Zhang; Caner Kazanci; Zhian Li; Magdalena Necpalova; Qianqian Ma
Microbial inorganic nitrogen (N) immobilization is an important mechanism in the retention of N in soils. However, as a result of the high diversity and complexity of soil microorganisms, there is still no effective approach to measuring the respective immobilization rates of inorganic N by fungi and bacteria, which are the two dominant microbial communities in soils. We propose a mathematical framework
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Microbial communities in crop phyllosphere and root endosphere are more resistant than soil microbiota to fertilization Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-15 Anqi Sun; Xiao-Yan Jiao; Qinglin Chen; Ai-Lian Wu; Yong Zheng; Yong-Xin Lin; Ji-Zheng He; Hang-Wei Hu
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How microbes can, and cannot, be used to assess soil health Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-11 Noah Fierer; Stephen A. Wood; Clifton P. Bueno de Mesquita
Healthy soils are critical to the health of ecosystems, economies, and human populations. Thus, it is widely acknowledged that soil health is important to quantify, both for assessment and as a tool to help guide management strategies. What is less clear is how soil health should actually be measured, especially considering that soil health is not exclusively a product of soil physical and chemical
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When the going gets tough: Emergence of a complex methane-driven interaction network during recovery from desiccation-rewetting Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-11 Thomas Kaupper; Lucas W. Mendes; Hyo Jung Lee; Yongliang Mo; Anja Poehlein; Zhongjun Jia; Marcus A. Horn; Adrian Ho
Microorganisms interact in complex communities, affecting microbially-mediated processes in the environment. Particularly, aerobic methanotrophs showed significantly stimulated growth and activity in the presence of accompanying microorganisms in an interaction network (interactome). Yet, little is known of how the interactome responds to disturbances, and how community functioning is affected by the
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Amazon deforestation enriches antibiotic resistance genes Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-13 Leandro Nascimento Lemos; Alexandre Pedrinho; Ana Tereza Ribeiro de Vasconcelos; Siu Mui Tsai; Lucas William Mendes
The expansion of livestock production and agriculture is responsible for the increase of deforestation rates in the Amazon rainforest, with consequences to climate and micro and macro biodiversity. Although many studies have evaluated the effects of deforestation on the microbiome, its effect on the soil resistome remains unknown. Considering that antibiotic resistance genes (ARGs) are a threat to
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Oxygen availability determines key regulators in soil organic carbon mineralisation in paddy soils Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-03 Yuhong Li; Muhammad Shahbaz; Zhenke Zhu; Yangwu Deng; Yaoyao Tong; Liang Chen; Jinshui Wu; Tida Ge
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Modeling temperature sensitivity of soil organic matter decomposition: Splitting the pools Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-04 Moritz Laub; Rana Shahbaz Ali; Michael Scott Demyan; Yvonne Funkuin Nkwain; Christian Poll; Petra Högy; Arne Poyda; Joachim Ingwersen; Sergey Blagodatsky; Ellen Kandeler; Georg Cadisch
The direction and magnitude of change of soil organic carbon (SOC) stocks due to global warming depend strongly on the temperature sensitivity (e.g., Q10) of carbon mineralization. To date, most multi-pool SOC models assume a general Q10 of 2 despite experimental evidence suggesting different Q10 for different carbon fractions. The aim of this study was to test if the use of experimentally derived
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Soil fungal diversity and functionality are driven by plant species used in phytoremediation Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-30 Marta Gil-Martínez; Álvaro López-García; María T. Domínguez; Rasmus Kjøller; Carmen M. Navarro-Fernández; Søren Rosendahl; Teodoro Marañón
Soil biodiversity loss due to pollution may affect ecosystem services negatively. This environmental problem may be solved by phytoremediation, which is an effective strategy to manage and remediate contaminated areas. During this remediation process, the establishment of plant communities may improve soil fungal community structure and, in particular, may favour mycorrhizal symbiotic associations
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Nitrogen-induced acidification plays a vital role driving ecosystem functions: Insights from a 6-year nitrogen enrichment experiment in a Tibetan alpine meadow Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-03 Fei Yang; Zhilong Zhang; Albert Barberán; Yi Yang; Shuijin Hu; Hui Guo
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Antecedent conditions determine the biogeochemical response of coastal soils to seawater exposure Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-30 Aditi Sengupta; James C. Stegen; Ben Bond-Lamberty; Albert Rivas-Ubach; Jianqiu Zheng; Pubudu P. Handakumbura; Cooper Norris; Matthew J. Peterson; Steven B. Yabusaki; Vanessa L. Bailey; Nicholas D. Ward
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Warming threatens the microbial communities in middle-high latitude peatland: Evidence from testate amoebae Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-12-02 Lihong Song; Liang Chang; Shaoqing Zhang; Yongjing Dou; Donghui Wu
Testate amoebae contribute significantly to belowground ecological processes like nutrient cycling, but a decline in their nutrient cycling functions in peatlands is expected due to global climate warming. We studied the dynamics of testate amoebae communities in relation to soil environmental variables in a permafrost peatland that experienced in situ experimental warming for a 7-yr period. Experimental
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Electron shuttles facilitate anaerobic methane oxidation coupled to nitrous oxide reduction in paddy soil Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-25 Yaohong Zhang; Fangyuan Wang; Zhongjun Jia
Anaerobic oxidation of methane (AOM) coupled with simultaneous consumption of nitrous oxide (N2O) has been recently reported, but the underlying coupling mechanism remains unclear. Here, we investigated N2O-mediated AOM in paddy soil under amendment of electron shuttles (anthraquinone-2,6-disulphonate and methylviologen). Sixty-day anaerobic incubation showed that N2O-mediated AOM occurred in paddy
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Mycorrhizal fungi and phosphatase involvement in rhizosphere phosphorus transformations improves plant nutrition during subtropical forest succession Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-27 Yang Liu; Guihua Zhang; Xianzhen Luo; Enqing Hou; Mianhai Zheng; Lingling Zhang; Xianjin He; Weijun Shen; Dazhi Wen
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Organic amendments drive shifts in microbial community structure and keystone taxa which increase C mineralization across aggregate size classes Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-12 Xiaoyue Wang; Qing Bian; Yuji Jiang; Lingyue Zhu; Yan Chen; Yuting Liang; Bo Sun
Organic amendments can stimulate soil organic carbon (SOC) mineralization and soil aggregation simultaneously, which can improve C sequestration and soil fertility. However, the microbial mechanism governing C mineralization at the aggregate level remains uncertain. Here, we investigate how long-term organic amendments change SOC mineralization via affecting the microbial community composition and
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Warming and microbial uptake influence the fate of added soil carbon across a Hawai'ian weathering gradient Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-23 Avishesh Neupane; Sasha C. Reed; Daniela F. Cusack
Tropical forest soils contain some of the largest carbon (C) stocks on Earth, yet the effects of warming on the fate of fresh C entering tropical soils are still poorly understood. This research sought to understand how the fate of fresh C entering soils is influenced by warming, soil weathering status, and C chemistry. We hypothesized that compounds that are quickly incorporated into microbial biomass
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Repeated drying and rewetting differently affect abiotic and biotic soil phosphorus (P) dynamics in a sandy soil: A 33P soil incubation study Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-23 Hao Chen; Klaus A. Jarosch; Éva Mészáros; Emmanuel Frossard; Xiaorong Zhao; Astrid Oberson
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Shining new light into soil systems: Spectroscopy in microfluidic soil chips reveals microbial biogeochemistry Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-23 Milda Pucetaite; Pelle Ohlsson; Per Persson; Edith Hammer
Microfluidic soil chips render optical access to the naturally opaque soil systems and enable direct investigation of microbial growth and interactions in micro-structurally and chemically controlled environments. However, chemical analyses of these interactions at high spatial and temporal resolution are still lacking. Here we propose that the use of advanced microspectroscopy techniques, namely infrared
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Abiotic and biotic drivers of microbial respiration in peat and its sensitivity to temperature change Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-18 Qian Li; Fabien Leroy; Renata Zocatelli; Sébastien Gogo; Adrien Jacotot; Christophe Guimbaud; Fatima Laggoun-Défarge
The effect of climate change on peatlands is of great importance due to their large carbon stocks. In this study, we examined microbial biomass and effect of temperature and O2 availability on soil respiration of surface and subsurface Sphagnum peat. The interactive effect of biotic and abiotic factors significantly affects soil respiration. Increasing temperature enhanced the microbial respiratory
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Nitrogen addition alters composition, diversity, and functioning of microbial communities in mangrove soils: An incubation experiment Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-18 Hayley Craig; Rachael E. Antwis; Irene Cordero; Deborah Ashworth; Clare H. Robinson; Todd Z. Osborne; Richard D. Bardgett; Jennifer K. Rowntree; Loraé T. Simpson
Mangrove ecosystems are important for carbon storage due to their high productivity and low decomposition rates. Waterways have experienced increased nutrient loads as a result of anthropogenic activities and it is unclear how this may affect carbon and nutrient cycles in downstream mangroves that receive these nutrient-rich waters. Using a laboratory-based incubation experiment, this study aimed to
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Active phoD-harboring bacteria are enriched by long-term organic fertilization Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-19 Wenbo Liu; Ning Ling; Gongwen Luo; Junjie Guo; Chen Zhu; Qicheng Xu; Manqiang Liu; Qirong Shen; Shiwei Guo
PhoD harboring microorganisms are crucial for the regulation of soil phosphorus (P) cycling through the secretion of alkaline phosphomonoesterases and are also known to be sensitive to fertilizer inputs. However, the impacts of long-term mineral and organic fertilizer inputs on active phoD-harboring functional communities in soils remain largely unknown. In the present study, 18O-DNA-stable isotope
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Climate warming negates arbuscular mycorrhizal fungal reductions in soil phosphorus leaching with tall fescue but not lucerne Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-18 Haiyang Zhang; Jeff R. Powell; Jonathan M. Plett; Amber C. Churchill; Sally A. Power; Catriona A. Macdonald; Vinod Jacob; Gilwon Kim; Elise Pendall; David Tissue; Karen M. Catunda; Chioma Igwenagu; Yolima Carrillo; Ben D. Moore; Ian C. Anderson
Nutrient losses due to leaching from agricultural soils can be substantial but, in some cases, soil microbes such as arbuscular mycorrhizal (AM) fungi can buffer those losses. An important knowledge gap, however, is the extent to which climate change may affect AM fungal mediation of leaching via warming and drought. To investigate this, we grew lucerne (Medicago sativa) and tall fescue (Festuca arundinacea)
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Soil organic carbon becomes newer under warming at a permafrost site on the Tibetan Plateau Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-18 Ruiying Chang; Shuguang Liu; Leiyi Chen; Na Li; Haijian Bing; Tao Wang; Xiaopeng Chen; Yang Li; Genxu Wang
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Substrate spatial heterogeneity reduces soil microbial activity Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-18 Andong Shi; Arjun Chakrawal; Stefano Manzoni; Benjamin M.C. Fischer; Naoise Nunan; Anke M. Herrmann
Soil heterogeneity influences microbial access to substrates and creates habitats varying in substrate concentrations, thus leading to local variations in carbon (C) dynamics. Based on theoretical considerations, we expected that higher heterogeneity would decrease microbial activity. To test this hypothesis, we modified substrate spatial heterogeneity using 3D-printed cylinders with four compartments
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Deterministic selection dominates microbial community assembly in termite mounds Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-18 Qing-Lin Chen; Hang-Wei Hu; Zhen-Zhen Yan; Chao-Yu Li; Bao-Anh Thi Nguyen; An-Qi Sun; Yong-Guan Zhu; Ji-Zheng He
Termite mounds are an important habitat for an enormous diversity of microorganisms. However, the microbial community assembly processes in termite mounds remain unresolved, which impeded our ability to predict the biological functions of these mound-associated microbiota under the global changes. Here we conducted a large-scale investigation in northern Australia to explore biogeographical patterns
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Strong priming of soil organic matter induced by frequent input of labile carbon Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-11 Jie Zhou; Yuan Wen; Lingling Shi; Miles R. Marshall; Yakov Kuzyakov; Evgenia Blagodatskaya; Huadong Zang
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A simple model for partitioning forest soil respiration based on root allometry Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-11 Xin Zhao; Naishen Liang; Jiye Zeng; Azian Mohti
Partitioning soil respiration (Rs) into heterotrophic (Rh) and autotrophic (Ra) compartments is an important first step in understanding the response of soil carbon flux to changes in climate. This is because Rh and Ra respond differently to changing environmental conditions. However, the methods currently used to partition Rs have high costs and large uncertainties. In this study, we developed a simple
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Turnover of gram-negative bacterial biomass-derived carbon through the microbial food web of an agricultural soil Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-11 Tiantian Zheng; Anja Miltner; Chao Liang; Karolina M. Nowak; Matthias Kästner
Soil organic matter (SOM) represents an important terrestrial carbon reservoir in the biosphere, and microorganisms have been recognized as significant material contributors to the formation of SOM. However, the turnover of microbial biomass residues with respect to their detailed microbial food web remains elusive. To elucidate this turnover process, we traced the fate of Gram-negative (Gram−) microbial
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Assessing the impact of long-term soil phosphorus on N-transformation pathways using 15N labelling Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-10 R.M. O'Neill; D.J. Krol; D. Wall; G.J. Lanigan; F. Renou-Wilson; K.G. Richards; A.B. Jansen-Willems; C. Müller
A laboratory incubation study was conducted on a temperate grassland soil to quantify the main mineral nitrogen (N) transformation rates and pathways via a15N tracing approach. Soil samples were taken from a long-term phosphorus (P) trial to investigate the effects on gross N transformations under high and low phosphorus amendment. The soils were incubated over a 2-week period and treated with ammonium-nitrate
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Effects of disturbance to moss biocrusts on soil nutrients, enzyme activities, and microbial communities in degraded karst landscapes in southwest China Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-09 Cai Cheng; Min Gao; Yuandong Zhang; Mingzhong Long; Yunjie Wu; Xiaona Li
Biocrusts are ecosystem engineers providing vital functions and services on the Earth's land surface, while biocrust ecology in degraded karst landscapes has not yet been well understood. Herein, we aim to address this research gap by comparing the differences of soil nutrients, extracellular enzyme activities, and microbial communities between intact crusts and moss-free crusts in a degraded ecosystem
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Herb litter mediates tree litter decomposition and soil fauna composition Soil Biol. Biochem. (IF 5.795) Pub Date : 2020-11-07 Bin Wang; Kris Verheyen; Lander Baeten; Pallieter De Smedt