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Genetic comparison of planted and natural Quercus robur stands in Russia Silvae Genet. (IF 1.111) Pub Date : 2020-12-25 Bernd Degen; Yulai Yanbaev; Celine Blanc-Jolivet; Ruslan Ianbaev; Svetlana Bakhtina; Malte Mader
Genetic diversity and the optimal genetic composition are essential for the adaptability and adaptation of tree populations. Artificial regeneration of stands might reduce the genetic diversity and increase family structures if the seeds were collected from a limited number of mother trees. We did a genetic inventory in 12 pedunculate oak stands in Russia using a set of 366 nuclear gene markers (361
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Recent clonal reproduction of Cryptomeria japonica in a snowy region revealed by a survey of small-sized ramets Silvae Genet. (IF 1.111) Pub Date : 2020-12-17 Megumi K. Kimura; Takashi Nagashima; Tomohiko Kamitani; Hitoshi Sakio; Yoshihiko Tsumura
Clonal reproduction may contribute to population maintenance in areas where disturbance caused by snow limits tree recruitment. To understand the importance of clonal reproduction in the population dynamics of canopy tree species, it is necessary to determine the frequency of clonal reproduction in the early stages of seedling establishment. We found 106 ramets, including “small-sized” ramets of less
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Genetic diversity of marginal populations of Populus euphratica Oliv. from highly fragmented river ecosystems Silvae Genet. (IF 1.111) Pub Date : 2020-12-17 Çiğdem Kansu; Zeki Kaya
Populus euphratica Oliv. (Euphrates poplar) is one of the naturally distributed poplar species and limited to south and southwestern Turkey. The species possesses great importance for both renewable energy resources and persistence of a healthy river ecosystem. Due to increased habitat destructions and fragmentation by human activities, the distribution area of this species has become narrower. Hence
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Clonal variation in phenological synchronization and cone production in a Pinus patula seed orchard Silvae Genet. (IF 1.111) Pub Date : 2020-11-18 Liliana Muñoz-Gutiérrez; J. Jesús Vargas-Hernández; Javier López-Upton; Carlos Ramírez-Herrera; Marcos Jiménez-Casas
Synchronization between female receptiveness and pollen dispersal, and fecundity of clones influence effective population size and genetic diversity of germplasm produced in seed orchards. Our objective was to determine clonal variation in phenological synchronization and in cone production in a Pinus patula seed orchard. Two-year phenology data of female and male strobili from a sample of 31 clones
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Effect of witches’ broom mutation on growth of Pinus sibirica seedlings Silvae Genet. (IF 1.111) Pub Date : 2020-11-06 Galina V. Vasilyeva; Evgeniya A. Zhuk; Sergey N. Goroshkevich
Mutational witches’ brooms (WB) spontaneously arise in the tree crown. There are no male cones in Pinus sibirica WB and pollination always occurs with normal pollen. We studied 2-year-old seed progeny obtained from open-pollinated cones of WB and normal crown (NC) pines. There were significant morphological differences in two pairs of WB and NC families, while the third family pair studied showed barely
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Development and Characterization of EST-SSR Markers for Juniperus squamata (Cupressaceae), an ecologically important conifer in Asian mountains Silvae Genet. (IF 1.111) Pub Date : 2020-10-10 Tsam Ju; Perla Farhat; Wenjing Tao; Jibin Miao; Jialiang Li; Xiaoyan Fan; Sonam Tso; Kangshan Mao
Juniperus squamata, an endemic conifer of Asia, is an important shrub ecologically and economically. Yet little is known about its genetic diversity and population structure due to lacking of highly polymorphic molecular markers. In this study, expressed sequence tag microsatellite markers (EST-SSR) were developed for Juniperus squamata. Illumina HiSeq data were used to reconstruct the transcriptome
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Reinforced evidence on partial compatibility between Pinus sylvestris and Pinus mugo and on maternal inheritance of chloroplast DNA in the Pinus mugo × Pinus sylvestris cross Silvae Genet. (IF 1.111) Pub Date : 2020-10-05 Andrej Kormutak; Martin Galgoci; Peter Bolecek; Dusan Gőmőry; Jana Libantova
The crossability relationship between Scots pine (Pinus sylvestris L.) and mountain dwarf pine (Pinus mugo Turra) was tested under field conditions using an artificial pollination approach. There was partial compatibility between the parental species, as evidenced by the amount of filled seeds in their reciprocal crossings and in control variants from self-pollination, controlled intraspecific outcrossing
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Cooperative Second-Cycle Breeding and Testing of Coastal Douglas-fir in the US Pacific Northwest: Strategy, Implementation, and Operational Aspects Silvae Genet. (IF 1.111) Pub Date : 2020-08-28 KJS Jayawickrama; TZ Ye
The second cycle of cooperative breeding and testing of coastal Douglas-fir in western Oregon and Washington was started around 1992. By 2020 the bulk of testing is nearing completion, while the latest program in southern Oregon and NW California is scheduled to run through 2035. A total of 109 first-generation programs were consolidated into nine second- cycle breeding and testing cooperatives (with
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Usage of microsatellite markers for characterization of polyploids: a case study in reference to hexaploid bamboo species Silvae Genet. (IF 1.111) Pub Date : 2020-08-24 Rajendra K. Meena; Maneesh S. Bhandari; Harish S. Ginwal
Microsatellite markers are most valuable tools for characterization of plant genetic resources or population genetic analysis. Since they are codominant and allelic markers, utilizing them in polyploid species remained doubtful. In such cases, microsatellite markers are usually analyzed by treating them as dominant marker. In the current study, it has been showed that despite of losing the advantage
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Chloroplast microsatellites reveal genetic diversity and population structure in natural populations of Himalayan Cedar (Cedrus deodara (Roxb.) G. Don) in India Silvae Genet. (IF 1.111) Pub Date : 2020-08-24 H. S. Ginwal; Rajesh Sharma; Priti Chauhan; Kirti Chamling Rai; Santan Barthwal
Himalayan cedar (Cedrus deodara) is one of the most important temperate timber species of Western Himalayas and is considered to be among the endangered conifer species in the region. Knowledge of genetic diversity and population structure will help guide gene conservation strategies for this species. Ten polymorphic chloroplast microsatellites (cpSSR) were used to study genetic diversity and population
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Development of novel Quercus rubra chloroplast genome CAPS markers for haplotype identification Silvae Genet. (IF 1.111) Pub Date : 2020-08-20 Tim Pettenkofer; Reiner Finkeldey; Markus Müller; Konstantin V. Krutovsky; Barbara Vornam; Ludger Leinemann; Oliver Gailing
Our main objective was to generate cost-effective chloroplast (cp) DNA markers that are easy to apply and to score. In combination with already published cpSSR markers they should increase haplotype resolution in populations. To discover new cpDNA markers, we sequenced 87-97 % of the entire chloroplast genome (except the second inverted repeat) of 8 trees representing different regions of the Quercus
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The influence of sexual dimorphism on the phenotypical properties of poplar Silvae Genet. (IF 1.111) Pub Date : 2020-08-07 Anatoly Tsarev
The influence of sexual dimorphism on commercial-biological traits of the most widespread poplar of the world Populus tremula L. in the Central forest-steppe of the European territory of Russia was studied. The analysis was made of the distribution of male and female clones in general, the effects of humidity, the richness of the soil, and surrounding vegetation on their productive capacity as well
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Marker-assisted selection in C. oleifera hybrid population Silvae Genet. (IF 1.111) Pub Date : 2020-07-13 Jin-Ling Feng; Ying Jiang; Zhi-Jian Yang; Shi-Pin Chen; Yousry A. El-Kassaby; Hui Chen
Marker-assisted selection (MAS) is implemented to improve Camellia oleifera yield and fruit attributes for meeting China’s increased demand for new varieties development. We conducted three-generational (G0, G1, and G2) hybridization (diallel mating) and selection experiment and used Sequence-Related Amplified Polymorphism (SRAP). SRAP markers to investigate their utility in a MAS framework. The utilized
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Genetic diversity and structure of Oriental and European beech populations from Iran and Europe Silvae Genet. (IF 1.111) Pub Date : 2020-07-13 Mahboobeh Mohebi Bijarpasi; Markus Müller; Oliver Gailing
Genetic variation is a major component of plant development and adaptation, and recent studies have shown that genetic variation among plant species can have important ecological effects. Oriental beech (Fagus orientalis Lipsky) is a dominant tree species in the Hyrcanian forests, where it occupies approximately 18 % of the forested area. In this study, nine expressed sequence tag simple sequence repeat
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Morphological and molecular characterization of a hybrid zone between Prosopis alba and P. nigra in the Chaco region of northwestern Argentina Silvae Genet. (IF 1.111) Pub Date : 2020-06-27 Carmen Delcira Vega; Ingrid Teich; Maria Cristina Acosta; Diego Lopez Lauenstein; Aníbal Ramón Verga; Andrea Cosacov
The Gran Chaco is the largest dry forest in South America. One of the key taxa of this biome is the genus Prosopis (Fabaceae) which contains several economically important species. One of the characteristics of this genus is its natural capacity to exchange genetic information among congeneric species, generating zones of high morphological and genetic variability at contact points. The study and management
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Repeatability of growth characteristics and wood properties for solid wood production from Eucalyptus camaldulensis half-sib families growing in Thailand Silvae Genet. (IF 1.111) Pub Date : 2020-05-26 Ikumi Nezu; Futoshi Ishiguri; Haruna Aiso; Sapit Diloksumpun; Jyunichi Ohshima; Kazuya Iizuka; Shinso Yokota
To promote solid wood production, the diameter at breast height, height, stress-wave velocity, surface-released strain, basic density and compressive strength parallel to the grain were measured for 10 half-sib families of 12-year-old Eucalyptus camaldulensis Dehnh. trees growing in Thailand. Based on the results, growth rates, correlations among measured properties, radial and among-family variations
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Gene-Targeted markers to assess genetic diversity and population structure within Tunisian Phoenix dactylifera L. cultivars Silvae Genet. (IF 1.111) Pub Date : 2020-04-22 Rhouma-Chatti Soumaya; Choulak Sarra; Moussa Maha; Chatti Khaled; Chatti Noureddine
Genetic variability in date palm genotypes collected from different regions of southern Tunisia was analyzed using a Start Codon Targeted (SCoT) marker system. Thirty-one accessions collected from three locations were investigated. One hundred and nine amplicons were produced among which 84 % were polymorphic. The PIC value and the Rp values testified of the efficiency of used primers. The percentage
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Genetic structure of ural populations of Larix sibirica Ledeb. on the base of analysis of nucleotide polymorphism Silvae Genet. (IF 1.111) Pub Date : 2020-04-06 Yu. S. Vasilyeva; A. A. Zhulanov; S. V. Boronnikova; Yu. A. Yanbaev
Research on the state and dynamics of the gene pool (an important natural resource that determines the potential fitness of living organisms and, ultimately, their long-term survival) becomes an important problem in the context of increased anthropogenic environmental impact. They are especially important for key species of ecosystems of a global scale importance. Larix sibirica Ledeb., which spreads
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Chromosome Numbers in Gymnosperms - An Update Silvae Genet. (IF 1.111) Pub Date : 2020-03-03 Shubhi Rastogi; Deepak Ohri
The present report is based on a cytological data base on 614 (56.0 %) of the total 1104 recognized species and 82 (90.0 %) of the 88 recognized genera of gymnosperms. Family Cycadaceae and many genera of Zamiaceae show intrageneric uniformity of somatic numbers, the genus Zamia is represented by a range of number from 2n=16-28. Ginkgo, Welwitschia and Gentum show 2n=24, 2n=42, and 2n=44 respectively
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Genetic control of coppice regrowth in Eucalyptus spp. Silvae Genet. (IF 1.111) Pub Date : 2020-02-04 Marcos Rafael Amâncio; Fernanda Bortolanza Pereira; João Gabriel Zanon Paludeto; Amanda Roberta Vergani; Odair Bison; Fabiana Schmidt Bandeira Peres; Evandro Vagner Tambarussi
Forest companies prefer a coppice system as a silvicultural strategy owing to its economic and sustainability advantages compared to developing new plantations for second rotations. However, studies aiming to determine the selection of superior genetic material for this management strategy are scarce. In this study, we evaluated five clonal tests of Eucalyptus spp. located in Itatinga and Angatuba
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Development of EST microsatellite markers for the Tasmanian palaeoendemic conifer Lagarostrobos franklinii (Hook. f.) Quinn (Podocarpaceae) Silvae Genet. (IF 1.111) Pub Date : 2020-01-21 James R. Marthick; Matthew J. Larcombe; James R. P. Worth
Nuclear Expressed Sequence Tag (EST) microsatellite markers were developed for the Tasmanian palaeoendemic conifer Lagarostrobos franklinii (Hook.-f.) Quinn for genetic studies. RNAseq data was mined for EST microsatellites, and primer pairs were synthesised from 70 contigs with 50 producing amplification products. Of these 50, 10 reliably amplified and displayed polymorphism across 8 samples representing